RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 PEAR1Q5VY43 1037 aaPredicted RBP6.63□□□□□ -1.35
PTCD3-215ENST00000484203 SLC39A4Q6P5W5 647 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 ZC3H14Q6PJT7 736 aaKnown RBP6.63□□□□□ -1.35
PTCD3-215ENST00000484203 ADAMTSL4Q6UY14 1074 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 DPH6Q7L8W6 267 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 BRSK2Q8IWQ3 736 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 CEP57L1Q8IYX8 460 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 PDILTQ8N807 584 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 FLCNQ8NFG4 579 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 SPPL2BQ8TCT7 592 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 DEPDC1BQ8WUY9 529 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 ATOH1Q92858 354 aaPredicted RBP6.63□□□□□ -1.35
PTCD3-215ENST00000484203 DNASE1L2Q92874 299 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 CCDC47Q96A33 483 aaKnown RBP6.63□□□□□ -1.35
PTCD3-215ENST00000484203 ELSPBP1Q96BH3 223 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 MSANTD3Q96H12 275 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 ANKRD36BP1Q96IX9 119 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 CEP295NLQ96MC4 621 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 GCNAQ96QF7 691 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 HHIPQ96QV1 700 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 C7orf25Q9BPX7 421 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 CORO1BQ9BR76 489 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 FAM213AQ9BRX8 229 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 TRIM9Q9C026 710 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 HAPLN2Q9GZV7 340 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 SCAND2PQ9GZW5 306 aaPredicted RBP6.63□□□□□ -1.35
PTCD3-215ENST00000484203 TRPV4Q9HBA0 871 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 ZFP14Q9HCL3 533 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 NPHS2Q9NP85 383 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 TRPV5Q9NQA5 729 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 ARHGEF3Q9NR81 526 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 RBAKQ9NYW8 714 aaPredicted RBP6.63□□□□□ -1.35
PTCD3-215ENST00000484203 DNMT3BQ9UBC3 853 aaKnown RBP6.63□□□□□ -1.35
PTCD3-215ENST00000484203 RAPGEFL1Q9UHV5 662 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 SIT1Q9Y3P8 196 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 ANKRD63C9JTQ0 380 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 PROB1E7EW31 1015 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 CYB561D2O14569 222 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 MEFVO15553 781 aaPredicted RBP6.62□□□□□ -1.35
PTCD3-215ENST00000484203 TNNC2P02585 160 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 NFICP08651 508 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 TMEM191BP0C7N4 346 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 SLFN14P0C7P3 912 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 MYBP10242 640 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 CDC25CP30307 473 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 LHX1P48742 406 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 AP3M2P53677 418 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 STARD6P59095 220 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 KRT85P78386 507 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 TFAMQ00059 246 aaKnown RBP6.62□□□□□ -1.35
PTCD3-215ENST00000484203 MYL7Q01449 175 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 TWF1Q12792 350 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 PSMD2Q13200 908 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 BECN1Q14457 450 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 PPP2R5DQ14738 602 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 FAM26FQ5R3K3 315 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 CENPPQ6IPU0 288 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 FAM173BQ6P4H8 233 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 ZNF852Q6ZMS4 543 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 UNC13DQ70J99 1090 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 CCDC105Q8IYK2 499 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 GPD1LQ8N335 351 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 TOP6BLQ8N6T0 577 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 TMEM102Q8N9M5 508 aaPredicted RBP6.62□□□□□ -1.35
PTCD3-215ENST00000484203 ITFG1Q8TB96 612 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 LRRC15Q8TF66 581 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 SMARCD2Q92925 531 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 PSMG2Q969U7 264 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 EXOC4Q96A65 974 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 CCDC74AQ96AQ1 378 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 DHX58Q96C10 678 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 FNBP1Q96RU3 617 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 ACBD6Q9BR61 282 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 IER2Q9BTL4 223 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 TRMT61BQ9BVS5 477 aaKnown RBP6.62□□□□□ -1.35
PTCD3-215ENST00000484203 BCO2Q9BYV7 579 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 PANK2Q9BZ23 570 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 GTPBP4Q9BZE4 634 aaKnown RBP6.62□□□□□ -1.35
PTCD3-215ENST00000484203 MUC3BQ9H195 1237 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 SLITRK6Q9H5Y7 841 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 ABCB6Q9NP58 842 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 GDAP2Q9NXN4 497 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 OBP2AQ9NY56 170 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 EHD2Q9NZN4 543 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 RCOR1Q9UKL0 485 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 YIPF1Q9Y548 306 aa6.62□□□□□ -1.35
PTCD3-215ENST00000484203 A0A1W2PP55 124 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 KANSL1LA0AUZ9 987 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 KRBA1A5PL33 1030 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 LINC01387J3KSC0 135 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 POLR2DO15514 142 aaKnown RBP6.61□□□□□ -1.35
PTCD3-215ENST00000484203 SEC24AO95486 1093 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 PSMC3P17980 439 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 TRIM21P19474 475 aaKnown RBP6.61□□□□□ -1.35
PTCD3-215ENST00000484203 CMA1P23946 247 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 DDX6P26196 483 aaKnown RBP eCLIP6.61□□□□□ -1.35
PTCD3-215ENST00000484203 MRE11P49959 708 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 PDE6CP51160 858 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 VCPP55072 806 aaKnown RBP6.61□□□□□ -1.35
PTCD3-215ENST00000484203 RPL10AP62906 217 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms