RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 BCO1Q9HAY6 547 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 ATP8A2Q9NTI2 1148 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 ABCF3Q9NUQ8 709 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-214ENST00000483925 ADD3Q9UEY8 706 aaKnown RBP4.94□□□□□ -1.62
PTCD3-214ENST00000483925 RPS6KA6Q9UK32 745 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 CNPY2Q9Y2B0 182 aa4.94□□□□□ -1.62
PTCD3-214ENST00000483925 SOS1Q07889 1333 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-214ENST00000483925 A0A1W2PR48 441 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 hCG_1807616A0A1W2PRN6 198 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 MYO1CO00159 1063 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 RASSF9O75901 435 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 ENO2P09104 434 aaPredicted RBP4.93□□□□□ -1.62
PTCD3-214ENST00000483925 CNPP09543 421 aaKnown RBP4.93□□□□□ -1.62
PTCD3-214ENST00000483925 GYS1P13807 737 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 IL1R1P14778 569 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 DDCP20711 480 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 IL11P20809 199 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 ABCD1P33897 745 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 PNLIPRP1P54315 467 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 BCAT1P54687 386 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 ALDH18A1P54886 795 aaKnown RBP4.93□□□□□ -1.62
PTCD3-214ENST00000483925 CTXN1P60606 82 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 POU6F2P78424 691 aaPredicted RBP4.93□□□□□ -1.62
PTCD3-214ENST00000483925 EXOSC9Q06265 439 aaKnown RBP4.93□□□□□ -1.62
PTCD3-214ENST00000483925 NSUN2Q08J23 767 aaKnown RBP eCLIP4.93□□□□□ -1.62
PTCD3-214ENST00000483925 KLF10Q13118 480 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 SCARB2Q14108 478 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 PRKD1Q15139 912 aaPredicted RBP4.93□□□□□ -1.62
PTCD3-214ENST00000483925 SMAD1Q15797 465 aaKnown RBP4.93□□□□□ -1.62
PTCD3-214ENST00000483925 MST1LQ2TV78 715 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 TCTN3Q6NUS6 607 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 USP49Q70CQ1 688 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 GALNTL5Q7Z4T8 443 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.93□□□□□ -1.62
PTCD3-214ENST00000483925 HSCBQ8IWL3 235 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 PQLC1Q8N2U9 271 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 MPP5Q8N3R9 675 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 PPP1R14CQ8TAE6 165 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 SPSB4Q96A44 273 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 GNRHR2Q96P88 292 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 LMF1Q96S06 567 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 REEP2Q9BRK0 252 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 BTBD2Q9BX70 525 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 ZNF341Q9BYN7 854 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 PCDHAC1Q9H158 963 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 ACAD9Q9H845 621 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 LANCL2Q9NS86 450 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 TMEM140Q9NV12 185 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 ZMYND8Q9ULU4 1186 aaPredicted RBP4.93□□□□□ -1.62
PTCD3-214ENST00000483925 DERAQ9Y315 318 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 ZNF711Q9Y462 761 aa4.93□□□□□ -1.62
PTCD3-214ENST00000483925 KIAA0355O15063 1070 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 FYB1O15117 783 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 FOXS1O43638 330 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 PRAMEF4O60810 478 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 GPR32O75388 356 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 USP1O94782 785 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 ADRB2P07550 413 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 GNAI3P08754 354 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 ATP6V1B1P15313 513 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 BTF3P20290 206 aaKnown RBP4.92□□□□□ -1.62
PTCD3-214ENST00000483925 TGM1P22735 817 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 CSF2RBP32927 897 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 PSMC2P35998 433 aaKnown RBP4.92□□□□□ -1.62
PTCD3-214ENST00000483925 MLH1P40692 756 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 GNAI1P63096 354 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 IFI35P80217 286 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-214ENST00000483925 GPR68Q15743 365 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 CRB2Q5IJ48 1285 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.92□□□□□ -1.62
PTCD3-214ENST00000483925 TMTC4Q5T4D3 741 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 SNX30Q5VWJ9 437 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 CD276Q5ZPR3 534 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 NUGGCQ68CJ6 796 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 GPR139Q6DWJ6 353 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 NAA16Q6N069 864 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-214ENST00000483925 RPUSD3Q6P087 351 aaKnown RBP4.92□□□□□ -1.62
PTCD3-214ENST00000483925 KLHL24Q6TFL4 600 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 KIAA0408Q6ZU52 694 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 Q6ZVL8 140 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 CPLX4Q7Z7G2 160 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 REXO1L1PQ8IX06 675 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 LMNTD2Q8IXW0 634 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 CEP57L1Q8IYX8 460 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 OR7D4Q8NG98 312 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 SCAMP5Q8TAC9 235 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 SMCR8Q8TEV9 937 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-214ENST00000483925 ZNF480Q8WV37 535 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 CFHR4Q92496 578 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 TBC1D5Q92609 795 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 CALML4Q96GE6 196 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 LRRC37BQ96QE4 947 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 C1orf43Q9BWL3 253 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 SEZ6LQ9BYH1 1024 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 HAPLN2Q9GZV7 340 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 OR10A5Q9H207 317 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 ABHD16BQ9H3Z7 469 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 EPS8L2Q9H6S3 715 aa4.92□□□□□ -1.62
PTCD3-214ENST00000483925 GRPEL1Q9HAV7 217 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms