RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 ZNF560Q96MR9 790 aa11.65□□□□□ -0.54
SMARCC1-205ENST00000483847 ARHGEF4Q9NR80 690 aa11.65□□□□□ -0.54
SMARCC1-205ENST00000483847 CALCOCO1Q9P1Z2 691 aa11.65□□□□□ -0.54
SMARCC1-205ENST00000483847 HCN2Q9UL51 889 aa11.65□□□□□ -0.54
SMARCC1-205ENST00000483847 AGAP1Q9UPQ3 857 aa11.65□□□□□ -0.54
SMARCC1-205ENST00000483847 STYXL1Q9Y6J8 313 aa11.65□□□□□ -0.54
SMARCC1-205ENST00000483847 MAST4O15021 2626 aa11.65□□□□□ -0.54
SMARCC1-205ENST00000483847 VWA3AA6NCI4 1184 aa11.64□□□□□ -0.55
SMARCC1-205ENST00000483847 TULP1O00294 542 aaPredicted RBP11.64□□□□□ -0.55
SMARCC1-205ENST00000483847 HUS1O60921 280 aa11.64□□□□□ -0.55
SMARCC1-205ENST00000483847 EIF2DP41214 584 aaKnown RBP11.64□□□□□ -0.55
SMARCC1-205ENST00000483847 PNPLA4P41247 253 aa11.64□□□□□ -0.55
SMARCC1-205ENST00000483847 GRIA2P42262 883 aa11.64□□□□□ -0.55
SMARCC1-205ENST00000483847 WASP42768 502 aa11.64□□□□□ -0.55
SMARCC1-205ENST00000483847 SLC7A9P82251 487 aa11.64□□□□□ -0.55
SMARCC1-205ENST00000483847 TFAMQ00059 246 aaKnown RBP11.64□□□□□ -0.55
SMARCC1-205ENST00000483847 MYL7Q01449 175 aa11.64□□□□□ -0.55
SMARCC1-205ENST00000483847 HNRNPDQ14103 355 aaKnown RBP11.64□□□□□ -0.55
SMARCC1-205ENST00000483847 NAXDQ8IW45 347 aa11.64□□□□□ -0.55
SMARCC1-205ENST00000483847 KCTD17Q8N5Z5 321 aa11.64□□□□□ -0.55
SMARCC1-205ENST00000483847 C1orf127Q8N9H9 656 aa11.64□□□□□ -0.55
SMARCC1-205ENST00000483847 CXorf38Q8TB03 319 aa11.64□□□□□ -0.55
SMARCC1-205ENST00000483847 ERLEC1Q96DZ1 483 aa11.64□□□□□ -0.55
SMARCC1-205ENST00000483847 CRELD1Q96HD1 420 aa11.64□□□□□ -0.55
SMARCC1-205ENST00000483847 CDK5RAP3Q96JB5 506 aa11.64□□□□□ -0.55
SMARCC1-205ENST00000483847 HSPA12BQ96MM6 686 aa11.64□□□□□ -0.55
SMARCC1-205ENST00000483847 ZHX3Q9H4I2 956 aa11.64□□□□□ -0.55
SMARCC1-205ENST00000483847 PARVGQ9HBI0 331 aa11.64□□□□□ -0.55
SMARCC1-205ENST00000483847 CD93Q9NPY3 652 aa11.64□□□□□ -0.55
SMARCC1-205ENST00000483847 CFAP97Q9P2B7 532 aa11.64□□□□□ -0.55
SMARCC1-205ENST00000483847 CPQQ9Y646 472 aa11.64□□□□□ -0.55
SMARCC1-205ENST00000483847 IGHV1OR15-9A0A0B4J2B8 117 aa11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 ZNF840PA6NDX5 716 aa11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 GABRDO14764 452 aa11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 OLFM2O95897 454 aa11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 ADH5P11766 374 aa11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 PLCG1P19174 1290 aa11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 SCP2P22307 547 aa11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 ADSSP30520 456 aa11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 MAGEA11P43364 429 aa11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 TNFRSF4P43489 277 aa11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 PDE6CP51160 858 aa11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 PSMC1P62191 440 aaKnown RBP11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 LY6G5CQ5SRR4 150 aa11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 FAM171BQ6P995 826 aa11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 SLC36A4Q6YBV0 504 aa11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 MARCH9Q86YJ5 346 aa11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 MIB1Q86YT6 1006 aa11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 ADGRF2Q8IZF7 708 aa11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 TMEM86AQ8N2M4 240 aa11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 NAT16Q8N8M0 369 aa11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 TRIML1Q8N9V2 468 aa11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 ADAM32Q8TC27 787 aa11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 MYLPFQ96A32 169 aa11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 FUBP3Q96I24 572 aaKnown RBP eCLIP11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 LLPHQ9BRT6 129 aaKnown RBP11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 CRTAC1Q9NQ79 661 aa11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 BLOC1S4Q9NUP1 217 aa11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 TRPM5Q9NZQ8 1165 aa11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 CYP8B1Q9UNU6 501 aa11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 PCDHB9Q9Y5E1 797 aa11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 SNX9Q9Y5X1 595 aa11.63□□□□□ -0.55
SMARCC1-205ENST00000483847 A0A1W2PQD8 194 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 A0A1W2PQF6 199 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 SLC9A3R1O14745 358 aaPredicted RBP11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 TRIM24O15164 1050 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 IL18RAPO95256 599 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 ADH1CP00326 375 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 ABL1P00519 1130 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 OAS1P00973 400 aaKnown RBP11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 SYPP08247 313 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 HOXB2P14652 356 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 BDNFP23560 247 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 LMO2P25791 158 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 SLC14A1Q13336 389 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 MCM6Q14566 821 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 SOWAHAQ2M3V2 549 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 PLEKHG6Q3KR16 790 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 SLFN12LQ6IEE8 588 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 DENND5BQ6ZUT9 1274 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 TOGARAM2Q6ZUX3 1019 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 RABEPKQ7Z6M1 372 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 NT5DC4Q86YG4 428 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 ZNF513Q8N8E2 541 aaPredicted RBP11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 FAM184AQ8NB25 1140 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 KBTBD7Q8WVZ9 684 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 POMGNT1Q8WZA1 660 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 SPATA17Q96L03 361 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 ACOX2Q99424 681 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 FAM213AQ9BRX8 229 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 TTLL2Q9BWV7 592 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 SLC6A17Q9H1V8 727 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 CD248Q9HCU0 757 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 SCUBE2Q9NQ36 999 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 GDAP2Q9NXN4 497 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 SIX4Q9UIU6 781 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 LIMCH1Q9UPQ0 1083 aa11.62□□□□□ -0.55
SMARCC1-205ENST00000483847 TBC1D3BA6NDS4 549 aa11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 CBFA2T3O75081 653 aa11.61□□□□□ -0.55
SMARCC1-205ENST00000483847 TULP3O75386 442 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms