RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 TMEM105Q8N8V8 129 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 ANKRD53Q8N9V6 530 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 TET1Q8NFU7 2136 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 TOP1MTQ969P6 601 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 IL17RAQ96F46 866 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 MSLNLQ96KJ4 702 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 CTAGE1Q96RT6 745 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 FOXB1Q99853 325 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 TTPALQ9BTX7 342 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 PHF7Q9BWX1 381 aaPredicted RBP4.17□□□□□ -1.74
LRCH3-217ENST00000483442 OSBPL2Q9H1P3 480 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 SLC6A15Q9H2J7 730 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 VTA1Q9NP79 307 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 GPR108Q9NPR9 543 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 SMC4Q9NTJ3 1288 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 RNF146Q9NTX7 359 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 PARPBPQ9NWS1 579 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 SNTG2Q9NY99 539 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 NYAP2Q9P242 653 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 HDAC6Q9UBN7 1215 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 FEM1BQ9UK73 627 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 VWA7Q9Y334 891 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 USP15Q9Y4E8 981 aaPredicted RBP4.17□□□□□ -1.74
LRCH3-217ENST00000483442 ZNF532Q9HCE3 1301 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 MYO7AQ13402 2215 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 UBE2QL1A1L167 161 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 PTPDC1A2A3K4 754 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 PER2O15055 1255 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 PI15O43692 258 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 FAM20BO75063 409 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 BCAR3O75815 825 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 RB1P06400 928 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 NR4A1P22736 598 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 ICAM3P32942 547 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 NRIP1P48552 1158 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 OAZ1P54368 228 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 BPIFB4P59827 614 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 SLC6A3Q01959 620 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 IKQ13123 557 aaPredicted RBP4.16□□□□□ -1.74
LRCH3-217ENST00000483442 MTX1Q13505 466 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 BAATQ14032 418 aaPredicted RBP4.16□□□□□ -1.74
LRCH3-217ENST00000483442 PTPN21Q16825 1174 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 ST3GAL2Q16842 350 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 CC2D1AQ6P1N0 951 aaPredicted RBP4.16□□□□□ -1.74
LRCH3-217ENST00000483442 CTR9Q6PD62 1173 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 C16orf86Q6ZW13 317 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 CHST3Q7LGC8 479 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 ADGRD2Q7Z7M1 963 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 AMOTL1Q8IY63 956 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 DCLK2Q8N568 766 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 C7orf31Q8N865 590 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 OR5AN1Q8NGI8 311 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 GPR150Q8NGU9 434 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 CALML6Q8TD86 181 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 CHURC1Q8WUH1 139 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 AFG1LQ8WV93 481 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 MKL1Q969V6 931 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 EAF2Q96CJ1 260 aaPredicted RBP4.16□□□□□ -1.74
LRCH3-217ENST00000483442 SLC7A6OSQ96CW6 309 aaPredicted RBP4.16□□□□□ -1.74
LRCH3-217ENST00000483442 CLUHP3Q96NS8 147 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 DEPDC7Q96QD5 511 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 APOL5Q9BWW9 433 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 API5Q9BZZ5 524 aaKnown RBP4.16□□□□□ -1.74
LRCH3-217ENST00000483442 MFSD1Q9H3U5 465 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 ZSWIM4Q9H7M6 989 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 ATP8A2Q9NTI2 1148 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 CYP39A1Q9NYL5 469 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 SAE1Q9UBE0 346 aaPredicted RBP4.16□□□□□ -1.74
LRCH3-217ENST00000483442 SFMBT1Q9UHJ3 866 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 DBNLQ9UJU6 430 aaKnown RBP4.16□□□□□ -1.74
LRCH3-217ENST00000483442 BARX2Q9UMQ3 279 aaPredicted RBP4.16□□□□□ -1.74
LRCH3-217ENST00000483442 MYH1P12882 1939 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 RAD50Q92878 1312 aa4.16□□□□□ -1.74
LRCH3-217ENST00000483442 COL11A1P12107 1806 aaPredicted RBP4.16□□□□□ -1.74
LRCH3-217ENST00000483442 MCM3APO60318 1980 aa4.15□□□□□ -1.74
LRCH3-217ENST00000483442 TRIP12Q14669 1992 aaPredicted RBP4.15□□□□□ -1.74
LRCH3-217ENST00000483442 DCHS1Q96JQ0 3298 aa4.15□□□□□ -1.75
LRCH3-217ENST00000483442 RSPH10B2B2RC85 870 aa4.15□□□□□ -1.75
LRCH3-217ENST00000483442 MBD4O95243 580 aa4.15□□□□□ -1.75
LRCH3-217ENST00000483442 LMNAP02545 664 aaKnown RBP4.15□□□□□ -1.75
LRCH3-217ENST00000483442 GNAI2P04899 355 aa4.15□□□□□ -1.75
LRCH3-217ENST00000483442 RSPH10BP0C881 870 aa4.15□□□□□ -1.75
LRCH3-217ENST00000483442 ARP10275 920 aa4.15□□□□□ -1.75
LRCH3-217ENST00000483442 CASTP20810 708 aaKnown RBP4.15□□□□□ -1.75
LRCH3-217ENST00000483442 MCCP23508 829 aa4.15□□□□□ -1.75
LRCH3-217ENST00000483442 CALML3P27482 149 aa4.15□□□□□ -1.75
LRCH3-217ENST00000483442 THPOP40225 353 aa4.15□□□□□ -1.75
LRCH3-217ENST00000483442 ALDH5A1P51649 535 aaPredicted RBP4.15□□□□□ -1.75
LRCH3-217ENST00000483442 COASYQ13057 564 aa4.15□□□□□ -1.75
LRCH3-217ENST00000483442 CAMK1Q14012 370 aa4.15□□□□□ -1.75
LRCH3-217ENST00000483442 PPP2R5BQ15173 497 aa4.15□□□□□ -1.75
LRCH3-217ENST00000483442 TTF1Q15361 905 aaPredicted RBP4.15□□□□□ -1.75
LRCH3-217ENST00000483442 ELAVL1Q15717 326 aaKnown RBP4.15□□□□□ -1.75
LRCH3-217ENST00000483442 LY6KQ17RY6 165 aa4.15□□□□□ -1.75
LRCH3-217ENST00000483442 TRIM71Q2Q1W2 868 aaKnown RBP4.15□□□□□ -1.75
LRCH3-217ENST00000483442 TKFCQ3LXA3 575 aa4.15□□□□□ -1.75
LRCH3-217ENST00000483442 ALDH1L2Q3SY69 923 aa4.15□□□□□ -1.75
LRCH3-217ENST00000483442 FAM111BQ6SJ93 734 aa4.15□□□□□ -1.75
LRCH3-217ENST00000483442 MRGPREQ86SM8 312 aa4.15□□□□□ -1.75
LRCH3-217ENST00000483442 DHX37Q8IY37 1157 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms