RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 SNX25Q9H3E2 840 aa14.84□□□□□ -0.03
VARS-226ENST00000483275 TRPM5Q9NZQ8 1165 aa14.84□□□□□ -0.03
VARS-226ENST00000483275 EBF1Q9UH73 591 aa14.84□□□□□ -0.03
VARS-226ENST00000483275 GTF3C3Q9Y5Q9 886 aa14.84□□□□□ -0.03
VARS-226ENST00000483275 CACNA1EQ15878 2313 aa14.84□□□□□ -0.03
VARS-226ENST00000483275 PLXND1Q9Y4D7 1925 aa14.84□□□□□ -0.03
VARS-226ENST00000483275 WDFY3Q8IZQ1 3526 aa14.83□□□□□ -0.03
VARS-226ENST00000483275 RHOBTB1O94844 696 aa14.83□□□□□ -0.04
VARS-226ENST00000483275 CST3P01034 146 aaPredicted RBP14.83□□□□□ -0.04
VARS-226ENST00000483275 NOVA1P51513 510 aaKnown RBP14.83□□□□□ -0.04
VARS-226ENST00000483275 TAF10Q12962 218 aa14.83□□□□□ -0.04
VARS-226ENST00000483275 NR1H3Q13133 447 aa14.83□□□□□ -0.04
VARS-226ENST00000483275 E2F4Q16254 413 aa14.83□□□□□ -0.04
VARS-226ENST00000483275 SNRNP35Q16560 246 aaKnown RBP14.83□□□□□ -0.04
VARS-226ENST00000483275 FOXD4L5Q5VV16 416 aaPredicted RBP14.83□□□□□ -0.04
VARS-226ENST00000483275 PMS2CLQ68D20 193 aa14.83□□□□□ -0.04
VARS-226ENST00000483275 VSTM1Q6UX27 236 aa14.83□□□□□ -0.04
VARS-226ENST00000483275 TMEM92Q6UXU6 159 aa14.83□□□□□ -0.04
VARS-226ENST00000483275 SCARA5Q6ZMJ2 495 aa14.83□□□□□ -0.04
VARS-226ENST00000483275 WDR49Q8IV35 697 aa14.83□□□□□ -0.04
VARS-226ENST00000483275 OR6B3Q8NGW1 331 aa14.83□□□□□ -0.04
VARS-226ENST00000483275 MYCBPAPQ8TBZ2 947 aa14.83□□□□□ -0.04
VARS-226ENST00000483275 SPATA18Q8TC71 538 aa14.83□□□□□ -0.04
VARS-226ENST00000483275 FOXD4L4Q8WXT5 416 aaPredicted RBP14.83□□□□□ -0.04
VARS-226ENST00000483275 ERLEC1Q96DZ1 483 aa14.83□□□□□ -0.04
VARS-226ENST00000483275 TTLL2Q9BWV7 592 aa14.83□□□□□ -0.04
VARS-226ENST00000483275 LSM14BQ9BX40 385 aaKnown RBP14.83□□□□□ -0.04
VARS-226ENST00000483275 GZF1Q9H116 711 aaPredicted RBP14.83□□□□□ -0.04
VARS-226ENST00000483275 SMYD3Q9H7B4 428 aa14.83□□□□□ -0.04
VARS-226ENST00000483275 AGPAT3Q9NRZ7 376 aa14.83□□□□□ -0.04
VARS-226ENST00000483275 NXF1Q9UBU9 619 aaKnown RBP14.83□□□□□ -0.04
VARS-226ENST00000483275 ATXN2Q99700 1313 aaKnown RBP14.83□□□□□ -0.04
VARS-226ENST00000483275 SGK1O00141 431 aa14.82□□□□□ -0.04
VARS-226ENST00000483275 TGFB1I1O43294 461 aa14.82□□□□□ -0.04
VARS-226ENST00000483275 CLSTN1O94985 981 aa14.82□□□□□ -0.04
VARS-226ENST00000483275 KLF8O95600 359 aaPredicted RBP14.82□□□□□ -0.04
VARS-226ENST00000483275 TOP3BO95985 862 aaKnown RBP14.82□□□□□ -0.04
VARS-226ENST00000483275 OAS1P00973 400 aaKnown RBP14.82□□□□□ -0.04
VARS-226ENST00000483275 MBL2P11226 248 aaPredicted RBP14.82□□□□□ -0.04
VARS-226ENST00000483275 CHRM1P11229 460 aaPredicted RBP14.82□□□□□ -0.04
VARS-226ENST00000483275 TNNI1P19237 187 aa14.82□□□□□ -0.04
VARS-226ENST00000483275 TIE1P35590 1138 aa14.82□□□□□ -0.04
VARS-226ENST00000483275 GNL1P36915 607 aaPredicted RBP14.82□□□□□ -0.04
VARS-226ENST00000483275 DHPSP49366 369 aaPredicted RBP14.82□□□□□ -0.04
VARS-226ENST00000483275 CASP4P49662 377 aa14.82□□□□□ -0.04
VARS-226ENST00000483275 MYL6P60660 151 aa14.82□□□□□ -0.04
VARS-226ENST00000483275 CYP24A1Q07973 514 aa14.82□□□□□ -0.04
VARS-226ENST00000483275 STK38Q15208 465 aa14.82□□□□□ -0.04
VARS-226ENST00000483275 DHCR24Q15392 516 aa14.82□□□□□ -0.04
VARS-226ENST00000483275 EMC10Q5UCC4 262 aa14.82□□□□□ -0.04
VARS-226ENST00000483275 CYP2U1Q7Z449 544 aa14.82□□□□□ -0.04
VARS-226ENST00000483275 TXNDC5Q8NBS9 432 aaKnown RBP14.82□□□□□ -0.04
VARS-226ENST00000483275 EXOC4Q96A65 974 aa14.82□□□□□ -0.04
VARS-226ENST00000483275 CGRRF1Q99675 332 aa14.82□□□□□ -0.04
VARS-226ENST00000483275 B3GNT5Q9BYG0 378 aa14.82□□□□□ -0.04
VARS-226ENST00000483275 TRIM9Q9C026 710 aa14.82□□□□□ -0.04
VARS-226ENST00000483275 TFIP11Q9UBB9 837 aaKnown RBP14.82□□□□□ -0.04
VARS-226ENST00000483275 MMP17Q9ULZ9 603 aa14.82□□□□□ -0.04
VARS-226ENST00000483275 FAM208BQ5VWN6 2430 aa14.81□□□□□ -0.04
VARS-226ENST00000483275 TRIM66O15016 1216 aa14.81□□□□□ -0.04
VARS-226ENST00000483275 TCF3P15923 654 aa14.81□□□□□ -0.04
VARS-226ENST00000483275 PTPN1P18031 435 aaKnown RBP14.81□□□□□ -0.04
VARS-226ENST00000483275 NASPP49321 788 aaPredicted RBP14.81□□□□□ -0.04
VARS-226ENST00000483275 TNNC1P63316 161 aa14.81□□□□□ -0.04
VARS-226ENST00000483275 SLC7A9P82251 487 aa14.81□□□□□ -0.04
VARS-226ENST00000483275 ZNF252P-AS1Q0IIN9 211 aa14.81□□□□□ -0.04
VARS-226ENST00000483275 FOXC1Q12948 553 aa14.81□□□□□ -0.04
VARS-226ENST00000483275 ORC1Q13415 861 aa14.81□□□□□ -0.04
VARS-226ENST00000483275 MAPRE1Q15691 268 aaKnown RBP14.81□□□□□ -0.04
VARS-226ENST00000483275 WDR72Q3MJ13 1102 aa14.81□□□□□ -0.04
VARS-226ENST00000483275 FOXD4L6Q3SYB3 417 aaPredicted RBP14.81□□□□□ -0.04
VARS-226ENST00000483275 USP39Q53GS9 565 aaKnown RBP14.81□□□□□ -0.04
VARS-226ENST00000483275 FAM26FQ5R3K3 315 aa14.81□□□□□ -0.04
VARS-226ENST00000483275 SH3PXD2AQ5TCZ1 1133 aa14.81□□□□□ -0.04
VARS-226ENST00000483275 FOXD4L3Q6VB84 417 aaPredicted RBP14.81□□□□□ -0.04
VARS-226ENST00000483275 EPM2AIP1Q7L775 607 aaPredicted RBP14.81□□□□□ -0.04
VARS-226ENST00000483275 DPH6Q7L8W6 267 aa14.81□□□□□ -0.04
VARS-226ENST00000483275 RASSF3Q86WH2 238 aa14.81□□□□□ -0.04
VARS-226ENST00000483275 HMGB4Q8WW32 186 aa14.81□□□□□ -0.04
VARS-226ENST00000483275 ZNF516Q92618 1163 aa14.81□□□□□ -0.04
VARS-226ENST00000483275 WBP2Q969T9 261 aa14.81□□□□□ -0.04
VARS-226ENST00000483275 CNOT6LQ96LI5 555 aaKnown RBP14.81□□□□□ -0.04
VARS-226ENST00000483275 BLZF1Q9H2G9 400 aa14.81□□□□□ -0.04
VARS-226ENST00000483275 TNMDQ9H2S6 317 aa14.81□□□□□ -0.04
VARS-226ENST00000483275 FSCN3Q9NQT6 498 aa14.81□□□□□ -0.04
VARS-226ENST00000483275 KBTBD4Q9NVX7 518 aa14.81□□□□□ -0.04
VARS-226ENST00000483275 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.8□□□□□ -0.04
VARS-226ENST00000483275 KIAA0391O15091 583 aaKnown RBP14.8□□□□□ -0.04
VARS-226ENST00000483275 EIF3DO15371 548 aaKnown RBP eCLIP14.8□□□□□ -0.04
VARS-226ENST00000483275 OLFM2O95897 454 aa14.8□□□□□ -0.04
VARS-226ENST00000483275 IRF1P10914 325 aa14.8□□□□□ -0.04
VARS-226ENST00000483275 ADH5P11766 374 aa14.8□□□□□ -0.04
VARS-226ENST00000483275 PTGER3P43115 390 aa14.8□□□□□ -0.04
VARS-226ENST00000483275 PDE6CP51160 858 aa14.8□□□□□ -0.04
VARS-226ENST00000483275 CDH8P55286 799 aa14.8□□□□□ -0.04
VARS-226ENST00000483275 NOP14P78316 857 aaKnown RBP14.8□□□□□ -0.04
VARS-226ENST00000483275 PSMD6Q15008 389 aa14.8□□□□□ -0.04
VARS-226ENST00000483275 CRY1Q16526 586 aa14.8□□□□□ -0.04
VARS-226ENST00000483275 UAP1L1Q3KQV9 507 aa14.8□□□□□ -0.04
VARS-226ENST00000483275 LY6G5CQ5SRR4 150 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms