RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 OR1D2P34982 312 aa10.69□□□□□ -0.7
USP39-215ENST00000481409 GRIK1P39086 918 aa10.69□□□□□ -0.7
USP39-215ENST00000481409 PSEN1P49768 467 aa10.69□□□□□ -0.7
USP39-215ENST00000481409 MAP3K7CLP57077 242 aa10.69□□□□□ -0.7
USP39-215ENST00000481409 GNG11P61952 73 aa10.69□□□□□ -0.7
USP39-215ENST00000481409 SMAD3P84022 425 aaKnown RBP10.69□□□□□ -0.7
USP39-215ENST00000481409 ROR1Q01973 937 aa10.69□□□□□ -0.7
USP39-215ENST00000481409 PLD1Q13393 1074 aa10.69□□□□□ -0.7
USP39-215ENST00000481409 ZNF569Q5MCW4 686 aa10.69□□□□□ -0.7
USP39-215ENST00000481409 PM20D1Q6GTS8 502 aa10.69□□□□□ -0.7
USP39-215ENST00000481409 DCUN1D2Q6PH85 259 aa10.69□□□□□ -0.7
USP39-215ENST00000481409 ELMSAN1Q6PJG2 1045 aa10.69□□□□□ -0.7
USP39-215ENST00000481409 OLFML1Q6UWY5 402 aa10.69□□□□□ -0.7
USP39-215ENST00000481409 TMC7Q7Z402 723 aa10.69□□□□□ -0.7
USP39-215ENST00000481409 ARHGAP18Q8N392 663 aa10.69□□□□□ -0.7
USP39-215ENST00000481409 NIPA2Q8N8Q9 360 aa10.69□□□□□ -0.7
USP39-215ENST00000481409 ZMIZ2Q8NF64 920 aa10.69□□□□□ -0.7
USP39-215ENST00000481409 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.69□□□□□ -0.7
USP39-215ENST00000481409 SPPL3Q8TCT6 385 aa10.69□□□□□ -0.7
USP39-215ENST00000481409 HDAC7Q8WUI4 952 aa10.69□□□□□ -0.7
USP39-215ENST00000481409 OVCA2Q8WZ82 227 aa10.69□□□□□ -0.7
USP39-215ENST00000481409 GOLGA1Q92805 767 aa10.69□□□□□ -0.7
USP39-215ENST00000481409 ARHGEF26Q96DR7 871 aa10.69□□□□□ -0.7
USP39-215ENST00000481409 TMEM209Q96SK2 561 aa10.69□□□□□ -0.7
USP39-215ENST00000481409 TMLHEQ9NVH6 421 aa10.69□□□□□ -0.7
USP39-215ENST00000481409 ABI2Q9NYB9 513 aaPredicted RBP10.69□□□□□ -0.7
USP39-215ENST00000481409 PAXBP1Q9Y5B6 917 aa10.69□□□□□ -0.7
USP39-215ENST00000481409 USP3Q9Y6I4 520 aa10.69□□□□□ -0.7
USP39-215ENST00000481409 DUSP10Q9Y6W6 482 aa10.69□□□□□ -0.7
USP39-215ENST00000481409 MKI67P46013 3256 aaKnown RBP10.68□□□□□ -0.7
USP39-215ENST00000481409 WDR27A2RRH5 827 aa10.68□□□□□ -0.7
USP39-215ENST00000481409 LCHNA4D1U4 455 aa10.68□□□□□ -0.7
USP39-215ENST00000481409 CTAGE9A4FU28 777 aa10.68□□□□□ -0.7
USP39-215ENST00000481409 FSCN2O14926 492 aa10.68□□□□□ -0.7
USP39-215ENST00000481409 CXCL14O95715 111 aa10.68□□□□□ -0.7
USP39-215ENST00000481409 ZBED1O96006 694 aa10.68□□□□□ -0.7
USP39-215ENST00000481409 CA3P07451 260 aa10.68□□□□□ -0.7
USP39-215ENST00000481409 TNNT1P13805 278 aa10.68□□□□□ -0.7
USP39-215ENST00000481409 CASQ1P31415 396 aa10.68□□□□□ -0.7
USP39-215ENST00000481409 PPP3CCP48454 512 aa10.68□□□□□ -0.7
USP39-215ENST00000481409 TKTL1P51854 596 aa10.68□□□□□ -0.7
USP39-215ENST00000481409 MRPS5P82675 430 aaKnown RBP10.68□□□□□ -0.7
USP39-215ENST00000481409 CLUL1Q15846 466 aa10.68□□□□□ -0.7
USP39-215ENST00000481409 FAM102AQ5T9C2 384 aaPredicted RBP10.68□□□□□ -0.7
USP39-215ENST00000481409 OR6B2Q6IFH4 312 aa10.68□□□□□ -0.7
USP39-215ENST00000481409 PRSS55Q6UWB4 352 aaPredicted RBP10.68□□□□□ -0.7
USP39-215ENST00000481409 RNF19BQ6ZMZ0 732 aa10.68□□□□□ -0.7
USP39-215ENST00000481409 CCDC149Q6ZUS6 474 aa10.68□□□□□ -0.7
USP39-215ENST00000481409 DAAM2Q86T65 1068 aa10.68□□□□□ -0.7
USP39-215ENST00000481409 TCEAL8Q8IYN2 117 aa10.68□□□□□ -0.7
USP39-215ENST00000481409 NUP93Q8N1F7 819 aa10.68□□□□□ -0.7
USP39-215ENST00000481409 MRPL43Q8N983 215 aaKnown RBP10.68□□□□□ -0.7
USP39-215ENST00000481409 LRRC57Q8N9N7 239 aa10.68□□□□□ -0.7
USP39-215ENST00000481409 POF1BQ8WVV4 589 aa10.68□□□□□ -0.7
USP39-215ENST00000481409 C16orf45Q96MC5 204 aaPredicted RBP10.68□□□□□ -0.7
USP39-215ENST00000481409 OSGEPQ9NPF4 335 aa10.68□□□□□ -0.7
USP39-215ENST00000481409 IL37Q9NZH6 218 aa10.68□□□□□ -0.7
USP39-215ENST00000481409 ANAPC7Q9UJX3 599 aa10.68□□□□□ -0.7
USP39-215ENST00000481409 TMEM59LQ9UK28 342 aa10.68□□□□□ -0.7
USP39-215ENST00000481409 AMFRQ9UKV5 643 aa10.68□□□□□ -0.7
USP39-215ENST00000481409 ASB3Q9Y575 518 aa10.68□□□□□ -0.7
USP39-215ENST00000481409 PLXNA4Q9HCM2 1894 aa10.68□□□□□ -0.7
USP39-215ENST00000481409 TMEM265A0A087WTH1 108 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 FAM92AA1XBS5 289 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 CCDC66A2RUB6 948 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 F8VP50 259 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 TULP2O00295 520 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 CES2O00748 559 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 DPYSL4O14531 572 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 TNFRSF10BO14763 440 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 PAPSS1O43252 624 aaPredicted RBP10.67□□□□□ -0.7
USP39-215ENST00000481409 BUB1O43683 1085 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 PALMO75781 387 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 BEST1O76090 585 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 MOCS3O95396 460 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 OR4Q2P0C623 313 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 CSH1P0DML2 217 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 CSH2P0DML3 217 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 CYP2F1P24903 491 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 SSTR3P32745 418 aaPredicted RBP10.67□□□□□ -0.7
USP39-215ENST00000481409 PCK1P35558 622 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 PTPN9P43378 593 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 ALDH1A3P47895 512 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 RGS7P49802 495 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 ZNF143P52747 638 aaPredicted RBP10.67□□□□□ -0.7
USP39-215ENST00000481409 RABGGTBP53611 331 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 SLC5A3P53794 718 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 DAOAP59103 153 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 YWHAZP63104 245 aaKnown RBP10.67□□□□□ -0.7
USP39-215ENST00000481409 ADCY1Q08828 1119 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 ADIGQ0VDE8 80 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 VEPH1Q14D04 833 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 MGAT5BQ3V5L5 792 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 LRRC38Q5VT99 294 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 RSPO2Q6UXX9 243 aaPredicted RBP10.67□□□□□ -0.7
USP39-215ENST00000481409 DENND5BQ6ZUT9 1274 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 FAM183BPQ6ZVS7 135 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 ITIH5Q86UX2 942 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 MON1AQ86VX9 555 aa10.67□□□□□ -0.7
USP39-215ENST00000481409 C17orf53Q8N3J3 647 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms