RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 RMDN1Q96DB5 314 aa12.91□□□□□ -0.34
SQSTM1-207ENST00000481335 CHFRQ96EP1 664 aa12.91□□□□□ -0.34
SQSTM1-207ENST00000481335 SLC22A12Q96S37 553 aa12.91□□□□□ -0.34
SQSTM1-207ENST00000481335 DUSP9Q99956 384 aaKnown RBP12.91□□□□□ -0.34
SQSTM1-207ENST00000481335 NXF1Q9UBU9 619 aaKnown RBP12.91□□□□□ -0.34
SQSTM1-207ENST00000481335 NME7Q9Y5B8 376 aa12.91□□□□□ -0.34
SQSTM1-207ENST00000481335 OAS1P00973 400 aaKnown RBP12.9□□□□□ -0.34
SQSTM1-207ENST00000481335 ARSAP15289 507 aa12.9□□□□□ -0.34
SQSTM1-207ENST00000481335 FNTBP49356 437 aa12.9□□□□□ -0.34
SQSTM1-207ENST00000481335 USP46P62068 366 aa12.9□□□□□ -0.34
SQSTM1-207ENST00000481335 SNX30Q5VWJ9 437 aa12.9□□□□□ -0.34
SQSTM1-207ENST00000481335 INTS8Q75QN2 995 aaKnown RBP12.9□□□□□ -0.34
SQSTM1-207ENST00000481335 PLEKHO2Q8TD55 490 aa12.9□□□□□ -0.34
SQSTM1-207ENST00000481335 CD101Q93033 1021 aa12.9□□□□□ -0.34
SQSTM1-207ENST00000481335 SMARCD1Q96GM5 515 aa12.9□□□□□ -0.34
SQSTM1-207ENST00000481335 FAXDC2Q96IV6 333 aa12.9□□□□□ -0.34
SQSTM1-207ENST00000481335 LOXL4Q96JB6 756 aa12.9□□□□□ -0.34
SQSTM1-207ENST00000481335 CYP2S1Q96SQ9 504 aa12.9□□□□□ -0.34
SQSTM1-207ENST00000481335 IMPG2Q9BZV3 1241 aa12.9□□□□□ -0.34
SQSTM1-207ENST00000481335 DMAP1Q9NPF5 467 aaPredicted RBP12.9□□□□□ -0.34
SQSTM1-207ENST00000481335 SLC8A2Q9UPR5 921 aa12.9□□□□□ -0.34
SQSTM1-207ENST00000481335 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.89□□□□□ -0.35
SQSTM1-207ENST00000481335 FAM92AA1XBS5 289 aa12.89□□□□□ -0.35
SQSTM1-207ENST00000481335 LEFTY2O00292 366 aa12.89□□□□□ -0.35
SQSTM1-207ENST00000481335 ASS1P00966 412 aaKnown RBP12.89□□□□□ -0.35
SQSTM1-207ENST00000481335 TGM1P22735 817 aa12.89□□□□□ -0.35
SQSTM1-207ENST00000481335 RPL13P26373 211 aaKnown RBP12.89□□□□□ -0.35
SQSTM1-207ENST00000481335 YWHAQP27348 245 aa12.89□□□□□ -0.35
SQSTM1-207ENST00000481335 EIF2DP41214 584 aaKnown RBP12.89□□□□□ -0.35
SQSTM1-207ENST00000481335 CASP4P49662 377 aa12.89□□□□□ -0.35
SQSTM1-207ENST00000481335 TAF10Q12962 218 aa12.89□□□□□ -0.35
SQSTM1-207ENST00000481335 PRR23BQ6ZRT6 265 aa12.89□□□□□ -0.35
SQSTM1-207ENST00000481335 SYT13Q7L8C5 426 aa12.89□□□□□ -0.35
SQSTM1-207ENST00000481335 DGLUCYQ7Z3D6 616 aa12.89□□□□□ -0.35
SQSTM1-207ENST00000481335 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.89□□□□□ -0.35
SQSTM1-207ENST00000481335 FAM35AQ86V20 835 aa12.89□□□□□ -0.35
SQSTM1-207ENST00000481335 GUF1Q8N442 669 aaKnown RBP12.89□□□□□ -0.35
SQSTM1-207ENST00000481335 OTUB2Q96DC9 234 aa12.89□□□□□ -0.35
SQSTM1-207ENST00000481335 B3GNT5Q9BYG0 378 aa12.89□□□□□ -0.35
SQSTM1-207ENST00000481335 ZNF518BQ9C0D4 1074 aa12.89□□□□□ -0.35
SQSTM1-207ENST00000481335 DNAI2Q9GZS0 605 aa12.89□□□□□ -0.35
SQSTM1-207ENST00000481335 DPEP3Q9H4B8 488 aa12.89□□□□□ -0.35
SQSTM1-207ENST00000481335 FAM124BQ9H5Z6 455 aaPredicted RBP12.89□□□□□ -0.35
SQSTM1-207ENST00000481335 SMYD3Q9H7B4 428 aa12.89□□□□□ -0.35
SQSTM1-207ENST00000481335 IL37Q9NZH6 218 aa12.89□□□□□ -0.35
SQSTM1-207ENST00000481335 WNT6Q9Y6F9 365 aa12.89□□□□□ -0.35
SQSTM1-207ENST00000481335 RNF40O75150 1001 aa12.88□□□□□ -0.35
SQSTM1-207ENST00000481335 CLSTN1O94985 981 aa12.88□□□□□ -0.35
SQSTM1-207ENST00000481335 VNN1O95497 513 aa12.88□□□□□ -0.35
SQSTM1-207ENST00000481335 EGFP01133 1207 aa12.88□□□□□ -0.35
SQSTM1-207ENST00000481335 GALK1P51570 392 aa12.88□□□□□ -0.35
SQSTM1-207ENST00000481335 NDUFA8P51970 172 aa12.88□□□□□ -0.35
SQSTM1-207ENST00000481335 MCCD1P59942 119 aaPredicted RBP12.88□□□□□ -0.35
SQSTM1-207ENST00000481335 DPYDQ12882 1025 aa12.88□□□□□ -0.35
SQSTM1-207ENST00000481335 CEP135Q66GS9 1140 aa12.88□□□□□ -0.35
SQSTM1-207ENST00000481335 KRBA2Q6ZNG9 492 aa12.88□□□□□ -0.35
SQSTM1-207ENST00000481335 SV2AQ7L0J3 742 aa12.88□□□□□ -0.35
SQSTM1-207ENST00000481335 CRYBG2Q8N1P7 616 aa12.88□□□□□ -0.35
SQSTM1-207ENST00000481335 SPRYD3Q8NCJ5 442 aa12.88□□□□□ -0.35
SQSTM1-207ENST00000481335 GAB3Q8WWW8 586 aa12.88□□□□□ -0.35
SQSTM1-207ENST00000481335 FBXO44Q9H4M3 255 aa12.88□□□□□ -0.35
SQSTM1-207ENST00000481335 PNPLA8Q9NP80 782 aa12.88□□□□□ -0.35
SQSTM1-207ENST00000481335 TBC1D14Q9P2M4 693 aa12.88□□□□□ -0.35
SQSTM1-207ENST00000481335 USP18Q9UMW8 372 aa12.88□□□□□ -0.35
SQSTM1-207ENST00000481335 ZDHHC9Q9Y397 364 aa12.88□□□□□ -0.35
SQSTM1-207ENST00000481335 MYOFQ9NZM1 2061 aa12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 E2F8A0AVK6 867 aa12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 TNFRSF10BO14763 440 aa12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 HRO43593 1189 aa12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 KRT13P13646 458 aa12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 NR2F2P24468 414 aa12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 GTF2H1P32780 548 aa12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 PIK3CAP42336 1068 aa12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 VAMP7P51809 220 aa12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 SLC5A3P53794 718 aa12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 CACNA2D1P54289 1103 aa12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 DMWDQ09019 674 aa12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 INCA1Q0VD86 236 aa12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 CSRP2Q16527 193 aa12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 RSPO4Q2I0M5 234 aaPredicted RBP12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 EDRF1Q3B7T1 1238 aa12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 HSF5Q4G112 596 aaPredicted RBP12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 PREPLQ4J6C6 727 aaPredicted RBP12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 CEP68Q76N32 757 aa12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 TTC39CQ8N584 583 aa12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 NETO1Q8TDF5 533 aa12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 FBXO32Q969P5 355 aa12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 RTKNQ9BST9 563 aa12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 MED10Q9BTT4 135 aa12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 CYP3A43Q9HB55 503 aa12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 CSNK1G1Q9HCP0 422 aa12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 TMEM30AQ9NV96 361 aa12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 EBF1Q9UH73 591 aa12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 CDV3Q9UKY7 258 aaKnown RBP12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 CPQQ9Y646 472 aa12.87□□□□□ -0.35
SQSTM1-207ENST00000481335 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.86□□□□□ -0.35
SQSTM1-207ENST00000481335 CLDN5O00501 218 aa12.86□□□□□ -0.35
SQSTM1-207ENST00000481335 RPP40O75818 363 aaKnown RBP12.86□□□□□ -0.35
SQSTM1-207ENST00000481335 AP1G2O75843 785 aa12.86□□□□□ -0.35
SQSTM1-207ENST00000481335 ADH1CP00326 375 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms