RNA–Protein interactions for RNA: ENST00000481152.2

CHCHD3-205, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 2

Gene CHCHD3, Length 1,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-205ENST00000481152 ATP8B1O43520 1251 aa5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 MFAP3LO75121 409 aa5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 BAIAP3O94812 1187 aa5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 LARGE1O95461 756 aa5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 HNRNPCP07910 306 aaKnown RBP eCLIP5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 CLEC2LP0C7M8 214 aa5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 TNNT1P13805 278 aa5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 XPAP23025 273 aaPredicted RBP5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 HOXC9P31274 260 aa5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 HOXC13P31276 330 aa5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 NRG3P56975 720 aa5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 BTKQ06187 659 aa5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 RESTQ13127 1097 aa5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 FHL2Q14192 279 aa5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 STX1AQ16623 288 aa5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 ANO6Q4KMQ2 910 aa5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 LMBRD2Q68DH5 695 aaPredicted RBP5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 CCDC62Q6P9F0 684 aa5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 PGM2L1Q6PCE3 622 aa5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 LMBR1LQ6UX01 489 aa5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 CWC27Q6UX04 472 aaKnown RBP5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 LYSMD2Q8IV50 215 aa5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 LRRC8AQ8IWT6 810 aa5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 LMNTD2Q8IXW0 634 aa5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 KRT222Q8N1A0 295 aa5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 KIF18AQ8NI77 898 aa5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 ZNF483Q8TF39 744 aaPredicted RBP5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 GTF3C6Q969F1 213 aa5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 AHCYL2Q96HN2 611 aaKnown RBP5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 TBCBQ99426 244 aa5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 AGXT2Q9BYV1 514 aa5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 TRIM5Q9C035 493 aa5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 NAT10Q9H0A0 1025 aaKnown RBP5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 ENKD1Q9H0I2 346 aa5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 DACT1Q9NYF0 836 aa5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 DBF4Q9UBU7 674 aaPredicted RBP5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 SCN11AQ9UI33 1791 aa5.58□□□□□ -1.52
CHCHD3-205ENST00000481152 A0A1W2PR48 441 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 VPS37CA5D8V6 355 aaPredicted RBP5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 RASA4BC9J798 803 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 GOLGA6L19H0YKK7 550 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 EYA2O00167 538 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 CLGNO14967 610 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 RASA4O43374 803 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 KRT20P35900 424 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 IL6STP40189 918 aaPredicted RBP5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 UBA7P41226 1012 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 AMPHP49418 695 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 CBX1P83916 185 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 MGAT5Q09328 741 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 TOB2Q14106 344 aaPredicted RBP5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 TRIM25Q14258 630 aaKnown RBP5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 ZNF267Q14586 743 aaPredicted RBP5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 FAM214AQ32MH5 1076 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 ADCK5Q3MIX3 580 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 PRR16Q569H4 304 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 RRP12Q5JTH9 1297 aaKnown RBP5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 C1QL3Q5VWW1 255 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 SPATA1Q5VX52 437 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 KIAA1614Q5VZ46 1190 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 SWSAP1Q6NVH7 229 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 CYP26C1Q6V0L0 522 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 C4orf50Q6ZRC1 276 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 HTR3DQ70Z44 454 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 FASTKD5Q7L8L6 764 aaKnown RBP5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 TAS1R1Q7RTX1 841 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 GLB1L2Q8IW92 636 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 CCDC150Q8NCX0 1101 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 FAM156AQ8NDB6 213 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 MDGA1Q8NFP4 955 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 LINS1Q8NG48 757 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 RSAD2Q8WXG1 361 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 ST8SIA2Q92186 375 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 CCDC47Q96A33 483 aaKnown RBP5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 SLC26A6Q9BXS9 759 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 UNC45AQ9H3U1 944 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 MMRN2Q9H8L6 949 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 ARFGAP3Q9NP61 516 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 ANO10Q9NW15 660 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 MIS18AQ9NYP9 233 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 CLIP2Q9UDT6 1046 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 PRSS50Q9UI38 385 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 CRYL1Q9Y2S2 319 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 NOC2LQ9Y3T9 749 aaKnown RBP5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 PCDHGB6Q9Y5F9 930 aa5.57□□□□□ -1.52
CHCHD3-205ENST00000481152 RRN3P2A6NIE6 340 aa5.56□□□□□ -1.52
CHCHD3-205ENST00000481152 PCDHGA12O60330 932 aa5.56□□□□□ -1.52
CHCHD3-205ENST00000481152 PLOD3O60568 738 aa5.56□□□□□ -1.52
CHCHD3-205ENST00000481152 PFKFB2O60825 505 aa5.56□□□□□ -1.52
CHCHD3-205ENST00000481152 INMTO95050 263 aa5.56□□□□□ -1.52
CHCHD3-205ENST00000481152 SLU7O95391 586 aaKnown RBP5.56□□□□□ -1.52
CHCHD3-205ENST00000481152 PEX11BO96011 259 aa5.56□□□□□ -1.52
CHCHD3-205ENST00000481152 CFBP00751 764 aa5.56□□□□□ -1.52
CHCHD3-205ENST00000481152 TPM1P09493 284 aa5.56□□□□□ -1.52
CHCHD3-205ENST00000481152 H2AFXP16104 143 aaPredicted RBP5.56□□□□□ -1.52
CHCHD3-205ENST00000481152 GNAT2P19087 354 aa5.56□□□□□ -1.52
CHCHD3-205ENST00000481152 U2AF2P26368 475 aaKnown RBP eCLIP5.56□□□□□ -1.527e-7■■■□□ 15.8
CHCHD3-205ENST00000481152 CASRP41180 1078 aa5.56□□□□□ -1.52
CHCHD3-205ENST00000481152 PIK3CAP42336 1068 aa5.56□□□□□ -1.52
CHCHD3-205ENST00000481152 EVCP57679 992 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms