RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 CYFIP2Q96F07 1278 aa7.78□□□□□ -1.16
CBX3-206ENST00000481057 LSM14BQ9BX40 385 aaKnown RBP7.78□□□□□ -1.16
CBX3-206ENST00000481057 DEF6Q9H4E7 631 aa7.78□□□□□ -1.16
CBX3-206ENST00000481057 HECAQ9UBI9 543 aaPredicted RBP7.78□□□□□ -1.16
CBX3-206ENST00000481057 AJAP1Q9UKB5 411 aaPredicted RBP7.78□□□□□ -1.16
CBX3-206ENST00000481057 DOPEY1Q5JWR5 2465 aa7.78□□□□□ -1.16
CBX3-206ENST00000481057 OTOGLQ3ZCN5 2332 aa7.78□□□□□ -1.16
CBX3-206ENST00000481057 UTYO14607 1347 aa7.78□□□□□ -1.16
CBX3-206ENST00000481057 HECTD1Q9ULT8 2610 aa7.77□□□□□ -1.17
CBX3-206ENST00000481057 KRTAP9-7A8MTY7 169 aa7.77□□□□□ -1.17
CBX3-206ENST00000481057 GPR32O75388 356 aa7.77□□□□□ -1.17
CBX3-206ENST00000481057 IPO13O94829 963 aaKnown RBP7.77□□□□□ -1.17
CBX3-206ENST00000481057 AMY1AP04745 511 aa7.77□□□□□ -1.17
CBX3-206ENST00000481057 AKAP5P24588 427 aa7.77□□□□□ -1.17
CBX3-206ENST00000481057 RGS2P41220 211 aa7.77□□□□□ -1.17
CBX3-206ENST00000481057 PPP2R5AQ15172 486 aa7.77□□□□□ -1.17
CBX3-206ENST00000481057 FAM47AQ5JRC9 791 aa7.77□□□□□ -1.17
CBX3-206ENST00000481057 MFSD14CQ5VZR4 134 aa7.77□□□□□ -1.17
CBX3-206ENST00000481057 ANO1Q5XXA6 986 aa7.77□□□□□ -1.17
CBX3-206ENST00000481057 ANKRD33Q7Z3H0 272 aa7.77□□□□□ -1.17
CBX3-206ENST00000481057 SGMS1Q86VZ5 419 aa7.77□□□□□ -1.17
CBX3-206ENST00000481057 ZGPATQ8N5A5 531 aaKnown RBP7.77□□□□□ -1.17
CBX3-206ENST00000481057 MDGA1Q8NFP4 955 aa7.77□□□□□ -1.17
CBX3-206ENST00000481057 CCHCR1Q8TD31 782 aa7.77□□□□□ -1.17
CBX3-206ENST00000481057 ST8SIA2Q92186 375 aa7.77□□□□□ -1.17
CBX3-206ENST00000481057 USP6NLQ92738 828 aa7.77□□□□□ -1.17
CBX3-206ENST00000481057 KAT5Q92993 513 aa7.77□□□□□ -1.17
CBX3-206ENST00000481057 ADOQ96SZ5 270 aa7.77□□□□□ -1.17
CBX3-206ENST00000481057 KLC2Q9H0B6 622 aa7.77□□□□□ -1.17
CBX3-206ENST00000481057 TMEM140Q9NV12 185 aa7.77□□□□□ -1.17
CBX3-206ENST00000481057 TBX21Q9UL17 535 aa7.77□□□□□ -1.17
CBX3-206ENST00000481057 PCDHA13Q9Y5I0 950 aa7.77□□□□□ -1.17
CBX3-206ENST00000481057 ARAP2Q8WZ64 1704 aa7.77□□□□□ -1.17
CBX3-206ENST00000481057 CNOT1A5YKK6 2376 aaKnown RBP7.76□□□□□ -1.17
CBX3-206ENST00000481057 CEP295Q9C0D2 2601 aa7.76□□□□□ -1.17
CBX3-206ENST00000481057 B5MCH6 92 aa7.76□□□□□ -1.17
CBX3-206ENST00000481057 SGTAO43765 313 aa7.76□□□□□ -1.17
CBX3-206ENST00000481057 MFAP3LO75121 409 aa7.76□□□□□ -1.17
CBX3-206ENST00000481057 POU2F2P09086 479 aa7.76□□□□□ -1.17
CBX3-206ENST00000481057 FPR1P21462 350 aa7.76□□□□□ -1.17
CBX3-206ENST00000481057 PCSK1P29120 753 aa7.76□□□□□ -1.17
CBX3-206ENST00000481057 GCLCP48506 637 aaPredicted RBP7.76□□□□□ -1.17
CBX3-206ENST00000481057 CDC42EP1Q00587 391 aa7.76□□□□□ -1.17
CBX3-206ENST00000481057 TARDBPQ13148 414 aaKnown RBP eCLIP7.76□□□□□ -1.175e-12■□□□□ 9.5
CBX3-206ENST00000481057 MTM1Q13496 603 aa7.76□□□□□ -1.17
CBX3-206ENST00000481057 SPATS1Q496A3 300 aa7.76□□□□□ -1.17
CBX3-206ENST00000481057 CATIPQ7Z7H3 387 aa7.76□□□□□ -1.17
CBX3-206ENST00000481057 XYLT1Q86Y38 959 aa7.76□□□□□ -1.17
CBX3-206ENST00000481057 MB21D1Q8N884 522 aa7.76□□□□□ -1.17
CBX3-206ENST00000481057 TMEM105Q8N8V8 129 aa7.76□□□□□ -1.17
CBX3-206ENST00000481057 GDPD5Q8WTR4 605 aa7.76□□□□□ -1.17
CBX3-206ENST00000481057 RUBCNQ92622 972 aa7.76□□□□□ -1.17
CBX3-206ENST00000481057 RAB24Q969Q5 203 aa7.76□□□□□ -1.17
CBX3-206ENST00000481057 CPPED1Q9BRF8 314 aaPredicted RBP7.76□□□□□ -1.17
CBX3-206ENST00000481057 RTKNQ9BST9 563 aa7.76□□□□□ -1.17
CBX3-206ENST00000481057 ZNF341Q9BYN7 854 aa7.76□□□□□ -1.17
CBX3-206ENST00000481057 CPEB1Q9BZB8 566 aaKnown RBP7.76□□□□□ -1.17
CBX3-206ENST00000481057 TDP1Q9NUW8 608 aa7.76□□□□□ -1.17
CBX3-206ENST00000481057 MOCS1Q9NZB8 636 aa7.76□□□□□ -1.17
CBX3-206ENST00000481057 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.76□□□□□ -1.17
CBX3-206ENST00000481057 TCEAL9Q9UHQ7 104 aa7.76□□□□□ -1.17
CBX3-206ENST00000481057 CFAP20Q9Y6A4 193 aaKnown RBP7.76□□□□□ -1.17
CBX3-206ENST00000481057 COL4A4P53420 1690 aaPredicted RBP7.76□□□□□ -1.17
CBX3-206ENST00000481057 ABCA12Q86UK0 2595 aa7.75□□□□□ -1.17
CBX3-206ENST00000481057 CXorf49A8MYA2 514 aaPredicted RBP7.75□□□□□ -1.17
CBX3-206ENST00000481057 DTNBO60941 627 aa7.75□□□□□ -1.17
CBX3-206ENST00000481057 HMOX1P09601 288 aa7.75□□□□□ -1.17
CBX3-206ENST00000481057 PDCP20941 246 aa7.75□□□□□ -1.17
CBX3-206ENST00000481057 ALDH1A3P47895 512 aa7.75□□□□□ -1.17
CBX3-206ENST00000481057 ADAM17P78536 824 aa7.75□□□□□ -1.17
CBX3-206ENST00000481057 ATP8B2P98198 1209 aa7.75□□□□□ -1.17
CBX3-206ENST00000481057 C1QL3Q5VWW1 255 aa7.75□□□□□ -1.17
CBX3-206ENST00000481057 AFMIDQ63HM1 303 aa7.75□□□□□ -1.17
CBX3-206ENST00000481057 ANKS6Q68DC2 871 aa7.75□□□□□ -1.17
CBX3-206ENST00000481057 PPP4R3AQ6IN85 833 aa7.75□□□□□ -1.17
CBX3-206ENST00000481057 GPRIN1Q7Z2K8 1008 aa7.75□□□□□ -1.17
CBX3-206ENST00000481057 FAM83AQ86UY5 434 aa7.75□□□□□ -1.17
CBX3-206ENST00000481057 PRR18Q8N4B5 295 aa7.75□□□□□ -1.17
CBX3-206ENST00000481057 TRPV1Q8NER1 839 aa7.75□□□□□ -1.17
CBX3-206ENST00000481057 OR52N2Q8NGI0 321 aa7.75□□□□□ -1.17
CBX3-206ENST00000481057 CYP2W1Q8TAV3 490 aa7.75□□□□□ -1.17
CBX3-206ENST00000481057 STON2Q8WXE9 905 aa7.75□□□□□ -1.17
CBX3-206ENST00000481057 DVL3Q92997 716 aaPredicted RBP7.75□□□□□ -1.17
CBX3-206ENST00000481057 RIPOR3Q96MK2 946 aa7.75□□□□□ -1.17
CBX3-206ENST00000481057 C1QTNF3Q9BXJ4 246 aa7.75□□□□□ -1.17
CBX3-206ENST00000481057 GTPBP4Q9BZE4 634 aaKnown RBP7.75□□□□□ -1.17
CBX3-206ENST00000481057 FLRT1Q9NZU1 646 aa7.75□□□□□ -1.17
CBX3-206ENST00000481057 ZHX2Q9Y6X8 837 aa7.75□□□□□ -1.17
CBX3-206ENST00000481057 LOC400499M0QZD8 3231 aa7.74□□□□□ -1.17
CBX3-206ENST00000481057 MUSKO15146 869 aa7.74□□□□□ -1.17
CBX3-206ENST00000481057 PJA2O43164 708 aa7.74□□□□□ -1.17
CBX3-206ENST00000481057 HSP90B1P14625 803 aaKnown RBP7.74□□□□□ -1.17
CBX3-206ENST00000481057 ZNF20P17024 532 aa7.74□□□□□ -1.17
CBX3-206ENST00000481057 DDCP20711 480 aa7.74□□□□□ -1.17
CBX3-206ENST00000481057 PRKD1Q15139 912 aaPredicted RBP7.74□□□□□ -1.17
CBX3-206ENST00000481057 CDSNQ15517 529 aa7.74□□□□□ -1.17
CBX3-206ENST00000481057 DCAF17Q5H9S7 520 aaPredicted RBP7.74□□□□□ -1.17
CBX3-206ENST00000481057 METTL24Q5JXM2 366 aa7.74□□□□□ -1.17
CBX3-206ENST00000481057 USP45Q70EL2 814 aa7.74□□□□□ -1.17
CBX3-206ENST00000481057 HTR3DQ70Z44 454 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms