RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 OPTNQ96CV9 577 aa21.6■■□□□ 1.05
COL13A1-208ENST00000479733 TAAR1Q96RJ0 339 aa21.6■■□□□ 1.05
COL13A1-208ENST00000479733 SLC9A2Q9UBY0 812 aa21.6■■□□□ 1.05
COL13A1-208ENST00000479733 TELO2Q9Y4R8 837 aa21.6■■□□□ 1.05
COL13A1-208ENST00000479733 CXorf49A8MYA2 514 aaPredicted RBP21.59■■□□□ 1.05
COL13A1-208ENST00000479733 UGT1A9O60656 530 aa21.59■■□□□ 1.05
COL13A1-208ENST00000479733 SLC18A2Q05940 514 aa21.59■■□□□ 1.05
COL13A1-208ENST00000479733 ASPHQ12797 758 aa21.59■■□□□ 1.05
COL13A1-208ENST00000479733 TAF5Q15542 800 aa21.59■■□□□ 1.05
COL13A1-208ENST00000479733 RALGPS1Q5JS13 557 aa21.59■■□□□ 1.05
COL13A1-208ENST00000479733 MARK2Q7KZI7 788 aaKnown RBP21.59■■□□□ 1.05
COL13A1-208ENST00000479733 ARHGAP18Q8N392 663 aa21.59■■□□□ 1.05
COL13A1-208ENST00000479733 JDP2Q8WYK2 163 aa21.59■■□□□ 1.05
COL13A1-208ENST00000479733 UGT1A7Q9HAW7 530 aa21.59■■□□□ 1.05
COL13A1-208ENST00000479733 UGT1A10Q9HAW8 530 aa21.59■■□□□ 1.05
COL13A1-208ENST00000479733 UGT1A8Q9HAW9 530 aa21.59■■□□□ 1.05
COL13A1-208ENST00000479733 TJP2Q9UDY2 1190 aa21.59■■□□□ 1.05
COL13A1-208ENST00000479733 EP400Q96L91 3159 aa21.59■■□□□ 1.05
COL13A1-208ENST00000479733 LYPLA2O95372 231 aa21.59■■□□□ 1.05
COL13A1-208ENST00000479733 RFC1P35251 1148 aaPredicted RBP21.59■■□□□ 1.05
COL13A1-208ENST00000479733 EIF3EP60228 445 aaKnown RBP21.59■■□□□ 1.05
COL13A1-208ENST00000479733 OR6Y1Q8NGX8 325 aa21.59■■□□□ 1.05
COL13A1-208ENST00000479733 CYP4F11Q9HBI6 524 aa21.59■■□□□ 1.05
COL13A1-208ENST00000479733 CLIC5Q9NZA1 410 aa21.59■■□□□ 1.05
COL13A1-208ENST00000479733 GABBR1Q9UBS5 961 aa21.59■■□□□ 1.05
COL13A1-208ENST00000479733 E7ESA3 106 aa21.59■■□□□ 1.05
COL13A1-208ENST00000479733 EXTL3O43909 919 aa21.59■■□□□ 1.05
COL13A1-208ENST00000479733 DPYSL3Q14195 570 aa21.59■■□□□ 1.05
COL13A1-208ENST00000479733 FAXCQ5TGI0 409 aa21.59■■□□□ 1.05
COL13A1-208ENST00000479733 NPNTQ6UXI9 565 aa21.59■■□□□ 1.05
COL13A1-208ENST00000479733 SATL1Q86VE3 508 aa21.59■■□□□ 1.05
COL13A1-208ENST00000479733 SESTD1Q86VW0 696 aa21.59■■□□□ 1.05
COL13A1-208ENST00000479733 EMC1Q8N766 993 aa21.59■■□□□ 1.05
COL13A1-208ENST00000479733 LRRN4Q8WUT4 740 aa21.59■■□□□ 1.05
COL13A1-208ENST00000479733 TRIM56Q9BRZ2 755 aaKnown RBP21.59■■□□□ 1.05
COL13A1-208ENST00000479733 CALN1Q9BXU9 219 aa21.59■■□□□ 1.05
COL13A1-208ENST00000479733 WWP1Q9H0M0 922 aa21.59■■□□□ 1.05
COL13A1-208ENST00000479733 RBAKQ9NYW8 714 aaPredicted RBP21.59■■□□□ 1.05
COL13A1-208ENST00000479733 AGO2Q9UKV8 859 aaKnown RBP21.59■■□□□ 1.05
COL13A1-208ENST00000479733 RBP3P10745 1247 aa21.58■■□□□ 1.05
COL13A1-208ENST00000479733 GRIA2P42262 883 aa21.58■■□□□ 1.05
COL13A1-208ENST00000479733 LRRC38Q5VT99 294 aa21.58■■□□□ 1.05
COL13A1-208ENST00000479733 HSPH1Q92598 858 aa21.58■■□□□ 1.05
COL13A1-208ENST00000479733 MASTLQ96GX5 879 aa21.58■■□□□ 1.05
COL13A1-208ENST00000479733 MMP19Q99542 508 aa21.58■■□□□ 1.05
COL13A1-208ENST00000479733 APOL6Q9BWW8 343 aa21.58■■□□□ 1.05
COL13A1-208ENST00000479733 TBC1D22BQ9NU19 505 aa21.58■■□□□ 1.05
COL13A1-208ENST00000479733 ETNK2Q9NVF9 386 aa21.58■■□□□ 1.05
COL13A1-208ENST00000479733 UBIAD1Q9Y5Z9 338 aa21.58■■□□□ 1.05
COL13A1-208ENST00000479733 C3orf70A6NLC5 250 aaPredicted RBP21.58■■□□□ 1.04
COL13A1-208ENST00000479733 WDR64B1ANS9 1081 aa21.58■■□□□ 1.04
COL13A1-208ENST00000479733 BUD23O43709 281 aaKnown RBP21.58■■□□□ 1.04
COL13A1-208ENST00000479733 CREB3O43889 395 aa21.58■■□□□ 1.04
COL13A1-208ENST00000479733 HIRAP54198 1017 aaPredicted RBP21.58■■□□□ 1.04
COL13A1-208ENST00000479733 AQP4P55087 323 aa21.58■■□□□ 1.04
COL13A1-208ENST00000479733 MED21Q13503 144 aa21.58■■□□□ 1.04
COL13A1-208ENST00000479733 GPAT2Q6NUI2 795 aa21.58■■□□□ 1.04
COL13A1-208ENST00000479733 TMX4Q9H1E5 349 aaPredicted RBP21.58■■□□□ 1.04
COL13A1-208ENST00000479733 DDX56Q9NY93 547 aaKnown RBP21.58■■□□□ 1.04
COL13A1-208ENST00000479733 hCG_2014768A0A024R1R8 64 aa21.57■■□□□ 1.04
COL13A1-208ENST00000479733 PGM3O95394 542 aa21.57■■□□□ 1.04
COL13A1-208ENST00000479733 GARTP22102 1010 aa21.57■■□□□ 1.04
COL13A1-208ENST00000479733 DLG1Q12959 904 aa21.57■■□□□ 1.04
COL13A1-208ENST00000479733 PIGHQ14442 188 aaPredicted RBP21.57■■□□□ 1.04
COL13A1-208ENST00000479733 HIC1Q14526 733 aa21.57■■□□□ 1.04
COL13A1-208ENST00000479733 PSMD6Q15008 389 aa21.57■■□□□ 1.04
COL13A1-208ENST00000479733 DNAL1Q4LDG9 190 aa21.57■■□□□ 1.04
COL13A1-208ENST00000479733 RNF111Q6ZNA4 994 aa21.57■■□□□ 1.04
COL13A1-208ENST00000479733 CRLF3Q8IUI8 442 aa21.57■■□□□ 1.04
COL13A1-208ENST00000479733 JOSD2Q8TAC2 188 aa21.57■■□□□ 1.04
COL13A1-208ENST00000479733 POLRMTO00411 1230 aaKnown RBP21.57■■□□□ 1.04
COL13A1-208ENST00000479733 ZNF862O60290 1169 aa21.57■■□□□ 1.04
COL13A1-208ENST00000479733 MAP3K6O95382 1288 aa21.57■■□□□ 1.04
COL13A1-208ENST00000479733 CALB1P05937 261 aa21.57■■□□□ 1.04
COL13A1-208ENST00000479733 HSD17B4P51659 736 aa21.57■■□□□ 1.04
COL13A1-208ENST00000479733 MRPS5P82675 430 aaKnown RBP21.57■■□□□ 1.04
COL13A1-208ENST00000479733 PLLPQ9Y342 182 aa21.57■■□□□ 1.04
COL13A1-208ENST00000479733 A0A088AWK7 358 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 PEX2P28328 305 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 SCARA5Q6ZMJ2 495 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 KIAA0319LQ8IZA0 1049 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 KCTD6Q8NC69 237 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 SPATA18Q8TC71 538 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 CCDC106Q9BWC9 280 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 S100A14Q9HCY8 104 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 ADAMTS6Q9UKP5 1117 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 NDC80O14777 642 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 STAM2O75886 525 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 CST3P01034 146 aaPredicted RBP21.56■■□□□ 1.04
COL13A1-208ENST00000479733 SERPINB6P35237 376 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 MCCD1P59942 119 aaPredicted RBP21.56■■□□□ 1.04
COL13A1-208ENST00000479733 PEX6Q13608 980 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 NCOA4Q13772 614 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.56■■□□□ 1.04
COL13A1-208ENST00000479733 DACT2Q5SW24 774 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 ATG16L1Q676U5 607 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 DARS2Q6PI48 645 aaKnown RBP21.56■■□□□ 1.04
COL13A1-208ENST00000479733 PODNQ7Z5L7 613 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 SLC26A11Q86WA9 606 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 CDAN1Q8IWY9 1227 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms