RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 SSU72Q9NP77 194 aaKnown RBP13.92□□□□□ -0.18
PDZRN3-208ENST00000479530 hCG_1818297A0A087WSY0 165 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 H3BRJ5 948 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 ATP2A1O14983 1001 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 LPXNO60711 386 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 DNAJC6O75061 913 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 TMEM63AO94886 807 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 MYL6P60660 151 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 PRKD1Q15139 912 aaPredicted RBP13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 RASA2Q15283 850 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 ZNF677Q86XU0 584 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 ZFAND2BQ8WV99 257 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 OXNAD1Q96HP4 312 aaPredicted RBP13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 MTMR12Q9C0I1 747 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 VPS33BQ9H267 617 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 ACSS3Q9H6R3 686 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 GINM1Q9NU53 330 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 ADGRA2Q96PE1 1338 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 MAP3K7O43318 606 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 RNF8O76064 485 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 USP1O94782 785 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 SRGAP2CP0DJJ0 459 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 UBA1P22314 1058 aaKnown RBP13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 OSTNP61366 133 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 ORC1Q13415 861 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 SMTNL2Q2TAL5 461 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 BBS9Q3SYG4 887 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 CYP4A22Q5TCH4 519 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 CES4AQ5XG92 561 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 SCARA5Q6ZMJ2 495 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 CDHR3Q6ZTQ4 885 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 PRPF31Q8WWY3 499 aaKnown RBP13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 TFAP2BQ92481 460 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 MECRQ9BV79 373 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 PCDH9Q9HC56 1237 aa13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 COL11A1P12107 1806 aaPredicted RBP13.91□□□□□ -0.18
PDZRN3-208ENST00000479530 RLFQ13129 1914 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 TMEM191CA6NGB0 347 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 B2RBV5 119 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 TM9SF1O15321 606 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 TMEM191BP0C7N4 346 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 CDKN2BP42772 138 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 HIRAP54198 1017 aaPredicted RBP13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 LY6KQ17RY6 165 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 PHF13Q86YI8 300 aaPredicted RBP13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 LRRC71Q8N4P6 559 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 WDTC1Q8N5D0 677 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 SLC25A41Q8N5S1 370 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 ATP11CQ8NB49 1132 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 KLRG1Q96E93 195 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 RBM41Q96IZ5 413 aaKnown RBP13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 TUBGCP5Q96RT8 1024 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 BTBD7Q9P203 1132 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 CHMP2BQ9UQN3 213 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 DRG1Q9Y295 367 aaKnown RBP13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 SNCAIPQ9Y6H5 919 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 MAGEA13PA6NCF6 341 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 FAM155BO75949 473 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 ATG7O95352 703 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 ENO1P06733 434 aaKnown RBP13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 ITGAVP06756 1048 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 DHRS4L1P0CG22 281 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 PYGBP11216 843 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 STXBP2Q15833 593 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 KCNT1Q5JUK3 1230 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 CCDC62Q6P9F0 684 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 APLFQ8IW19 511 aaPredicted RBP13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 NAT8LQ8N9F0 302 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 PPFIBP2Q8ND30 876 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 RBM15BQ8NDT2 890 aaKnown RBP13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 SLC7A3Q8WY07 619 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 TCHPQ9BT92 498 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 PARVAQ9NVD7 372 aa13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 MTO1Q9Y2Z2 717 aaKnown RBP13.9□□□□□ -0.18
PDZRN3-208ENST00000479530 LYNP07948 512 aa13.89□□□□□ -0.19
PDZRN3-208ENST00000479530 NAMPTP43490 491 aa13.89□□□□□ -0.19
PDZRN3-208ENST00000479530 TGFB2P61812 414 aa13.89□□□□□ -0.19
PDZRN3-208ENST00000479530 FAAP100Q0VG06 881 aa13.89□□□□□ -0.19
PDZRN3-208ENST00000479530 TFDP3Q5H9I0 405 aa13.89□□□□□ -0.19
PDZRN3-208ENST00000479530 IZUMO2Q6UXV1 221 aa13.89□□□□□ -0.19
PDZRN3-208ENST00000479530 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.89□□□□□ -0.19
PDZRN3-208ENST00000479530 SLC35B2Q8TB61 432 aa13.89□□□□□ -0.19
PDZRN3-208ENST00000479530 ACTL9Q8TC94 416 aa13.89□□□□□ -0.19
PDZRN3-208ENST00000479530 TRAPPC12Q8WVT3 735 aa13.89□□□□□ -0.19
PDZRN3-208ENST00000479530 NKD2Q969F2 451 aaPredicted RBP13.89□□□□□ -0.19
PDZRN3-208ENST00000479530 TRAPPC9Q96Q05 1148 aa13.89□□□□□ -0.19
PDZRN3-208ENST00000479530 PANX3Q96QZ0 392 aa13.89□□□□□ -0.19
PDZRN3-208ENST00000479530 CGRRF1Q99675 332 aa13.89□□□□□ -0.19
PDZRN3-208ENST00000479530 ZNF212Q9UDV6 495 aa13.89□□□□□ -0.19
PDZRN3-208ENST00000479530 IP6K2Q9UHH9 426 aa13.89□□□□□ -0.19
PDZRN3-208ENST00000479530 WDR81Q562E7 1941 aa13.89□□□□□ -0.19
PDZRN3-208ENST00000479530 FAM189A1O60320 539 aa13.89□□□□□ -0.19
PDZRN3-208ENST00000479530 CSDE1O75534 798 aaKnown RBP13.89□□□□□ -0.19
PDZRN3-208ENST00000479530 MT-ND3P03897 115 aa13.89□□□□□ -0.19
PDZRN3-208ENST00000479530 YY1P25490 414 aa13.89□□□□□ -0.19
PDZRN3-208ENST00000479530 RPL22P35268 128 aaKnown RBP13.89□□□□□ -0.19
PDZRN3-208ENST00000479530 BPIFB4P59827 614 aa13.89□□□□□ -0.19
PDZRN3-208ENST00000479530 OTUD4Q01804 1114 aaKnown RBP13.89□□□□□ -0.19
PDZRN3-208ENST00000479530 KDSRQ06136 332 aa13.89□□□□□ -0.19
PDZRN3-208ENST00000479530 KRT72Q14CN4 511 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms