RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 SLC5A3P53794 718 aa16.36■□□□□ 0.21
C9orf3-217ENST00000479161 TAF10Q12962 218 aa16.36■□□□□ 0.21
C9orf3-217ENST00000479161 ORC1Q13415 861 aa16.36■□□□□ 0.21
C9orf3-217ENST00000479161 ZNF394Q53GI3 561 aa16.36■□□□□ 0.21
C9orf3-217ENST00000479161 TMEM270Q6UE05 265 aa16.36■□□□□ 0.21
C9orf3-217ENST00000479161 LCLAT1Q6UWP7 414 aa16.36■□□□□ 0.21
C9orf3-217ENST00000479161 CREBRFQ8IUR6 639 aa16.36■□□□□ 0.21
C9orf3-217ENST00000479161 ARHGEF19Q8IW93 802 aa16.36■□□□□ 0.21
C9orf3-217ENST00000479161 ANKRD20A12PQ8NF67 263 aa16.36■□□□□ 0.21
C9orf3-217ENST00000479161 IRF7Q92985 503 aa16.36■□□□□ 0.21
C9orf3-217ENST00000479161 TRMT61BQ9BVS5 477 aaKnown RBP16.36■□□□□ 0.21
C9orf3-217ENST00000479161 UBE2TQ9NPD8 197 aaPredicted RBP16.36■□□□□ 0.21
C9orf3-217ENST00000479161 TDP1Q9NUW8 608 aa16.36■□□□□ 0.21
C9orf3-217ENST00000479161 FANCLQ9NW38 375 aa16.36■□□□□ 0.21
C9orf3-217ENST00000479161 LIMA1Q9UHB6 759 aaKnown RBP16.36■□□□□ 0.21
C9orf3-217ENST00000479161 SCML2Q9UQR0 700 aa16.36■□□□□ 0.21
C9orf3-217ENST00000479161 PCDHB4Q9Y5E5 795 aa16.36■□□□□ 0.21
C9orf3-217ENST00000479161 USP3Q9Y6I4 520 aa16.36■□□□□ 0.21
C9orf3-217ENST00000479161 HELZP42694 1942 aaKnown RBP16.36■□□□□ 0.21
C9orf3-217ENST00000479161 ZNF318Q5VUA4 2279 aa16.36■□□□□ 0.21
C9orf3-217ENST00000479161 TRAV19A0A0A6YYK7 116 aa16.35■□□□□ 0.21
C9orf3-217ENST00000479161 SMTNL1A8MU46 457 aa16.35■□□□□ 0.21
C9orf3-217ENST00000479161 HEPACAM2A8MVW5 462 aa16.35■□□□□ 0.21
C9orf3-217ENST00000479161 O00370 1275 aa16.35■□□□□ 0.21
C9orf3-217ENST00000479161 CHADO15335 359 aa16.35■□□□□ 0.21
C9orf3-217ENST00000479161 USP17L7P0C7H9 530 aa16.35■□□□□ 0.21
C9orf3-217ENST00000479161 GLULP15104 373 aa16.35■□□□□ 0.21
C9orf3-217ENST00000479161 SLC9A1P19634 815 aa16.35■□□□□ 0.21
C9orf3-217ENST00000479161 COL9A1P20849 921 aa16.35■□□□□ 0.21
C9orf3-217ENST00000479161 PSEN1P49768 467 aa16.35■□□□□ 0.21
C9orf3-217ENST00000479161 KIF11P52732 1056 aa16.35■□□□□ 0.21
C9orf3-217ENST00000479161 BCAT1P54687 386 aa16.35■□□□□ 0.21
C9orf3-217ENST00000479161 MAP3K7CLP57077 242 aa16.35■□□□□ 0.21
C9orf3-217ENST00000479161 CYP4F8P98187 520 aa16.35■□□□□ 0.21
C9orf3-217ENST00000479161 PLCB2Q00722 1185 aa16.35■□□□□ 0.21
C9orf3-217ENST00000479161 PKDCCQ504Y2 493 aa16.35■□□□□ 0.21
C9orf3-217ENST00000479161 RAB41Q5JT25 222 aa16.35■□□□□ 0.21
C9orf3-217ENST00000479161 STXBP5Q5T5C0 1151 aa16.35■□□□□ 0.21
C9orf3-217ENST00000479161 DPY19L2P1Q6NXN4 242 aa16.35■□□□□ 0.21
C9orf3-217ENST00000479161 VITQ6UXI7 678 aa16.35■□□□□ 0.21
C9orf3-217ENST00000479161 RRAGAQ7L523 313 aa16.35■□□□□ 0.21
C9orf3-217ENST00000479161 SCML4Q8N228 414 aa16.35■□□□□ 0.21
C9orf3-217ENST00000479161 MAB21L3Q8N8X9 362 aa16.35■□□□□ 0.21
C9orf3-217ENST00000479161 STKLD1Q8NE28 680 aa16.35■□□□□ 0.21
C9orf3-217ENST00000479161 SHC3Q92529 594 aa16.35■□□□□ 0.21
C9orf3-217ENST00000479161 CRACR2AQ9BSW2 395 aa16.35■□□□□ 0.21
C9orf3-217ENST00000479161 PLA2G2FQ9BZM2 168 aa16.35■□□□□ 0.21
C9orf3-217ENST00000479161 PLCB1Q9NQ66 1216 aa16.35■□□□□ 0.21
C9orf3-217ENST00000479161 RNF225M0QZC1 329 aaPredicted RBP16.34■□□□□ 0.21
C9orf3-217ENST00000479161 XPO1O14980 1071 aaKnown RBP16.34■□□□□ 0.21
C9orf3-217ENST00000479161 OAS1P00973 400 aaKnown RBP16.34■□□□□ 0.21
C9orf3-217ENST00000479161 SETSIPP0DME0 302 aa16.34■□□□□ 0.21
C9orf3-217ENST00000479161 ADORA2BP29275 332 aa16.34■□□□□ 0.21
C9orf3-217ENST00000479161 NUBP1P53384 320 aa16.34■□□□□ 0.21
C9orf3-217ENST00000479161 GPC5P78333 572 aa16.34■□□□□ 0.21
C9orf3-217ENST00000479161 SLC7A9P82251 487 aa16.34■□□□□ 0.21
C9orf3-217ENST00000479161 PRKCQQ04759 706 aa16.34■□□□□ 0.21
C9orf3-217ENST00000479161 KRT31Q15323 416 aa16.34■□□□□ 0.21
C9orf3-217ENST00000479161 ANO6Q4KMQ2 910 aa16.34■□□□□ 0.21
C9orf3-217ENST00000479161 ARHGAP29Q52LW3 1261 aa16.34■□□□□ 0.21
C9orf3-217ENST00000479161 TXNDC8Q6A555 127 aa16.34■□□□□ 0.21
C9orf3-217ENST00000479161 KLHDC10Q6PID8 442 aa16.34■□□□□ 0.21
C9orf3-217ENST00000479161 C1orf228Q6PIY5 440 aa16.34■□□□□ 0.21
C9orf3-217ENST00000479161 CCDC186Q7Z3E2 898 aa16.34■□□□□ 0.21
C9orf3-217ENST00000479161 BPIFB1Q8TDL5 484 aa16.34■□□□□ 0.21
C9orf3-217ENST00000479161 KCTD13Q8WZ19 329 aa16.34■□□□□ 0.21
C9orf3-217ENST00000479161 KAT5Q92993 513 aa16.34■□□□□ 0.21
C9orf3-217ENST00000479161 MSANTD3Q96H12 275 aa16.34■□□□□ 0.21
C9orf3-217ENST00000479161 SHDQ96IW2 340 aa16.34■□□□□ 0.21
C9orf3-217ENST00000479161 KXD1Q9BQD3 176 aa16.34■□□□□ 0.21
C9orf3-217ENST00000479161 LRFN3Q9BTN0 628 aa16.34■□□□□ 0.21
C9orf3-217ENST00000479161 HSD3B7Q9H2F3 369 aa16.34■□□□□ 0.21
C9orf3-217ENST00000479161 SIX2Q9NPC8 291 aa16.34■□□□□ 0.21
C9orf3-217ENST00000479161 HESX1Q9UBX0 185 aa16.34■□□□□ 0.21
C9orf3-217ENST00000479161 TSPAN16Q9UKR8 245 aa16.34■□□□□ 0.21
C9orf3-217ENST00000479161 ARHGAP26Q9UNA1 814 aa16.34■□□□□ 0.21
C9orf3-217ENST00000479161 ARNTLO00327 626 aa16.33■□□□□ 0.2
C9orf3-217ENST00000479161 DPYSL4O14531 572 aa16.33■□□□□ 0.2
C9orf3-217ENST00000479161 NARSO43776 548 aaKnown RBP16.33■□□□□ 0.2
C9orf3-217ENST00000479161 HDCP19113 662 aa16.33■□□□□ 0.2
C9orf3-217ENST00000479161 VIPR2P41587 438 aa16.33■□□□□ 0.2
C9orf3-217ENST00000479161 PLA2G4AP47712 749 aa16.33■□□□□ 0.2
C9orf3-217ENST00000479161 ZNF165P49910 485 aa16.33■□□□□ 0.2
C9orf3-217ENST00000479161 CLCN5P51795 746 aa16.33■□□□□ 0.2
C9orf3-217ENST00000479161 STARD6P59095 220 aa16.33■□□□□ 0.2
C9orf3-217ENST00000479161 BST2Q10589 180 aaKnown RBP16.33■□□□□ 0.2
C9orf3-217ENST00000479161 KCNMA1Q12791 1236 aa16.33■□□□□ 0.2
C9orf3-217ENST00000479161 PM20D1Q6GTS8 502 aa16.33■□□□□ 0.2
C9orf3-217ENST00000479161 TTC30AQ86WT1 665 aa16.33■□□□□ 0.2
C9orf3-217ENST00000479161 RBBP8NLQ8NC74 664 aaPredicted RBP16.33■□□□□ 0.2
C9orf3-217ENST00000479161 SCAMP5Q8TAC9 235 aa16.33■□□□□ 0.2
C9orf3-217ENST00000479161 USP13Q92995 863 aaPredicted RBP16.33■□□□□ 0.2
C9orf3-217ENST00000479161 FBXO32Q969P5 355 aa16.33■□□□□ 0.2
C9orf3-217ENST00000479161 TLR8Q9NR97 1041 aaKnown RBP16.33■□□□□ 0.2
C9orf3-217ENST00000479161 THG1LQ9NWX6 298 aaKnown RBP16.33■□□□□ 0.2
C9orf3-217ENST00000479161 CLIC5Q9NZA1 410 aa16.33■□□□□ 0.2
C9orf3-217ENST00000479161 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.33■□□□□ 0.2
C9orf3-217ENST00000479161 ZNF263O14978 683 aa16.32■□□□□ 0.2
C9orf3-217ENST00000479161 MED7O43513 233 aa16.32■□□□□ 0.2
C9orf3-217ENST00000479161 PRAMEF12O95522 483 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms