RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 NXF1Q9UBU9 619 aaKnown RBP14.11□□□□□ -0.15
VCL-205ENST00000478896 ANGPTL2Q9UKU9 493 aa14.11□□□□□ -0.15
VCL-205ENST00000478896 CIZ1Q9ULV3 898 aaPredicted RBP14.11□□□□□ -0.15
VCL-205ENST00000478896 INVSQ9Y283 1065 aa14.11□□□□□ -0.15
VCL-205ENST00000478896 ATP8B3O60423 1300 aa14.11□□□□□ -0.15
VCL-205ENST00000478896 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.1□□□□□ -0.15
VCL-205ENST00000478896 TGFB1I1O43294 461 aa14.1□□□□□ -0.15
VCL-205ENST00000478896 OAS1P00973 400 aaKnown RBP14.1□□□□□ -0.15
VCL-205ENST00000478896 PTPN1P18031 435 aaKnown RBP14.1□□□□□ -0.15
VCL-205ENST00000478896 HOXD13P35453 343 aa14.1□□□□□ -0.15
VCL-205ENST00000478896 SLC7A9P82251 487 aa14.1□□□□□ -0.15
VCL-205ENST00000478896 BIRC3Q13489 604 aa14.1□□□□□ -0.15
VCL-205ENST00000478896 N4BP2L1Q5TBK1 243 aaPredicted RBP14.1□□□□□ -0.15
VCL-205ENST00000478896 UNC13DQ70J99 1090 aa14.1□□□□□ -0.15
VCL-205ENST00000478896 EPM2AIP1Q7L775 607 aaPredicted RBP14.1□□□□□ -0.15
VCL-205ENST00000478896 DDX42Q86XP3 938 aaKnown RBP eCLIP14.1□□□□□ -0.15
VCL-205ENST00000478896 CCDC33Q8N5R6 958 aa14.1□□□□□ -0.15
VCL-205ENST00000478896 B3GALNT2Q8NCR0 500 aa14.1□□□□□ -0.15
VCL-205ENST00000478896 SYAP1Q96A49 352 aaPredicted RBP14.1□□□□□ -0.15
VCL-205ENST00000478896 ZNF518BQ9C0D4 1074 aa14.1□□□□□ -0.15
VCL-205ENST00000478896 RNF38Q9H0F5 515 aa14.1□□□□□ -0.15
VCL-205ENST00000478896 MAGEF1Q9HAY2 307 aa14.1□□□□□ -0.15
VCL-205ENST00000478896 CFAP97Q9P2B7 532 aa14.1□□□□□ -0.15
VCL-205ENST00000478896 TFIP11Q9UBB9 837 aaKnown RBP14.1□□□□□ -0.15
VCL-205ENST00000478896 MMP17Q9ULZ9 603 aa14.1□□□□□ -0.15
VCL-205ENST00000478896 NME7Q9Y5B8 376 aa14.1□□□□□ -0.15
VCL-205ENST00000478896 BCLAF3A2AJT9 711 aaKnown RBP14.09□□□□□ -0.15
VCL-205ENST00000478896 K7EQS6 105 aa14.09□□□□□ -0.15
VCL-205ENST00000478896 CLDN5O00501 218 aa14.09□□□□□ -0.15
VCL-205ENST00000478896 EXOC3O60645 756 aa14.09□□□□□ -0.15
VCL-205ENST00000478896 CUTAO60888 179 aa14.09□□□□□ -0.15
VCL-205ENST00000478896 ALDH1A2O94788 518 aa14.09□□□□□ -0.15
VCL-205ENST00000478896 YEATS4O95619 227 aa14.09□□□□□ -0.15
VCL-205ENST00000478896 OLFM2O95897 454 aa14.09□□□□□ -0.15
VCL-205ENST00000478896 ADH1CP00326 375 aa14.09□□□□□ -0.15
VCL-205ENST00000478896 APODP05090 189 aa14.09□□□□□ -0.15
VCL-205ENST00000478896 TIE1P35590 1138 aa14.09□□□□□ -0.15
VCL-205ENST00000478896 CACNA2D1P54289 1103 aa14.09□□□□□ -0.15
VCL-205ENST00000478896 MYL6P60660 151 aa14.09□□□□□ -0.15
VCL-205ENST00000478896 SNRPFP62306 86 aaKnown RBP14.09□□□□□ -0.15
VCL-205ENST00000478896 DHCR24Q15392 516 aa14.09□□□□□ -0.15
VCL-205ENST00000478896 FOXD4L5Q5VV16 416 aaPredicted RBP14.09□□□□□ -0.15
VCL-205ENST00000478896 PMS2CLQ68D20 193 aa14.09□□□□□ -0.15
VCL-205ENST00000478896 CYP2U1Q7Z449 544 aa14.09□□□□□ -0.15
VCL-205ENST00000478896 NUP93Q8N1F7 819 aa14.09□□□□□ -0.15
VCL-205ENST00000478896 PDZD8Q8NEN9 1154 aa14.09□□□□□ -0.15
VCL-205ENST00000478896 MDGA1Q8NFP4 955 aa14.09□□□□□ -0.15
VCL-205ENST00000478896 SCFD1Q8WVM8 642 aa14.09□□□□□ -0.15
VCL-205ENST00000478896 FOXD4L4Q8WXT5 416 aaPredicted RBP14.09□□□□□ -0.15
VCL-205ENST00000478896 FBXO32Q969P5 355 aa14.09□□□□□ -0.15
VCL-205ENST00000478896 CNOT6LQ96LI5 555 aaKnown RBP14.09□□□□□ -0.15
VCL-205ENST00000478896 C7orf25Q9BPX7 421 aa14.09□□□□□ -0.15
VCL-205ENST00000478896 MED10Q9BTT4 135 aa14.09□□□□□ -0.15
VCL-205ENST00000478896 LSM14BQ9BX40 385 aaKnown RBP14.09□□□□□ -0.15
VCL-205ENST00000478896 BLZF1Q9H2G9 400 aa14.09□□□□□ -0.15
VCL-205ENST00000478896 BCCIPQ9P287 314 aaKnown RBP eCLIP14.09□□□□□ -0.15
VCL-205ENST00000478896 MYH10P35580 1976 aa14.09□□□□□ -0.15
VCL-205ENST00000478896 MYOFQ9NZM1 2061 aa14.08□□□□□ -0.15
VCL-205ENST00000478896 TM4SF5O14894 197 aa14.08□□□□□ -0.16
VCL-205ENST00000478896 POLR2DO15514 142 aaKnown RBP14.08□□□□□ -0.16
VCL-205ENST00000478896 RTN3O95197 1032 aaPredicted RBP14.08□□□□□ -0.16
VCL-205ENST00000478896 KCNK5O95279 499 aa14.08□□□□□ -0.16
VCL-205ENST00000478896 FAM163BP0C2L3 166 aa14.08□□□□□ -0.16
VCL-205ENST00000478896 ADH5P11766 374 aa14.08□□□□□ -0.16
VCL-205ENST00000478896 YWHAQP27348 245 aa14.08□□□□□ -0.16
VCL-205ENST00000478896 CASP1P29466 404 aa14.08□□□□□ -0.16
VCL-205ENST00000478896 PMLP29590 882 aa14.08□□□□□ -0.16
VCL-205ENST00000478896 ATICP31939 592 aa14.08□□□□□ -0.16
VCL-205ENST00000478896 DHPSP49366 369 aaPredicted RBP14.08□□□□□ -0.16
VCL-205ENST00000478896 MRPS21P82921 87 aaKnown RBP14.08□□□□□ -0.16
VCL-205ENST00000478896 KDSRQ06136 332 aa14.08□□□□□ -0.16
VCL-205ENST00000478896 CRY1Q16526 586 aa14.08□□□□□ -0.16
VCL-205ENST00000478896 GAB4Q2WGN9 574 aa14.08□□□□□ -0.16
VCL-205ENST00000478896 ZNF699Q32M78 642 aa14.08□□□□□ -0.16
VCL-205ENST00000478896 FOXD4L6Q3SYB3 417 aaPredicted RBP14.08□□□□□ -0.16
VCL-205ENST00000478896 DAB2IPQ5VWQ8 1189 aa14.08□□□□□ -0.16
VCL-205ENST00000478896 PSAPL1Q6NUJ1 521 aa14.08□□□□□ -0.16
VCL-205ENST00000478896 CNNM4Q6P4Q7 775 aa14.08□□□□□ -0.16
VCL-205ENST00000478896 SHC4Q6S5L8 630 aa14.08□□□□□ -0.16
VCL-205ENST00000478896 FOXD4L3Q6VB84 417 aaPredicted RBP14.08□□□□□ -0.16
VCL-205ENST00000478896 SCARA5Q6ZMJ2 495 aa14.08□□□□□ -0.16
VCL-205ENST00000478896 RASSF3Q86WH2 238 aa14.08□□□□□ -0.16
VCL-205ENST00000478896 ADGRG2Q8IZP9 1017 aa14.08□□□□□ -0.16
VCL-205ENST00000478896 ALLCQ8N6M5 410 aa14.08□□□□□ -0.16
VCL-205ENST00000478896 KIAA1958Q8N8K9 716 aa14.08□□□□□ -0.16
VCL-205ENST00000478896 TXNDC5Q8NBS9 432 aaKnown RBP14.08□□□□□ -0.16
VCL-205ENST00000478896 SPACA7Q96KW9 195 aa14.08□□□□□ -0.16
VCL-205ENST00000478896 PNKPQ96T60 521 aa14.08□□□□□ -0.16
VCL-205ENST00000478896 NACA2Q9H009 215 aa14.08□□□□□ -0.16
VCL-205ENST00000478896 POLMQ9NP87 494 aaPredicted RBP14.08□□□□□ -0.16
VCL-205ENST00000478896 SLC39A2Q9NP94 309 aa14.08□□□□□ -0.16
VCL-205ENST00000478896 FAM13BQ9NYF5 915 aa14.08□□□□□ -0.16
VCL-205ENST00000478896 TBC1D14Q9P2M4 693 aa14.08□□□□□ -0.16
VCL-205ENST00000478896 SH3BP1Q9Y3L3 701 aa14.08□□□□□ -0.16
VCL-205ENST00000478896 CACNA1BQ00975 2339 aa14.07□□□□□ -0.16
VCL-205ENST00000478896 LNP1A1A4G5 178 aa14.07□□□□□ -0.16
VCL-205ENST00000478896 ANTXRLA6NF34 631 aa14.07□□□□□ -0.16
VCL-205ENST00000478896 C4orf47A7E2U8 309 aa14.07□□□□□ -0.16
VCL-205ENST00000478896 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.07□□□□□ -0.16
VCL-205ENST00000478896 KHNYNO15037 678 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms