RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 HIPK2Q9H2X6 1198 aa4.12□□□□□ -1.75
HPS3-205ENST00000478525 POT1Q9NUX5 634 aa4.12□□□□□ -1.75
HPS3-205ENST00000478525 AMFRQ9UKV5 643 aa4.12□□□□□ -1.75
HPS3-205ENST00000478525 PCDHA6Q9UN73 950 aa4.12□□□□□ -1.75
HPS3-205ENST00000478525 PROCRQ9UNN8 238 aa4.12□□□□□ -1.75
HPS3-205ENST00000478525 TLR2O60603 784 aa4.11□□□□□ -1.75
HPS3-205ENST00000478525 RNF8O76064 485 aa4.11□□□□□ -1.75
HPS3-205ENST00000478525 CDKN1CP49918 316 aaPredicted RBP4.11□□□□□ -1.75
HPS3-205ENST00000478525 ID2Q02363 134 aa4.11□□□□□ -1.75
HPS3-205ENST00000478525 CFHR1Q03591 330 aa4.11□□□□□ -1.75
HPS3-205ENST00000478525 DEF8Q6ZN54 512 aa4.11□□□□□ -1.75
HPS3-205ENST00000478525 CATIPQ7Z7H3 387 aa4.11□□□□□ -1.75
HPS3-205ENST00000478525 SIRT6Q8N6T7 355 aa4.11□□□□□ -1.75
HPS3-205ENST00000478525 CCDC17Q96LX7 622 aa4.11□□□□□ -1.75
HPS3-205ENST00000478525 CAMK1GQ96NX5 476 aa4.11□□□□□ -1.75
HPS3-205ENST00000478525 MESP1Q9BRJ9 268 aa4.11□□□□□ -1.75
HPS3-205ENST00000478525 TMX1Q9H3N1 280 aa4.11□□□□□ -1.75
HPS3-205ENST00000478525 TRMT13Q9NUP7 481 aaKnown RBP4.11□□□□□ -1.75
HPS3-205ENST00000478525 PI4KBQ9UBF8 816 aa4.11□□□□□ -1.75
HPS3-205ENST00000478525 LPAR3Q9UBY5 353 aa4.11□□□□□ -1.75
HPS3-205ENST00000478525 B4DGG1 531 aa4.1□□□□□ -1.75
HPS3-205ENST00000478525 CES2O00748 559 aa4.1□□□□□ -1.75
HPS3-205ENST00000478525 CNOT3O75175 753 aaKnown RBP4.1□□□□□ -1.75
HPS3-205ENST00000478525 MT-CO3P00414 261 aa4.1□□□□□ -1.75
HPS3-205ENST00000478525 KCNA3P22001 575 aa4.1□□□□□ -1.75
HPS3-205ENST00000478525 SLC11A2P49281 568 aa4.1□□□□□ -1.75
HPS3-205ENST00000478525 DGKEP52429 567 aa4.1□□□□□ -1.75
HPS3-205ENST00000478525 SATB1Q01826 763 aa4.1□□□□□ -1.75
HPS3-205ENST00000478525 KRT17Q04695 432 aa4.1□□□□□ -1.75
HPS3-205ENST00000478525 FAM50AQ14320 339 aaKnown RBP4.1□□□□□ -1.75
HPS3-205ENST00000478525 MLC1Q15049 377 aa4.1□□□□□ -1.75
HPS3-205ENST00000478525 KHDC1LQ5JSQ8 128 aa4.1□□□□□ -1.75
HPS3-205ENST00000478525 TMTC4Q5T4D3 741 aa4.1□□□□□ -1.75
HPS3-205ENST00000478525 UBAP2Q5T6F2 1119 aaKnown RBP4.1□□□□□ -1.75
HPS3-205ENST00000478525 KRTAP5-1Q6L8H4 278 aa4.1□□□□□ -1.75
HPS3-205ENST00000478525 KRT78Q8N1N4 520 aa4.1□□□□□ -1.75
HPS3-205ENST00000478525 TMEM171Q8WVE6 324 aa4.1□□□□□ -1.75
HPS3-205ENST00000478525 IGFBPL1Q8WX77 278 aa4.1□□□□□ -1.75
HPS3-205ENST00000478525 CTAGE1Q96RT6 745 aa4.1□□□□□ -1.75
HPS3-205ENST00000478525 FAM234AQ9H0X4 552 aa4.1□□□□□ -1.75
HPS3-205ENST00000478525 TMX2Q9Y320 296 aa4.1□□□□□ -1.75
HPS3-205ENST00000478525 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.1□□□□□ -1.75
HPS3-205ENST00000478525 POU2F2P09086 479 aa4.09□□□□□ -1.75
HPS3-205ENST00000478525 APEHP13798 732 aaKnown RBP4.09□□□□□ -1.75
HPS3-205ENST00000478525 GKP32189 559 aa4.09□□□□□ -1.75
HPS3-205ENST00000478525 WNT3P56703 355 aa4.09□□□□□ -1.75
HPS3-205ENST00000478525 LMAN2Q12907 356 aa4.09□□□□□ -1.75
HPS3-205ENST00000478525 LARS2Q15031 903 aaKnown RBP4.09□□□□□ -1.75
HPS3-205ENST00000478525 PGS1Q32NB8 556 aa4.09□□□□□ -1.75
HPS3-205ENST00000478525 CCDC157Q569K6 752 aa4.09□□□□□ -1.75
HPS3-205ENST00000478525 ANKRD13BQ86YJ7 626 aa4.09□□□□□ -1.75
HPS3-205ENST00000478525 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.09□□□□□ -1.75
HPS3-205ENST00000478525 PELI3Q8N2H9 469 aa4.09□□□□□ -1.75
HPS3-205ENST00000478525 ARFGAP1Q8N6T3 406 aa4.09□□□□□ -1.75
HPS3-205ENST00000478525 RSPRY1Q96DX4 576 aa4.09□□□□□ -1.75
HPS3-205ENST00000478525 C17orf80Q9BSJ5 609 aa4.09□□□□□ -1.75
HPS3-205ENST00000478525 SARS2Q9NP81 518 aaKnown RBP4.09□□□□□ -1.75
HPS3-205ENST00000478525 ZBTB40Q9NUA8 1239 aa4.09□□□□□ -1.75
HPS3-205ENST00000478525 ZNF112Q9UJU3 913 aa4.09□□□□□ -1.75
HPS3-205ENST00000478525 MED16Q9Y2X0 877 aa4.09□□□□□ -1.75
HPS3-205ENST00000478525 PMPCBO75439 489 aa4.08□□□□□ -1.76
HPS3-205ENST00000478525 CYP2C9P11712 490 aa4.08□□□□□ -1.76
HPS3-205ENST00000478525 CDK11BP21127 795 aaKnown RBP4.08□□□□□ -1.76
HPS3-205ENST00000478525 CCND1P24385 295 aa4.08□□□□□ -1.76
HPS3-205ENST00000478525 ME1P48163 572 aa4.08□□□□□ -1.76
HPS3-205ENST00000478525 COPB1P53618 953 aaKnown RBP4.08□□□□□ -1.76
HPS3-205ENST00000478525 SUMO2P61956 95 aaKnown RBP4.08□□□□□ -1.76
HPS3-205ENST00000478525 MGAT5BQ3V5L5 792 aa4.08□□□□□ -1.76
HPS3-205ENST00000478525 TMEM65Q6PI78 240 aa4.08□□□□□ -1.76
HPS3-205ENST00000478525 COLCA1Q6ZS62 124 aa4.08□□□□□ -1.76
HPS3-205ENST00000478525 PIM3Q86V86 326 aa4.08□□□□□ -1.76
HPS3-205ENST00000478525 LIX1LQ8IVB5 337 aa4.08□□□□□ -1.76
HPS3-205ENST00000478525 LINC01465Q8N7H1 131 aa4.08□□□□□ -1.76
HPS3-205ENST00000478525 PPP1R10Q96QC0 940 aaKnown RBP4.08□□□□□ -1.76
HPS3-205ENST00000478525 SMAD5Q99717 465 aaKnown RBP4.08□□□□□ -1.76
HPS3-205ENST00000478525 GTPBP4Q9BZE4 634 aaKnown RBP4.08□□□□□ -1.76
HPS3-205ENST00000478525 VPS33BQ9H267 617 aa4.08□□□□□ -1.76
HPS3-205ENST00000478525 HS3ST3B1Q9Y662 390 aa4.08□□□□□ -1.76
HPS3-205ENST00000478525 PRSS44E7EML9 344 aa4.07□□□□□ -1.76
HPS3-205ENST00000478525 TULP3O75386 442 aa4.07□□□□□ -1.76
HPS3-205ENST00000478525 CTSAP10619 480 aa4.07□□□□□ -1.76
HPS3-205ENST00000478525 PHKG2P15735 406 aa4.07□□□□□ -1.76
HPS3-205ENST00000478525 RECQLP46063 649 aaPredicted RBP4.07□□□□□ -1.76
HPS3-205ENST00000478525 DIO1P49895 249 aa4.07□□□□□ -1.76
HPS3-205ENST00000478525 PRKAG1P54619 331 aa4.07□□□□□ -1.76
HPS3-205ENST00000478525 NPY5RQ15761 445 aa4.07□□□□□ -1.76
HPS3-205ENST00000478525 C4orf46Q504U0 113 aa4.07□□□□□ -1.76
HPS3-205ENST00000478525 EGFLAMQ63HQ2 1017 aa4.07□□□□□ -1.76
HPS3-205ENST00000478525 ANO7Q6IWH7 933 aa4.07□□□□□ -1.76
HPS3-205ENST00000478525 ZNF549Q6P9A3 640 aa4.07□□□□□ -1.76
HPS3-205ENST00000478525 PTCHD4Q6ZW05 846 aa4.07□□□□□ -1.76
HPS3-205ENST00000478525 GAS2L3Q86XJ1 694 aa4.07□□□□□ -1.76
HPS3-205ENST00000478525 PLBD2Q8NHP8 589 aa4.07□□□□□ -1.76
HPS3-205ENST00000478525 MAFAQ8NHW3 353 aaPredicted RBP4.07□□□□□ -1.76
HPS3-205ENST00000478525 BPIFB1Q8TDL5 484 aa4.07□□□□□ -1.76
HPS3-205ENST00000478525 THOC3Q96J01 351 aaKnown RBP4.07□□□□□ -1.76
HPS3-205ENST00000478525 ZFYVE19Q96K21 471 aa4.07□□□□□ -1.76
HPS3-205ENST00000478525 MRGPRX1Q96LB2 322 aa4.07□□□□□ -1.76
HPS3-205ENST00000478525 SPC25Q9HBM1 224 aa4.07□□□□□ -1.76
HPS3-205ENST00000478525 CPA4Q9UI42 421 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms