RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 ASPAP45381 313 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 PMS1P54277 932 aaKnown RBP8.81□□□□□ -1
ERCC8-205ENST00000477893 NOP14P78316 857 aaKnown RBP8.81□□□□□ -1
ERCC8-205ENST00000477893 CLDN10P78369 228 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 CSTF1Q05048 431 aaKnown RBP8.81□□□□□ -1
ERCC8-205ENST00000477893 FCHO2Q0JRZ9 810 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 PON2Q15165 354 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 SGSM1Q2NKQ1 1148 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 ZCWPW2Q504Y3 356 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 ARHGAP29Q52LW3 1261 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 ZNF658Q5TYW1 1059 aaPredicted RBP8.81□□□□□ -1
ERCC8-205ENST00000477893 CC2D1AQ6P1N0 951 aaPredicted RBP8.81□□□□□ -1
ERCC8-205ENST00000477893 VSTM1Q6UX27 236 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 DENND5BQ6ZUT9 1274 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 FAM35AQ86V20 835 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 MON1AQ86VX9 555 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 CELF5Q8N6W0 485 aaKnown RBP8.81□□□□□ -1
ERCC8-205ENST00000477893 ARL14EPQ8N8R7 260 aaPredicted RBP8.81□□□□□ -1
ERCC8-205ENST00000477893 SLC2A14Q8TDB8 520 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 E2F7Q96AV8 911 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 DDX23Q9BUQ8 820 aaKnown RBP8.81□□□□□ -1
ERCC8-205ENST00000477893 ELOVL4Q9GZR5 314 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 IRF2BPLQ9H1B7 796 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 EBF3Q9H4W6 596 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 APOBEC3GQ9HC16 384 aaKnown RBP8.81□□□□□ -1
ERCC8-205ENST00000477893 KRT82Q9NSB4 513 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 RBM12Q9NTZ6 932 aaKnown RBP8.81□□□□□ -1
ERCC8-205ENST00000477893 TMEM30AQ9NV96 361 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 THG1LQ9NWX6 298 aaKnown RBP8.81□□□□□ -1
ERCC8-205ENST00000477893 SMPD4Q9NXE4 827 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 DLGAP2Q9P1A6 1054 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 HOOK1Q9UJC3 728 aaKnown RBP8.81□□□□□ -1
ERCC8-205ENST00000477893 MAN1B1Q9UKM7 699 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 CTNND2Q9UQB3 1225 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 MRPS17Q9Y2R5 130 aaKnown RBP8.81□□□□□ -1
ERCC8-205ENST00000477893 USP34Q70CQ2 3546 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 ATP8B3O60423 1300 aa8.8□□□□□ -1
ERCC8-205ENST00000477893 COL4A2P08572 1712 aa8.8□□□□□ -1
ERCC8-205ENST00000477893 LOC100996750A0A140TA64 210 aa8.8□□□□□ -1
ERCC8-205ENST00000477893 SHISA7A6NL88 538 aa8.8□□□□□ -1
ERCC8-205ENST00000477893 SPECC1L-ADORA2AF8WAN1 911 aa8.8□□□□□ -1
ERCC8-205ENST00000477893 MAN2B1O00754 1011 aa8.8□□□□□ -1
ERCC8-205ENST00000477893 LAMTOR5O43504 91 aa8.8□□□□□ -1
ERCC8-205ENST00000477893 ASS1P00966 412 aaKnown RBP8.8□□□□□ -1
ERCC8-205ENST00000477893 USP17L7P0C7H9 530 aa8.8□□□□□ -1
ERCC8-205ENST00000477893 DDX6P26196 483 aaKnown RBP eCLIP8.8□□□□□ -1
ERCC8-205ENST00000477893 MXI1P50539 228 aa8.8□□□□□ -1
ERCC8-205ENST00000477893 TAF10Q12962 218 aa8.8□□□□□ -1
ERCC8-205ENST00000477893 MTF1Q14872 753 aa8.8□□□□□ -1
ERCC8-205ENST00000477893 ZNF394Q53GI3 561 aa8.8□□□□□ -1
ERCC8-205ENST00000477893 ANKRD40Q6AI12 368 aa8.8□□□□□ -1
ERCC8-205ENST00000477893 TXNDC11Q6PKC3 985 aa8.8□□□□□ -1
ERCC8-205ENST00000477893 C1orf210Q8IVY1 113 aa8.8□□□□□ -1
ERCC8-205ENST00000477893 C12orf29Q8N999 325 aa8.8□□□□□ -1
ERCC8-205ENST00000477893 CCDC150Q8NCX0 1101 aa8.8□□□□□ -1
ERCC8-205ENST00000477893 TRMT2BQ96GJ1 504 aaKnown RBP8.8□□□□□ -1
ERCC8-205ENST00000477893 TNIP3Q96KP6 325 aa8.8□□□□□ -1
ERCC8-205ENST00000477893 GSDMAQ96QA5 445 aa8.8□□□□□ -1
ERCC8-205ENST00000477893 TWNKQ96RR1 684 aa8.8□□□□□ -1
ERCC8-205ENST00000477893 KCNK16Q96T55 309 aa8.8□□□□□ -1
ERCC8-205ENST00000477893 KRTAP4-6Q9BYQ5 205 aa8.8□□□□□ -1
ERCC8-205ENST00000477893 VRTNQ9H8Y1 702 aa8.8□□□□□ -1
ERCC8-205ENST00000477893 LMAN1LQ9HAT1 526 aa8.8□□□□□ -1
ERCC8-205ENST00000477893 NPDC1Q9NQX5 325 aaPredicted RBP8.8□□□□□ -1
ERCC8-205ENST00000477893 GKN1Q9NS71 199 aa8.8□□□□□ -1
ERCC8-205ENST00000477893 TDP1Q9NUW8 608 aa8.8□□□□□ -1
ERCC8-205ENST00000477893 TRPM5Q9NZQ8 1165 aa8.8□□□□□ -1
ERCC8-205ENST00000477893 WNT6Q9Y6F9 365 aa8.8□□□□□ -1
ERCC8-205ENST00000477893 NUP210Q8TEM1 1887 aaPredicted RBP8.8□□□□□ -1
ERCC8-205ENST00000477893 MIA3Q5JRA6 1907 aa8.8□□□□□ -1
ERCC8-205ENST00000477893 PSMA7O14818 248 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 IKBKBO14920 756 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 MAPK13O15264 365 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 NCAM2O15394 837 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 ADH1BP00325 375 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 SP9P0CG40 484 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 HDCP19113 662 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 CTHP32929 405 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 ANP32AP39687 249 aaKnown RBP8.79□□□□□ -1
ERCC8-205ENST00000477893 IFNAR2P48551 515 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 SLC5A3P53794 718 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 STX17P56962 302 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 MAP3K7CLP57077 242 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 PLCB2Q00722 1185 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 LRMPQ12912 555 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 MTAPQ13126 283 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 STIM1Q13586 685 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 CAMK4Q16566 473 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 NFIL3Q16649 462 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 EDRF1Q3B7T1 1238 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 ITPRIPL2Q3MIP1 535 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 NAIF1Q69YI7 327 aaPredicted RBP8.79□□□□□ -1
ERCC8-205ENST00000477893 KRT39Q6A163 491 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 Q6ZS52 159 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 ASCL5Q7RTU5 278 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 FUKQ8N0W3 1084 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 ADSSL1Q8N142 457 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 SCAMP5Q8TAC9 235 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 SH3RF2Q8TEC5 729 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 TMEM174Q8WUU8 243 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms