RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 PI4KAP42356 2102 aa10.48□□□□□ -0.73
COL4A5-204ENST00000477429 FBN3Q75N90 2809 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 PYCARD-AS1I3L0S3 204 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 J3QKU1 62 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 ITGB3P05106 788 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 CFIP05156 583 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 TCF3P15923 654 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 HDCP19113 662 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 PSMC1P62191 440 aaKnown RBP10.47□□□□□ -0.73
COL4A5-204ENST00000477429 AMPD2Q01433 879 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 SCAPQ12770 1279 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 SMARCB1Q12824 385 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 GNL2Q13823 731 aaKnown RBP10.47□□□□□ -0.73
COL4A5-204ENST00000477429 DHCR24Q15392 516 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 KYAT1Q16773 422 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 SOWAHAQ2M3V2 549 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 LMBRD2Q68DH5 695 aaPredicted RBP10.47□□□□□ -0.73
COL4A5-204ENST00000477429 ADALQ6DHV7 355 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 LPCAT2Q7L5N7 544 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 KBTBD7Q8WVZ9 684 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 SAAL1Q96ER3 474 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 P2RY11Q96G91 374 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 CRELD1Q96HD1 420 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 LRIG1Q96JA1 1093 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 TSPAN18Q96SJ8 248 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 ACBD6Q9BR61 282 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 LLPHQ9BRT6 129 aaKnown RBP10.47□□□□□ -0.73
COL4A5-204ENST00000477429 STRA6Q9BX79 667 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 RAB34Q9BZG1 259 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 SLC6A17Q9H1V8 727 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 ZHX3Q9H4I2 956 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 CD248Q9HCU0 757 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 SMPD4Q9NXE4 827 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 ZMYM5Q9UJ78 669 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 ODF2LQ9ULJ1 636 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 ACACAQ13085 2346 aa10.47□□□□□ -0.73
COL4A5-204ENST00000477429 PLXNB3Q9ULL4 1909 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 TCRBV21S2A2A0A5A6 115 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 GOLGA8IPA6NC78 632 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 GOLGA8JA6NMD2 632 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 UPK3BL1B0FP48 263 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 UPK3BL2E5RIL1 263 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 GABRDO14764 452 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 SH3BP5O60239 455 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 GJB3O75712 270 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 FAM13AO94988 1023 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 KAT7O95251 611 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 GABRG2P18507 467 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 PAX3P23760 479 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 WASP42768 502 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 PGFP49763 221 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 CASP5P51878 434 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 RPL10AP62906 217 aaKnown RBP10.46□□□□□ -0.73
COL4A5-204ENST00000477429 TFAMQ00059 246 aaKnown RBP10.46□□□□□ -0.73
COL4A5-204ENST00000477429 TSPY1Q01534 308 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 CAMK2BQ13554 666 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 SV2CQ496J9 727 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 LYSMD4Q5XG99 296 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 FAM171BQ6P995 826 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 USP49Q70CQ1 688 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 LIMS2Q7Z4I7 341 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 MDM1Q8TC05 714 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 HNRNPLLQ8WVV9 542 aaKnown RBP10.46□□□□□ -0.73
COL4A5-204ENST00000477429 MYLPFQ96A32 169 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 ZFRQ96KR1 1074 aaKnown RBP10.46□□□□□ -0.73
COL4A5-204ENST00000477429 ACOX2Q99424 681 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 FAM213AQ9BRX8 229 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 PARVGQ9HBI0 331 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 ABCB6Q9NP58 842 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 KCND2Q9NZV8 630 aa10.46□□□□□ -0.73
COL4A5-204ENST00000477429 HELZP42694 1942 aaKnown RBP10.46□□□□□ -0.74
COL4A5-204ENST00000477429 A0A0A0MRY4 1105 aa10.45□□□□□ -0.74
COL4A5-204ENST00000477429 A0A1W2PQF6 199 aa10.45□□□□□ -0.74
COL4A5-204ENST00000477429 ZNF840PA6NDX5 716 aa10.45□□□□□ -0.74
COL4A5-204ENST00000477429 LAD1O00515 517 aa10.45□□□□□ -0.74
COL4A5-204ENST00000477429 NFATC1O95644 943 aa10.45□□□□□ -0.74
COL4A5-204ENST00000477429 OLFM2O95897 454 aa10.45□□□□□ -0.74
COL4A5-204ENST00000477429 BDNFP23560 247 aa10.45□□□□□ -0.74
COL4A5-204ENST00000477429 MRPS21P82921 87 aaKnown RBP10.45□□□□□ -0.74
COL4A5-204ENST00000477429 LMAN2Q12907 356 aa10.45□□□□□ -0.74
COL4A5-204ENST00000477429 KCNB1Q14721 858 aa10.45□□□□□ -0.74
COL4A5-204ENST00000477429 NFE2Q16621 373 aaPredicted RBP10.45□□□□□ -0.74
COL4A5-204ENST00000477429 CFAP221Q4G0U5 840 aa10.45□□□□□ -0.74
COL4A5-204ENST00000477429 ZNF720Q7Z2F6 126 aa10.45□□□□□ -0.74
COL4A5-204ENST00000477429 SLCO6A1Q86UG4 719 aa10.45□□□□□ -0.74
COL4A5-204ENST00000477429 C11orf74Q86VG3 221 aa10.45□□□□□ -0.74
COL4A5-204ENST00000477429 SFR1Q86XK3 245 aa10.45□□□□□ -0.74
COL4A5-204ENST00000477429 MINDY1Q8N5J2 469 aa10.45□□□□□ -0.74
COL4A5-204ENST00000477429 NAT16Q8N8M0 369 aa10.45□□□□□ -0.74
COL4A5-204ENST00000477429 OR5B17Q8NGF7 314 aa10.45□□□□□ -0.74
COL4A5-204ENST00000477429 WHAMMQ8TF30 809 aa10.45□□□□□ -0.74
COL4A5-204ENST00000477429 RAD54LQ92698 747 aa10.45□□□□□ -0.74
COL4A5-204ENST00000477429 NUSAP1Q9BXS6 441 aaKnown RBP10.45□□□□□ -0.74
COL4A5-204ENST00000477429 PDE11AQ9HCR9 933 aa10.45□□□□□ -0.74
COL4A5-204ENST00000477429 TBC1D7Q9P0N9 293 aa10.45□□□□□ -0.74
COL4A5-204ENST00000477429 CFAP97Q9P2B7 532 aa10.45□□□□□ -0.74
COL4A5-204ENST00000477429 UXTQ9UBK9 157 aaPredicted RBP10.45□□□□□ -0.74
COL4A5-204ENST00000477429 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.45□□□□□ -0.74
COL4A5-204ENST00000477429 SNX9Q9Y5X1 595 aa10.45□□□□□ -0.74
COL4A5-204ENST00000477429 CPQQ9Y646 472 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms