RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 DCLK1O15075 740 aa3.29□□□□□ -1.88
XRN1-211ENST00000477237 PCDHGA12O60330 932 aa3.29□□□□□ -1.88
XRN1-211ENST00000477237 GCATO75600 419 aa3.29□□□□□ -1.88
XRN1-211ENST00000477237 AHSGP02765 367 aa3.29□□□□□ -1.88
XRN1-211ENST00000477237 MYBL2P10244 700 aa3.29□□□□□ -1.88
XRN1-211ENST00000477237 CTSAP10619 480 aa3.29□□□□□ -1.88
XRN1-211ENST00000477237 DSC2Q02487 901 aa3.29□□□□□ -1.88
XRN1-211ENST00000477237 CFHR1Q03591 330 aa3.29□□□□□ -1.88
XRN1-211ENST00000477237 E2F2Q14209 437 aa3.29□□□□□ -1.88
XRN1-211ENST00000477237 LONRF3Q496Y0 759 aa3.29□□□□□ -1.88
XRN1-211ENST00000477237 DEPDC1Q5TB30 811 aa3.29□□□□□ -1.88
XRN1-211ENST00000477237 MMP21Q8N119 569 aa3.29□□□□□ -1.88
XRN1-211ENST00000477237 PNISRQ8TF01 805 aaKnown RBP3.29□□□□□ -1.88
XRN1-211ENST00000477237 PTDSS2Q9BVG9 487 aa3.29□□□□□ -1.88
XRN1-211ENST00000477237 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.29□□□□□ -1.88
XRN1-211ENST00000477237 ABCF2Q9UG63 623 aa3.29□□□□□ -1.88
XRN1-211ENST00000477237 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.29□□□□□ -1.88
XRN1-211ENST00000477237 PCDHGA9Q9Y5G4 932 aaKnown RBP3.29□□□□□ -1.88
XRN1-211ENST00000477237 PCDHGA8Q9Y5G5 932 aa3.29□□□□□ -1.88
XRN1-211ENST00000477237 PCDHGA7Q9Y5G6 932 aa3.29□□□□□ -1.88
XRN1-211ENST00000477237 PCDHGA6Q9Y5G7 932 aa3.29□□□□□ -1.88
XRN1-211ENST00000477237 PCDHGA3Q9Y5H0 932 aa3.29□□□□□ -1.88
XRN1-211ENST00000477237 hCG_1984214I3L0E3 225 aa3.28□□□□□ -1.88
XRN1-211ENST00000477237 K7ESF4 209 aa3.28□□□□□ -1.88
XRN1-211ENST00000477237 FGF2P09038 288 aa3.28□□□□□ -1.88
XRN1-211ENST00000477237 LOXL3P58215 753 aa3.28□□□□□ -1.88
XRN1-211ENST00000477237 MTX1Q13505 466 aa3.28□□□□□ -1.88
XRN1-211ENST00000477237 IQCB1Q15051 598 aa3.28□□□□□ -1.88
XRN1-211ENST00000477237 ABCB5Q2M3G0 1257 aa3.28□□□□□ -1.88
XRN1-211ENST00000477237 BCDIN3DQ7Z5W3 292 aaKnown RBP3.28□□□□□ -1.88
XRN1-211ENST00000477237 FAM90A1Q86YD7 464 aa3.28□□□□□ -1.88
XRN1-211ENST00000477237 FAM177A1Q8N128 213 aaPredicted RBP3.28□□□□□ -1.88
XRN1-211ENST00000477237 ASB5Q8WWX0 329 aa3.28□□□□□ -1.88
XRN1-211ENST00000477237 CCDC17Q96LX7 622 aa3.28□□□□□ -1.88
XRN1-211ENST00000477237 TEKT5Q96M29 485 aa3.28□□□□□ -1.88
XRN1-211ENST00000477237 FYTTD1Q96QD9 318 aaKnown RBP3.28□□□□□ -1.88
XRN1-211ENST00000477237 PSMD1Q99460 953 aa3.28□□□□□ -1.88
XRN1-211ENST00000477237 FAM126AQ9BYI3 521 aaPredicted RBP3.28□□□□□ -1.88
XRN1-211ENST00000477237 SLC5A4Q9NY91 659 aa3.28□□□□□ -1.88
XRN1-211ENST00000477237 SELENONQ9NZV5 590 aa3.28□□□□□ -1.88
XRN1-211ENST00000477237 HESX1Q9UBX0 185 aa3.28□□□□□ -1.88
XRN1-211ENST00000477237 GABRQQ9UN88 632 aa3.28□□□□□ -1.88
XRN1-211ENST00000477237 POLHQ9Y253 713 aa3.28□□□□□ -1.88
XRN1-211ENST00000477237 MRPS17Q9Y2R5 130 aaKnown RBP3.28□□□□□ -1.88
XRN1-211ENST00000477237 PCDHA1Q9Y5I3 950 aa3.28□□□□□ -1.88
XRN1-211ENST00000477237 MRFAP1Q9Y605 127 aa3.28□□□□□ -1.88
XRN1-211ENST00000477237 A0A0U1RQG5 324 aaPredicted RBP3.27□□□□□ -1.89
XRN1-211ENST00000477237 CAMTA2O94983 1202 aa3.27□□□□□ -1.89
XRN1-211ENST00000477237 DLDP09622 509 aaKnown RBP3.27□□□□□ -1.89
XRN1-211ENST00000477237 ATXN1LP0C7T5 689 aaKnown RBP3.27□□□□□ -1.89
XRN1-211ENST00000477237 PIM1P11309 404 aaPredicted RBP3.27□□□□□ -1.89
XRN1-211ENST00000477237 EXOSC9Q06265 439 aaKnown RBP3.27□□□□□ -1.89
XRN1-211ENST00000477237 SEC23BQ15437 767 aa3.27□□□□□ -1.89
XRN1-211ENST00000477237 AMOTQ4VCS5 1084 aa3.27□□□□□ -1.89
XRN1-211ENST00000477237 AWAT1Q58HT5 328 aa3.27□□□□□ -1.89
XRN1-211ENST00000477237 MTHFD1LQ6UB35 978 aa3.27□□□□□ -1.89
XRN1-211ENST00000477237 DPY19L3Q6ZPD9 716 aa3.27□□□□□ -1.89
XRN1-211ENST00000477237 HEATR3Q7Z4Q2 680 aa3.27□□□□□ -1.89
XRN1-211ENST00000477237 PNMA8AQ86V59 439 aaPredicted RBP3.27□□□□□ -1.89
XRN1-211ENST00000477237 MPLKIPQ8TAP9 179 aa3.27□□□□□ -1.89
XRN1-211ENST00000477237 MRPL46Q9H2W6 279 aaKnown RBP3.27□□□□□ -1.89
XRN1-211ENST00000477237 PRDM16Q9HAZ2 1276 aa3.27□□□□□ -1.89
XRN1-211ENST00000477237 FEZ2Q9UHY8 353 aaPredicted RBP3.27□□□□□ -1.89
XRN1-211ENST00000477237 ZDHHC8Q9ULC8 765 aa3.27□□□□□ -1.89
XRN1-211ENST00000477237 NDRG4Q9ULP0 352 aaKnown RBP3.27□□□□□ -1.89
XRN1-211ENST00000477237 TBX22Q9Y458 520 aa3.27□□□□□ -1.89
XRN1-211ENST00000477237 PHLDB1Q86UU1 1377 aa3.26□□□□□ -1.89
XRN1-211ENST00000477237 BTBD19C9JJ37 291 aa3.26□□□□□ -1.89
XRN1-211ENST00000477237 ERC2O15083 957 aa3.26□□□□□ -1.89
XRN1-211ENST00000477237 LINC01565O15544 149 aa3.26□□□□□ -1.89
XRN1-211ENST00000477237 RNF8O76064 485 aa3.26□□□□□ -1.89
XRN1-211ENST00000477237 ARIH2O95376 493 aa3.26□□□□□ -1.89
XRN1-211ENST00000477237 VNN1O95497 513 aa3.26□□□□□ -1.89
XRN1-211ENST00000477237 CGAP01215 116 aa3.26□□□□□ -1.89
XRN1-211ENST00000477237 FTH1P19P0C7X4 201 aa3.26□□□□□ -1.89
XRN1-211ENST00000477237 NCLP19338 710 aaKnown RBP3.26□□□□□ -1.89
XRN1-211ENST00000477237 ADORA2AP29274 412 aa3.26□□□□□ -1.89
XRN1-211ENST00000477237 PPIFP30405 207 aaKnown RBP3.26□□□□□ -1.89
XRN1-211ENST00000477237 E2F1Q01094 437 aa3.26□□□□□ -1.89
XRN1-211ENST00000477237 PCBP2Q15366 365 aaKnown RBP eCLIP3.26□□□□□ -1.89
XRN1-211ENST00000477237 LY6KQ17RY6 165 aa3.26□□□□□ -1.89
XRN1-211ENST00000477237 TMTC4Q5T4D3 741 aa3.26□□□□□ -1.89
XRN1-211ENST00000477237 EFCAB2Q5VUJ9 269 aa3.26□□□□□ -1.89
XRN1-211ENST00000477237 PPP1R3BQ86XI6 285 aa3.26□□□□□ -1.89
XRN1-211ENST00000477237 CBARPQ8N350 705 aaPredicted RBP3.26□□□□□ -1.89
XRN1-211ENST00000477237 WDCPQ9H6R7 721 aa3.26□□□□□ -1.89
XRN1-211ENST00000477237 IGLV5-39A0A0G2JS06 123 aa3.25□□□□□ -1.89
XRN1-211ENST00000477237 UNC5CO95185 931 aa3.25□□□□□ -1.89
XRN1-211ENST00000477237 FGF3P11487 239 aaPredicted RBP3.25□□□□□ -1.89
XRN1-211ENST00000477237 RPS13P62277 151 aaKnown RBP3.25□□□□□ -1.89
XRN1-211ENST00000477237 SETQ01105 290 aaPredicted RBP3.25□□□□□ -1.89
XRN1-211ENST00000477237 NOGQ13253 232 aa3.25□□□□□ -1.89
XRN1-211ENST00000477237 CYP1B1Q16678 543 aa3.25□□□□□ -1.89
XRN1-211ENST00000477237 INAVAQ3KP66 663 aa3.25□□□□□ -1.89
XRN1-211ENST00000477237 CCDC157Q569K6 752 aa3.25□□□□□ -1.89
XRN1-211ENST00000477237 KRT26Q7Z3Y9 468 aa3.25□□□□□ -1.89
XRN1-211ENST00000477237 CAND1Q86VP6 1230 aaKnown RBP3.25□□□□□ -1.89
XRN1-211ENST00000477237 LIX1LQ8IVB5 337 aa3.25□□□□□ -1.89
XRN1-211ENST00000477237 PUS7LQ9H0K6 701 aaKnown RBP3.25□□□□□ -1.89
XRN1-211ENST00000477237 LMBRD1Q9NUN5 540 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms