RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 C2CD2Q9Y426 696 aa17.24■□□□□ 0.35
TMEM53-208ENST00000476724 RBP5P82980 135 aa17.23■□□□□ 0.35
TMEM53-208ENST00000476724 PRKCZQ05513 592 aa17.23■□□□□ 0.35
TMEM53-208ENST00000476724 NOGQ13253 232 aa17.23■□□□□ 0.35
TMEM53-208ENST00000476724 TMEM132DQ14C87 1099 aa17.23■□□□□ 0.35
TMEM53-208ENST00000476724 TMED2Q15363 201 aa17.23■□□□□ 0.35
TMEM53-208ENST00000476724 SLC10A6Q3KNW5 377 aa17.23■□□□□ 0.35
TMEM53-208ENST00000476724 ZBED8Q8IZ13 594 aa17.23■□□□□ 0.35
TMEM53-208ENST00000476724 HPDLQ96IR7 371 aa17.23■□□□□ 0.35
TMEM53-208ENST00000476724 TWNKQ96RR1 684 aa17.23■□□□□ 0.35
TMEM53-208ENST00000476724 FAM49AQ9H0Q0 323 aaPredicted RBP17.23■□□□□ 0.35
TMEM53-208ENST00000476724 VPS37BQ9H9H4 285 aa17.23■□□□□ 0.35
TMEM53-208ENST00000476724 RSAD1Q9HA92 442 aa17.23■□□□□ 0.35
TMEM53-208ENST00000476724 TJP2Q9UDY2 1190 aa17.23■□□□□ 0.35
TMEM53-208ENST00000476724 BARX2Q9UMQ3 279 aaPredicted RBP17.23■□□□□ 0.35
TMEM53-208ENST00000476724 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.23■□□□□ 0.35
TMEM53-208ENST00000476724 APOC4-APOC2K7ER74 178 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 M0QYV0 167 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 PRPF4O43172 522 aaKnown RBP eCLIP17.22■□□□□ 0.35
TMEM53-208ENST00000476724 TRUB2O95900 331 aaKnown RBP17.22■□□□□ 0.35
TMEM53-208ENST00000476724 APOC2P02655 101 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 GCAP28676 217 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 PHBP35232 272 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 ARL4CP56559 192 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 INCA1Q0VD86 236 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 PDIA2Q13087 525 aaKnown RBP17.22■□□□□ 0.35
TMEM53-208ENST00000476724 STILQ15468 1287 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 HIF1AQ16665 826 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 SPRED3Q2MJR0 410 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 SMTNL2Q2TAL5 461 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 CAPNS2Q96L46 248 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 HEXIM2Q96MH2 286 aaKnown RBP17.22■□□□□ 0.35
TMEM53-208ENST00000476724 TGS1Q96RS0 853 aaKnown RBP17.22■□□□□ 0.35
TMEM53-208ENST00000476724 ADPGKQ9BRR6 497 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 AP5M1Q9H0R1 490 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 FGFR1OP2Q9NVK5 253 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 SLC12A4Q9UP95 1085 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 SMG5Q9UPR3 1016 aaKnown RBP17.22■□□□□ 0.35
TMEM53-208ENST00000476724 RRN3P2A6NIE6 340 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 HAS3O00219 553 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 ALDH1A1P00352 501 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 AKR1A1P14550 325 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 ARF4P18085 180 aaPredicted RBP17.22■□□□□ 0.35
TMEM53-208ENST00000476724 MIPP30301 263 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 CTCFP49711 727 aaPredicted RBP17.22■□□□□ 0.35
TMEM53-208ENST00000476724 PSEN2P49810 448 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 CPT1AP50416 773 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 ZNF143P52747 638 aaPredicted RBP17.22■□□□□ 0.35
TMEM53-208ENST00000476724 ZNF200P98182 395 aaPredicted RBP17.22■□□□□ 0.35
TMEM53-208ENST00000476724 DEFB115Q30KQ5 88 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 KCNT1Q5JUK3 1230 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 ICE2Q659A1 982 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 EMC1Q8N766 993 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 ACAP3Q96P50 834 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 USP18Q9UMW8 372 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 AGAP1Q9UPQ3 857 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 ARL2BPQ9Y2Y0 163 aa17.22■□□□□ 0.35
TMEM53-208ENST00000476724 NRCAMQ92823 1304 aa17.21■□□□□ 0.35
TMEM53-208ENST00000476724 CYBAP13498 195 aa17.21■□□□□ 0.35
TMEM53-208ENST00000476724 TSHRP16473 764 aa17.21■□□□□ 0.35
TMEM53-208ENST00000476724 STIP1P31948 543 aaKnown RBP17.21■□□□□ 0.35
TMEM53-208ENST00000476724 DYNLT1P63172 113 aa17.21■□□□□ 0.35
TMEM53-208ENST00000476724 KIZQ2M2Z5 673 aa17.21■□□□□ 0.35
TMEM53-208ENST00000476724 LCLAT1Q6UWP7 414 aa17.21■□□□□ 0.35
TMEM53-208ENST00000476724 SPATA21Q7Z572 469 aa17.21■□□□□ 0.35
TMEM53-208ENST00000476724 RFX6Q8HWS3 928 aa17.21■□□□□ 0.35
TMEM53-208ENST00000476724 FUKQ8N0W3 1084 aa17.21■□□□□ 0.35
TMEM53-208ENST00000476724 NAT8LQ8N9F0 302 aa17.21■□□□□ 0.35
TMEM53-208ENST00000476724 GDAP1Q8TB36 358 aa17.21■□□□□ 0.35
TMEM53-208ENST00000476724 CNPY3Q9BT09 278 aa17.21■□□□□ 0.35
TMEM53-208ENST00000476724 CDHR5Q9HBB8 845 aa17.21■□□□□ 0.35
TMEM53-208ENST00000476724 Q9Y3F1 56 aa17.21■□□□□ 0.35
TMEM53-208ENST00000476724 POC1B-GALNT4F8VUJ3 575 aa17.2■□□□□ 0.34
TMEM53-208ENST00000476724 ENDOD1O94919 500 aa17.2■□□□□ 0.34
TMEM53-208ENST00000476724 FASTKD3Q14CZ7 662 aaKnown RBP17.2■□□□□ 0.34
TMEM53-208ENST00000476724 FSCN1Q16658 493 aaKnown RBP17.2■□□□□ 0.34
TMEM53-208ENST00000476724 ZC3H12AQ5D1E8 599 aaKnown RBP17.2■□□□□ 0.34
TMEM53-208ENST00000476724 ATP11CQ8NB49 1132 aa17.2■□□□□ 0.34
TMEM53-208ENST00000476724 PYROXD1Q8WU10 500 aa17.2■□□□□ 0.34
TMEM53-208ENST00000476724 CPT1BQ92523 772 aa17.2■□□□□ 0.34
TMEM53-208ENST00000476724 SMC6Q96SB8 1091 aa17.2■□□□□ 0.34
TMEM53-208ENST00000476724 MAK16Q9BXY0 300 aaKnown RBP17.2■□□□□ 0.34
TMEM53-208ENST00000476724 DPP3Q9NY33 737 aa17.2■□□□□ 0.34
TMEM53-208ENST00000476724 PSMC3IPQ9P2W1 217 aaPredicted RBP17.2■□□□□ 0.34
TMEM53-208ENST00000476724 HMGXB4Q9UGU5 601 aa17.2■□□□□ 0.34
TMEM53-208ENST00000476724 GINS2Q9Y248 185 aa17.2■□□□□ 0.34
TMEM53-208ENST00000476724 E7ESA3 106 aa17.2■□□□□ 0.34
TMEM53-208ENST00000476724 MCF2LO15068 1137 aa17.2■□□□□ 0.34
TMEM53-208ENST00000476724 ATP2C2O75185 946 aa17.2■□□□□ 0.34
TMEM53-208ENST00000476724 KRT15P19012 456 aa17.2■□□□□ 0.34
TMEM53-208ENST00000476724 GPD1P21695 349 aa17.2■□□□□ 0.34
TMEM53-208ENST00000476724 RPL22P35268 128 aaKnown RBP17.2■□□□□ 0.34
TMEM53-208ENST00000476724 GEMIN4P57678 1058 aaKnown RBP17.2■□□□□ 0.34
TMEM53-208ENST00000476724 ADAM17P78536 824 aa17.2■□□□□ 0.34
TMEM53-208ENST00000476724 TFDP2Q14188 446 aa17.2■□□□□ 0.34
TMEM53-208ENST00000476724 FAM47CQ5HY64 1035 aa17.2■□□□□ 0.34
TMEM53-208ENST00000476724 EFHC2Q5JST6 749 aa17.2■□□□□ 0.34
TMEM53-208ENST00000476724 FAM102AQ5T9C2 384 aaPredicted RBP17.2■□□□□ 0.34
TMEM53-208ENST00000476724 NT5C1AQ9BXI3 368 aa17.2■□□□□ 0.34
TMEM53-208ENST00000476724 TRABDQ9H4I3 376 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms