RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 ENGASEQ8NFI3 743 aa11.47□□□□□ -0.57
SEC13-214ENST00000476597 OVCA2Q8WZ82 227 aa11.47□□□□□ -0.57
SEC13-214ENST00000476597 CCDC34Q96HJ3 373 aa11.47□□□□□ -0.57
SEC13-214ENST00000476597 SLITRK1Q96PX8 696 aa11.47□□□□□ -0.57
SEC13-214ENST00000476597 COMMD8Q9NX08 183 aa11.47□□□□□ -0.57
SEC13-214ENST00000476597 WNT6Q9Y6F9 365 aa11.47□□□□□ -0.57
SEC13-214ENST00000476597 CACNA1AO00555 2505 aa11.47□□□□□ -0.57
SEC13-214ENST00000476597 CEP250Q9BV73 2442 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 ATP8B3O60423 1300 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 FAM92AA1XBS5 289 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 CHURC1-FNTBB4DL54 471 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 CLSTN1O94985 981 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 ABL1P00519 1130 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 OAS1P00973 400 aaKnown RBP11.46□□□□□ -0.57
SEC13-214ENST00000476597 TRIM49P0CI25 452 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 TRIM49CP0CI26 452 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 KRT13P13646 458 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 DRD1P21728 446 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 CNR2P34972 360 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 GCLMP48507 274 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 FNTBP49356 437 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 PPP3CAQ08209 521 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 DMWDQ09019 674 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 NR1H3Q13133 447 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 PNOCQ13519 176 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 EDRF1Q3B7T1 1238 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 SNX30Q5VWJ9 437 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 ACOT1Q86TX2 421 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 FAM35AQ86V20 835 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 LONP2Q86WA8 852 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 KIAA2013Q8IYS2 634 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 ADGRG2Q8IZP9 1017 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 FUKQ8N0W3 1084 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 TTC16Q8NEE8 873 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 ZMIZ2Q8NF64 920 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 SCAMP5Q8TAC9 235 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 TAS1R2Q8TE23 839 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 ATP2A3Q93084 1043 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 EXOC4Q96A65 974 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 SMOQ99835 787 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 P2RY13Q9BPV8 354 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 HINFPQ9BQA5 517 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 MED10Q9BTT4 135 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 CYP3A43Q9HB55 503 aa11.46□□□□□ -0.57
SEC13-214ENST00000476597 APOBEC3GQ9HC16 384 aaKnown RBP11.46□□□□□ -0.57
SEC13-214ENST00000476597 CHORDC1Q9UHD1 332 aaPredicted RBP11.46□□□□□ -0.57
SEC13-214ENST00000476597 SMG5Q9UPR3 1016 aaKnown RBP11.46□□□□□ -0.57
SEC13-214ENST00000476597 TCHHQ07283 1943 aa11.46□□□□□ -0.58
SEC13-214ENST00000476597 GOLGA6L4A6NEF3 574 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 HRO43593 1189 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 ATG13O75143 517 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 AP1G2O75843 785 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 EGFP01133 1207 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 ZDHHC11BP0C7U3 371 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 HOXC13P31276 330 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 GTF2H1P32780 548 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 PIK3CAP42336 1068 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 ID4P47928 161 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 SLC5A3P53794 718 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 INCA1Q0VD86 236 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 IFRD2Q12894 506 aaPredicted RBP11.45□□□□□ -0.58
SEC13-214ENST00000476597 FBXO43Q4G163 708 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 COBLL1Q53SF7 1204 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 NAIF1Q69YI7 327 aaPredicted RBP11.45□□□□□ -0.58
SEC13-214ENST00000476597 PKN3Q6P5Z2 889 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 SMYD4Q8IYR2 804 aaPredicted RBP11.45□□□□□ -0.58
SEC13-214ENST00000476597 C12orf29Q8N999 325 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 PDZD8Q8NEN9 1154 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 SPATA20Q8TB22 786 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 SLC2A14Q8TDB8 520 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 CD101Q93033 1021 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 FBXO32Q969P5 355 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 SMARCD1Q96GM5 515 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 GSDMAQ96QA5 445 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 TMEM8AQ9HCN3 771 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 CSNK1G1Q9HCP0 422 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 DMAP1Q9NPF5 467 aaPredicted RBP11.45□□□□□ -0.58
SEC13-214ENST00000476597 RMND1Q9NWS8 449 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 NCDNQ9UBB6 729 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 HMGXB4Q9UGU5 601 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 CPQQ9Y646 472 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 MIA3Q5JRA6 1907 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 TICRRQ7Z2Z1 1910 aa11.45□□□□□ -0.58
SEC13-214ENST00000476597 CETN3O15182 167 aa11.44□□□□□ -0.58
SEC13-214ENST00000476597 RNF40O75150 1001 aa11.44□□□□□ -0.58
SEC13-214ENST00000476597 BEST1O76090 585 aa11.44□□□□□ -0.58
SEC13-214ENST00000476597 NFATC1O95644 943 aa11.44□□□□□ -0.58
SEC13-214ENST00000476597 CCDC130P13994 396 aa11.44□□□□□ -0.58
SEC13-214ENST00000476597 TGM1P22735 817 aa11.44□□□□□ -0.58
SEC13-214ENST00000476597 PRCPP42785 496 aa11.44□□□□□ -0.58
SEC13-214ENST00000476597 ORC1Q13415 861 aa11.44□□□□□ -0.58
SEC13-214ENST00000476597 HECTD3Q5T447 861 aa11.44□□□□□ -0.58
SEC13-214ENST00000476597 ZNF658Q5TYW1 1059 aaPredicted RBP11.44□□□□□ -0.58
SEC13-214ENST00000476597 KRT39Q6A163 491 aa11.44□□□□□ -0.58
SEC13-214ENST00000476597 FILIP1Q7Z7B0 1213 aa11.44□□□□□ -0.58
SEC13-214ENST00000476597 WDR5BQ86VZ2 330 aa11.44□□□□□ -0.58
SEC13-214ENST00000476597 GPR161Q8N6U8 529 aaKnown RBP11.44□□□□□ -0.58
SEC13-214ENST00000476597 WHAMMQ8TF30 809 aa11.44□□□□□ -0.58
SEC13-214ENST00000476597 EZH1Q92800 747 aaPredicted RBP11.44□□□□□ -0.58
SEC13-214ENST00000476597 FAXDC2Q96IV6 333 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms