RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 MIER3Q7Z3K6 550 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 KCNK16Q96T55 309 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 NDEL1Q9GZM8 345 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 CPVLQ9H3G5 476 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 ARMC7Q9H6L4 198 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 UBE2TQ9NPD8 197 aaPredicted RBP14.39□□□□□ -0.11
HDAC1-206ENST00000476391 DKK3Q9UBP4 350 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 NOCTQ9UK39 431 aaKnown RBP14.39□□□□□ -0.11
HDAC1-206ENST00000476391 DNM3Q9UQ16 869 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 MTMR7Q9Y216 660 aa14.39□□□□□ -0.11
HDAC1-206ENST00000476391 TNS2Q63HR2 1409 aa14.38□□□□□ -0.11
HDAC1-206ENST00000476391 EIF3DO15371 548 aaKnown RBP eCLIP14.38□□□□□ -0.11
HDAC1-206ENST00000476391 TSPY3P0CV98 308 aa14.38□□□□□ -0.11
HDAC1-206ENST00000476391 TSPY8P0CW00 308 aa14.38□□□□□ -0.11
HDAC1-206ENST00000476391 NANOGP8Q6NSW7 305 aa14.38□□□□□ -0.11
HDAC1-206ENST00000476391 SH2D5Q6ZV89 423 aa14.38□□□□□ -0.11
HDAC1-206ENST00000476391 PIGSQ96S52 555 aa14.38□□□□□ -0.11
HDAC1-206ENST00000476391 CSRNP1Q96S65 589 aa14.38□□□□□ -0.11
HDAC1-206ENST00000476391 OLFM1Q99784 485 aa14.38□□□□□ -0.11
HDAC1-206ENST00000476391 HIPK3Q9H422 1215 aa14.38□□□□□ -0.11
HDAC1-206ENST00000476391 STN1Q9H668 368 aaKnown RBP14.38□□□□□ -0.11
HDAC1-206ENST00000476391 PSTPIP2Q9H939 334 aa14.38□□□□□ -0.11
HDAC1-206ENST00000476391 CNOT11Q9UKZ1 510 aaKnown RBP14.38□□□□□ -0.11
HDAC1-206ENST00000476391 NOX1Q9Y5S8 564 aa14.38□□□□□ -0.11
HDAC1-206ENST00000476391 SCINQ9Y6U3 715 aa14.38□□□□□ -0.11
HDAC1-206ENST00000476391 USP17L3A6NCW0 530 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 USP17L4A6NCW7 530 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 SORBS2O94875 1100 aaKnown RBP14.37□□□□□ -0.11
HDAC1-206ENST00000476391 FBXO21O94952 628 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 INHBBP09529 407 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 GYS1P13807 737 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 TKTP29401 623 aaKnown RBP14.37□□□□□ -0.11
HDAC1-206ENST00000476391 HOXD11P31277 338 aaPredicted RBP14.37□□□□□ -0.11
HDAC1-206ENST00000476391 TMPRSS15P98073 1019 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 ARL13BQ3SXY8 428 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 C6orf52Q5T4I8 152 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 RNASEH2BQ5TBB1 312 aaKnown RBP14.37□□□□□ -0.11
HDAC1-206ENST00000476391 DRICH1Q6PGQ1 229 aaPredicted RBP14.37□□□□□ -0.11
HDAC1-206ENST00000476391 C16orf87Q6PH81 154 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 NSMFQ6X4W1 530 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 USP17L1Q7RTZ2 530 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 HPS6Q86YV9 775 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 ZNF34Q8IZ26 560 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 SLC7A5P1Q8MH63 180 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 E2F7Q96AV8 911 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 THAP11Q96EK4 314 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 RUSC1Q9BVN2 902 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 HEMGNQ9BXL5 484 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 MKNK2Q9HBH9 465 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 OLFML3Q9NRN5 406 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 GID8Q9NWU2 228 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 ANAPC7Q9UJX3 599 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 SYNPO2Q9UMS6 1093 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 FRMD4BQ9Y2L6 1034 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 SNX9Q9Y5X1 595 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 SIN3BO75182 1162 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 STAMBPO95630 424 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 GLRA2P23416 452 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 SSTR1P30872 391 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 TNNI2P48788 182 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 ARSEP51690 589 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 GPS1Q13098 491 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 HIF1AQ16665 826 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 RGS21Q2M5E4 152 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 TCHHL1Q5QJ38 904 aaPredicted RBP14.37□□□□□ -0.11
HDAC1-206ENST00000476391 PEX5LQ8IYB4 626 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 PCYOX1LQ8NBM8 494 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 NLRP7Q8WX94 980 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 BHMTQ93088 406 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 ISOC1Q96CN7 298 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 OSBPL10Q9BXB5 764 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 NCKIPSDQ9NZQ3 722 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 RIMS3Q9UJD0 308 aa14.37□□□□□ -0.11
HDAC1-206ENST00000476391 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.36□□□□□ -0.11
HDAC1-206ENST00000476391 MED24O75448 989 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 BMP10O95393 424 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 TSHRP16473 764 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 GSSP48637 474 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 TRPC1P48995 793 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 ESRRGP62508 458 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 TXNL4AP83876 142 aaKnown RBP14.36□□□□□ -0.11
HDAC1-206ENST00000476391 KCNA1Q09470 495 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 CETN1Q12798 172 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 CYTH1Q15438 398 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 CHERPQ8IWX8 916 aaKnown RBP14.36□□□□□ -0.11
HDAC1-206ENST00000476391 HM13Q8TCT9 377 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 CMTM5Q96DZ9 223 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 MCM9Q9NXL9 1143 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 SIRPGQ9P1W8 387 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 B3GNT3Q9Y2A9 372 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 TIMM22Q9Y584 194 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 ZNF142P52746 1687 aaPredicted RBP14.36□□□□□ -0.11
HDAC1-206ENST00000476391 TMEM114B3SHH9 223 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 H0YJX3 145 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 PFDN6O15212 129 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 SGPL1O95470 568 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 TRIM49P0CI25 452 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 TRIM49CP0CI26 452 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 FMO1Q01740 532 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 PHKG1Q16816 387 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms