RNA–Protein interactions for RNA: ENST00000476241.2

HNRNPU-209, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,844 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-209ENST00000476241 TMEM88BA6NKF7 163 aa16.73■□□□□ 0.27
HNRNPU-209ENST00000476241 RNF225M0QZC1 329 aaPredicted RBP16.73■□□□□ 0.27
HNRNPU-209ENST00000476241 CBWD6Q4V339 395 aa16.73■□□□□ 0.27
HNRNPU-209ENST00000476241 SEZ6Q53EL9 994 aa16.73■□□□□ 0.27
HNRNPU-209ENST00000476241 CBWD3Q5JTY5 395 aa16.73■□□□□ 0.27
HNRNPU-209ENST00000476241 CBWD5Q5RIA9 395 aa16.73■□□□□ 0.27
HNRNPU-209ENST00000476241 STARD7Q9NQZ5 370 aa16.73■□□□□ 0.27
HNRNPU-209ENST00000476241 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.73■□□□□ 0.272e-8■■■□□ 17
HNRNPU-209ENST00000476241 IL1RAPL1Q9NZN1 696 aa16.73■□□□□ 0.27
HNRNPU-209ENST00000476241 PCYOX1Q9UHG3 505 aa16.73■□□□□ 0.27
HNRNPU-209ENST00000476241 CCDC78A2IDD5 438 aa16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 SUPT20HL2P0C7V6 817 aa16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 RAG1P15918 1043 aa16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 PECAM1P16284 738 aaPredicted RBP16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 CCT7Q99832 543 aa16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 PDCD2LQ9BRP1 358 aa16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 ATRNO75882 1429 aa16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 RIC1Q4ADV7 1423 aa16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 SEC24DO94855 1032 aaPredicted RBP16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 TMPRSS6Q8IU80 811 aa16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 WDR49Q8IV35 697 aa16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 ZNF606Q8WXB4 792 aa16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 HMX1Q9NP08 348 aaPredicted RBP16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 NUDT17P0C025 328 aa16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 NUDT2P50583 147 aa16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 ANGPTL8Q6UXH0 198 aa16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 NOP9Q86U38 636 aaKnown RBP16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 JADE3Q92613 823 aa16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 HAS1Q92839 578 aa16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 KCNMB3Q9NPA1 279 aa16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 USP18Q9UMW8 372 aa16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 TIMM44O43615 452 aa16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 ELF3P78545 371 aaPredicted RBP16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 NIPA1Q7RTP0 329 aa16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 LINC00523Q86TU6 105 aa16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 USP33Q8TEY7 942 aa16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 RMDN1Q96DB5 314 aa16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 SAR1AQ9NR31 198 aa16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 GID8Q9NWU2 228 aa16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.72■□□□□ 0.276e-10■■□□□ 13.8
HNRNPU-209ENST00000476241 BLOC1S6Q9UL45 172 aa16.72■□□□□ 0.27
HNRNPU-209ENST00000476241 EML1O00423 815 aa16.71■□□□□ 0.27
HNRNPU-209ENST00000476241 CYP3A4P08684 503 aa16.71■□□□□ 0.27
HNRNPU-209ENST00000476241 CPB1P15086 417 aa16.71■□□□□ 0.27
HNRNPU-209ENST00000476241 BGNP21810 368 aa16.71■□□□□ 0.27
HNRNPU-209ENST00000476241 SYTL5Q8TDW5 730 aaPredicted RBP16.71■□□□□ 0.27
HNRNPU-209ENST00000476241 CKAP2Q8WWK9 683 aa16.71■□□□□ 0.27
HNRNPU-209ENST00000476241 SNX19Q92543 992 aa16.71■□□□□ 0.27
HNRNPU-209ENST00000476241 TNFRSF25Q93038 417 aa16.71■□□□□ 0.27
HNRNPU-209ENST00000476241 SHCBP1LQ9BZQ2 653 aa16.71■□□□□ 0.27
HNRNPU-209ENST00000476241 EFCAB1Q9HAE3 211 aa16.71■□□□□ 0.27
HNRNPU-209ENST00000476241 H2AFYO75367 372 aaKnown RBP16.71■□□□□ 0.27
HNRNPU-209ENST00000476241 TCN1P20061 433 aaPredicted RBP16.71■□□□□ 0.27
HNRNPU-209ENST00000476241 PPATQ06203 517 aa16.71■□□□□ 0.27
HNRNPU-209ENST00000476241 KBTBD12Q3ZCT8 623 aa16.71■□□□□ 0.27
HNRNPU-209ENST00000476241 KDELC2Q7Z4H8 507 aa16.71■□□□□ 0.27
HNRNPU-209ENST00000476241 SMIM22K7EJ46 135 aa16.71■□□□□ 0.27
HNRNPU-209ENST00000476241 TLR2O60603 784 aa16.71■□□□□ 0.27
HNRNPU-209ENST00000476241 PGK2P07205 417 aa16.71■□□□□ 0.27
HNRNPU-209ENST00000476241 TGM2P21980 687 aa16.71■□□□□ 0.27
HNRNPU-209ENST00000476241 HADHAP40939 763 aa16.71■□□□□ 0.27
HNRNPU-209ENST00000476241 VEPH1Q14D04 833 aa16.71■□□□□ 0.27
HNRNPU-209ENST00000476241 GLB1LQ6UWU2 654 aa16.71■□□□□ 0.27
HNRNPU-209ENST00000476241 TRIM54Q9BYV2 358 aa16.71■□□□□ 0.27
HNRNPU-209ENST00000476241 LRCH1Q9Y2L9 728 aa16.71■□□□□ 0.27
HNRNPU-209ENST00000476241 ZNF711Q9Y462 761 aa16.71■□□□□ 0.27
HNRNPU-209ENST00000476241 VIL1P09327 827 aaKnown RBP16.71■□□□□ 0.26
HNRNPU-209ENST00000476241 MAP4P27816 1152 aaKnown RBP16.71■□□□□ 0.26
HNRNPU-209ENST00000476241 TCF7P36402 384 aaPredicted RBP16.71■□□□□ 0.26
HNRNPU-209ENST00000476241 GNL1P36915 607 aaPredicted RBP16.71■□□□□ 0.26
HNRNPU-209ENST00000476241 ALDH5A1P51649 535 aaPredicted RBP16.71■□□□□ 0.26
HNRNPU-209ENST00000476241 SV2CQ496J9 727 aa16.71■□□□□ 0.26
HNRNPU-209ENST00000476241 AASDHQ4L235 1098 aaPredicted RBP16.71■□□□□ 0.26
HNRNPU-209ENST00000476241 MPZL3Q6UWV2 235 aa16.71■□□□□ 0.26
HNRNPU-209ENST00000476241 C1orf186Q6ZWK4 172 aa16.71■□□□□ 0.26
HNRNPU-209ENST00000476241 IFNEQ86WN2 208 aa16.71■□□□□ 0.26
HNRNPU-209ENST00000476241 SLC7A14Q8TBB6 771 aa16.71■□□□□ 0.26
HNRNPU-209ENST00000476241 TCP10LQ8TDR4 215 aa16.71■□□□□ 0.26
HNRNPU-209ENST00000476241 EPS8L1Q8TE68 723 aa16.71■□□□□ 0.26
HNRNPU-209ENST00000476241 DDI1Q8WTU0 396 aa16.71■□□□□ 0.26
HNRNPU-209ENST00000476241 AFG1LQ8WV93 481 aa16.71■□□□□ 0.26
HNRNPU-209ENST00000476241 CYP3A43Q9HB55 503 aa16.71■□□□□ 0.26
HNRNPU-209ENST00000476241 DNAJC16Q9Y2G8 782 aa16.71■□□□□ 0.26
HNRNPU-209ENST00000476241 ACTL7BQ9Y614 415 aa16.71■□□□□ 0.26
HNRNPU-209ENST00000476241 VIRMAQ69YN4 1812 aaKnown RBP16.71■□□□□ 0.26
HNRNPU-209ENST00000476241 E2F8A0AVK6 867 aa16.7■□□□□ 0.26
HNRNPU-209ENST00000476241 BNIP3LO60238 219 aa16.7■□□□□ 0.26
HNRNPU-209ENST00000476241 MYL6P60660 151 aa16.7■□□□□ 0.26
HNRNPU-209ENST00000476241 PDAP1Q13442 181 aaKnown RBP16.7■□□□□ 0.26
HNRNPU-209ENST00000476241 CNGA2Q16280 664 aa16.7■□□□□ 0.26
HNRNPU-209ENST00000476241 CRELD2Q6UXH1 353 aaPredicted RBP16.7■□□□□ 0.26
HNRNPU-209ENST00000476241 ZCCHC9Q8N567 271 aaKnown RBP16.7■□□□□ 0.26
HNRNPU-209ENST00000476241 HACD3Q9P035 362 aa16.7■□□□□ 0.26
HNRNPU-209ENST00000476241 PPME1Q9Y570 386 aa16.7■□□□□ 0.26
HNRNPU-209ENST00000476241 PNPLA4P41247 253 aa16.7■□□□□ 0.26
HNRNPU-209ENST00000476241 CASP5P51878 434 aa16.7■□□□□ 0.26
HNRNPU-209ENST00000476241 SP3Q02447 781 aa16.7■□□□□ 0.26
HNRNPU-209ENST00000476241 AUHQ13825 339 aaKnown RBP16.7■□□□□ 0.26
HNRNPU-209ENST00000476241 RRP1BQ14684 758 aaKnown RBP16.7■□□□□ 0.26
HNRNPU-209ENST00000476241 ADRM1Q16186 407 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms