RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 SCAPQ12770 1279 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 SLC29A2Q14542 456 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 GRM7Q14831 915 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 CDC37Q16543 378 aaPredicted RBP4.68□□□□□ -1.66
VPS13D-207ENST00000476169 MAPKAPK3Q16644 382 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 CCDC92Q53HC0 331 aaPredicted RBP4.68□□□□□ -1.66
VPS13D-207ENST00000476169 TMTC4Q5T4D3 741 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 ZNF648Q5T619 568 aaPredicted RBP4.68□□□□□ -1.66
VPS13D-207ENST00000476169 NT5DC1Q5TFE4 455 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 FAM160B1Q5W0V3 765 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 ATG16L1Q676U5 607 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 GPRIN1Q7Z2K8 1008 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 CPLX4Q7Z7G2 160 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 SLC44A2Q8IWA5 706 aaPredicted RBP4.68□□□□□ -1.66
VPS13D-207ENST00000476169 TEX11Q8IYF3 940 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 CHCHD4Q8N4Q1 142 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 PDPRQ8NCN5 879 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 ZMIZ2Q8NF64 920 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 BHLHE22Q8NFJ8 381 aaPredicted RBP4.68□□□□□ -1.66
VPS13D-207ENST00000476169 OR6Y1Q8NGX8 325 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 SMCR8Q8TEV9 937 aaPredicted RBP4.68□□□□□ -1.66
VPS13D-207ENST00000476169 RAPGEF4Q8WZA2 1011 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 RADILQ96JH8 1075 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 PHACTR3Q96KR7 559 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 MPHOSPH8Q99549 860 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 SLF1Q9BQI6 1058 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 SPATA5L1Q9BVQ7 753 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 PDCL3Q9H2J4 239 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 ELAC1Q9H777 363 aaKnown RBP4.68□□□□□ -1.66
VPS13D-207ENST00000476169 CHODLQ9H9P2 273 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 NOD2Q9HC29 1040 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 USP40Q9NVE5 1235 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 TMEM160Q9NX00 188 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 LPAR3Q9UBY5 353 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 CFDP1Q9UEE9 299 aaPredicted RBP4.68□□□□□ -1.66
VPS13D-207ENST00000476169 ISY1Q9ULR0 285 aaKnown RBP4.68□□□□□ -1.66
VPS13D-207ENST00000476169 CNPY2Q9Y2B0 182 aa4.68□□□□□ -1.66
VPS13D-207ENST00000476169 E9PLN8 166 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 DKC1O60832 514 aaKnown RBP eCLIP4.67□□□□□ -1.66
VPS13D-207ENST00000476169 MFAP3LO75121 409 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 IPO13O94829 963 aaKnown RBP4.67□□□□□ -1.66
VPS13D-207ENST00000476169 A1BGP04217 495 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 PRKCBP05771 671 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 SRGAP2BP0DMP2 458 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 XRCC6P12956 609 aaKnown RBP eCLIP4.67□□□□□ -1.66
VPS13D-207ENST00000476169 MGAT1P26572 445 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 ACVR2AP27037 513 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 PTTG1IPP53801 180 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 PNLIPRP1P54315 467 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 ROR1Q01973 937 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 CALD1Q05682 793 aaKnown RBP4.67□□□□□ -1.66
VPS13D-207ENST00000476169 ANKRD1Q15327 319 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 ELAVL1Q15717 326 aaKnown RBP4.67□□□□□ -1.66
VPS13D-207ENST00000476169 CSRP2Q16527 193 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.67□□□□□ -1.66
VPS13D-207ENST00000476169 MAP3K21Q5TCX8 1036 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 MCTP1Q6DN14 999 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 SLC30A6Q6NXT4 461 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 USP17L6PQ6QN14 398 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 MED25Q71SY5 747 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 R3HCC1LQ7Z5L2 792 aaKnown RBP4.67□□□□□ -1.66
VPS13D-207ENST00000476169 TAX1BP1Q86VP1 789 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 ZSCAN30Q86W11 494 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 CCDC28AQ8IWP9 274 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 ELOA2Q8IYF1 753 aaPredicted RBP4.67□□□□□ -1.66
VPS13D-207ENST00000476169 CCDC191Q8NCU4 936 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 DNERQ8NFT8 737 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 OR52N2Q8NGI0 321 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 OR1N1Q8NGS0 311 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 ST8SIA2Q92186 375 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 MOGAT1Q96PD6 335 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 OR14A2Q96R54 314 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 TWNKQ96RR1 684 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 PPP1R9BQ96SB3 815 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 BAG1Q99933 345 aaPredicted RBP4.67□□□□□ -1.66
VPS13D-207ENST00000476169 VKORC1Q9BQB6 163 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 CPEB1Q9BZB8 566 aaKnown RBP4.67□□□□□ -1.66
VPS13D-207ENST00000476169 ZCCHC17Q9NP64 241 aaKnown RBP4.67□□□□□ -1.66
VPS13D-207ENST00000476169 PRDM8Q9NQV8 689 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 EIF2B3Q9NR50 452 aaKnown RBP4.67□□□□□ -1.66
VPS13D-207ENST00000476169 HESX1Q9UBX0 185 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 CDYLQ9Y232 598 aa4.67□□□□□ -1.66
VPS13D-207ENST00000476169 A0A087WZ62 844 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 LOC102723971A0A1B0GUV8 181 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 DRGXA6NNA5 263 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 E7EVH7 732 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 POLRMTO00411 1230 aaKnown RBP4.66□□□□□ -1.66
VPS13D-207ENST00000476169 VPS4BO75351 444 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 INHBBP09529 407 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 CYP2C9P11712 490 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 CKBP12277 381 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 TPH1P17752 444 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 ATICP31939 592 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 ARL3P36405 182 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 ZEB1P37275 1124 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-207ENST00000476169 VIPR2P41587 438 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 CHN2P52757 468 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 EPHB4P54760 987 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 WNT3P56703 355 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 SNX16P57768 344 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms