RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 ATICP31939 592 aa16.61■□□□□ 0.25
CPSF3-203ENST00000475482 GPR15P49685 360 aa16.61■□□□□ 0.25
CPSF3-203ENST00000475482 AP3M2P53677 418 aa16.61■□□□□ 0.25
CPSF3-203ENST00000475482 ZBED6P86452 979 aa16.61■□□□□ 0.25
CPSF3-203ENST00000475482 GPR158Q5T848 1215 aa16.61■□□□□ 0.25
CPSF3-203ENST00000475482 CACNA2D4Q7Z3S7 1137 aa16.61■□□□□ 0.25
CPSF3-203ENST00000475482 FMNL3Q8IVF7 1028 aa16.61■□□□□ 0.25
CPSF3-203ENST00000475482 CPLX3Q8WVH0 158 aa16.61■□□□□ 0.25
CPSF3-203ENST00000475482 TRMT2BQ96GJ1 504 aaKnown RBP16.61■□□□□ 0.25
CPSF3-203ENST00000475482 SLC46A2Q9BY10 475 aa16.61■□□□□ 0.25
CPSF3-203ENST00000475482 SLITRK6Q9H5Y7 841 aa16.61■□□□□ 0.25
CPSF3-203ENST00000475482 CRTAC1Q9NQ79 661 aa16.61■□□□□ 0.25
CPSF3-203ENST00000475482 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.61■□□□□ 0.25
CPSF3-203ENST00000475482 LRRIQ3A6PVS8 624 aaPredicted RBP16.6■□□□□ 0.25
CPSF3-203ENST00000475482 CHADO15335 359 aa16.6■□□□□ 0.25
CPSF3-203ENST00000475482 RFX1P22670 979 aa16.6■□□□□ 0.25
CPSF3-203ENST00000475482 KRT9P35527 623 aa16.6■□□□□ 0.25
CPSF3-203ENST00000475482 MYL6P60660 151 aa16.6■□□□□ 0.25
CPSF3-203ENST00000475482 RPL10AP62906 217 aaKnown RBP16.6■□□□□ 0.25
CPSF3-203ENST00000475482 DDR2Q16832 855 aa16.6■□□□□ 0.25
CPSF3-203ENST00000475482 ARHGAP15Q53QZ3 475 aa16.6■□□□□ 0.25
CPSF3-203ENST00000475482 TDRD10Q5VZ19 366 aaKnown RBP16.6■□□□□ 0.25
CPSF3-203ENST00000475482 KRT39Q6A163 491 aa16.6■□□□□ 0.25
CPSF3-203ENST00000475482 TPRG1Q6ZUI0 275 aa16.6■□□□□ 0.25
CPSF3-203ENST00000475482 OR8K1Q8NGG5 319 aa16.6■□□□□ 0.25
CPSF3-203ENST00000475482 CEP295NLQ96MC4 621 aa16.6■□□□□ 0.25
CPSF3-203ENST00000475482 SYT15Q9BQS2 421 aa16.6■□□□□ 0.25
CPSF3-203ENST00000475482 MRPL45Q9BRJ2 306 aaKnown RBP16.6■□□□□ 0.25
CPSF3-203ENST00000475482 LSM14BQ9BX40 385 aaKnown RBP16.6■□□□□ 0.25
CPSF3-203ENST00000475482 TMEM8AQ9HCN3 771 aa16.6■□□□□ 0.25
CPSF3-203ENST00000475482 FAM207AQ9NSI2 230 aaPredicted RBP16.6■□□□□ 0.25
CPSF3-203ENST00000475482 GCNT4Q9P109 453 aa16.6■□□□□ 0.25
CPSF3-203ENST00000475482 FAM170BA6NMN3 283 aa16.59■□□□□ 0.25
CPSF3-203ENST00000475482 ZNF263O14978 683 aa16.59■□□□□ 0.25
CPSF3-203ENST00000475482 TADA3O75528 432 aa16.59■□□□□ 0.25
CPSF3-203ENST00000475482 TRIM49P0CI25 452 aa16.59■□□□□ 0.25
CPSF3-203ENST00000475482 TRIM49CP0CI26 452 aa16.59■□□□□ 0.25
CPSF3-203ENST00000475482 SKILP12757 684 aa16.59■□□□□ 0.25
CPSF3-203ENST00000475482 CD72P21854 359 aa16.59■□□□□ 0.25
CPSF3-203ENST00000475482 DDX6P26196 483 aaKnown RBP eCLIP16.59■□□□□ 0.25
CPSF3-203ENST00000475482 TARSP26639 723 aaKnown RBP16.59■□□□□ 0.25
CPSF3-203ENST00000475482 MAGEA9P43362 315 aa16.59■□□□□ 0.25
CPSF3-203ENST00000475482 RPS9P46781 194 aaKnown RBP16.59■□□□□ 0.25
CPSF3-203ENST00000475482 MXI1P50539 228 aa16.59■□□□□ 0.25
CPSF3-203ENST00000475482 ADKP55263 362 aaKnown RBP16.59■□□□□ 0.25
CPSF3-203ENST00000475482 CYP4F8P98187 520 aa16.59■□□□□ 0.25
CPSF3-203ENST00000475482 MAPRE1Q15691 268 aaKnown RBP16.59■□□□□ 0.25
CPSF3-203ENST00000475482 WDR72Q3MJ13 1102 aa16.59■□□□□ 0.25
CPSF3-203ENST00000475482 C1orf220Q5T0J3 134 aa16.59■□□□□ 0.25
CPSF3-203ENST00000475482 SDHAF4Q5VUM1 108 aa16.59■□□□□ 0.25
CPSF3-203ENST00000475482 VSTM1Q6UX27 236 aa16.59■□□□□ 0.25
CPSF3-203ENST00000475482 ZNF852Q6ZMS4 543 aa16.59■□□□□ 0.25
CPSF3-203ENST00000475482 C4orf50Q6ZRC1 276 aa16.59■□□□□ 0.25
CPSF3-203ENST00000475482 C1orf210Q8IVY1 113 aa16.59■□□□□ 0.25
CPSF3-203ENST00000475482 MAML2Q8IZL2 1156 aaPredicted RBP16.59■□□□□ 0.25
CPSF3-203ENST00000475482 CMTM8Q8IZV2 173 aa16.59■□□□□ 0.25
CPSF3-203ENST00000475482 TC2NQ8N9U0 490 aa16.59■□□□□ 0.25
CPSF3-203ENST00000475482 MYCBPAPQ8TBZ2 947 aa16.59■□□□□ 0.25
CPSF3-203ENST00000475482 BAG1Q99933 345 aaPredicted RBP16.59■□□□□ 0.25
CPSF3-203ENST00000475482 TTYH3Q9C0H2 523 aa16.59■□□□□ 0.25
CPSF3-203ENST00000475482 ABHD10Q9NUJ1 306 aa16.59■□□□□ 0.25
CPSF3-203ENST00000475482 SLC38A8A6NNN8 435 aa16.58■□□□□ 0.24
CPSF3-203ENST00000475482 MAN2B1O00754 1011 aa16.58■□□□□ 0.24
CPSF3-203ENST00000475482 VNN1O95497 513 aa16.58■□□□□ 0.24
CPSF3-203ENST00000475482 PRAMEF12O95522 483 aa16.58■□□□□ 0.24
CPSF3-203ENST00000475482 PON1P27169 355 aa16.58■□□□□ 0.24
CPSF3-203ENST00000475482 GNL1P36915 607 aaPredicted RBP16.58■□□□□ 0.24
CPSF3-203ENST00000475482 PSMC1P62191 440 aaKnown RBP16.58■□□□□ 0.24
CPSF3-203ENST00000475482 DLG4P78352 724 aa16.58■□□□□ 0.24
CPSF3-203ENST00000475482 KCNMA1Q12791 1236 aa16.58■□□□□ 0.24
CPSF3-203ENST00000475482 TRPC3Q13507 836 aa16.58■□□□□ 0.24
CPSF3-203ENST00000475482 UBXN2BQ14CS0 331 aa16.58■□□□□ 0.24
CPSF3-203ENST00000475482 TAF12Q16514 161 aa16.58■□□□□ 0.24
CPSF3-203ENST00000475482 ZACNQ401N2 412 aa16.58■□□□□ 0.24
CPSF3-203ENST00000475482 SPATA2LQ8IUW3 424 aaPredicted RBP16.58■□□□□ 0.24
CPSF3-203ENST00000475482 STKLD1Q8NE28 680 aa16.58■□□□□ 0.24
CPSF3-203ENST00000475482 MYLPFQ96A32 169 aa16.58■□□□□ 0.24
CPSF3-203ENST00000475482 PCED1BQ96HM7 432 aa16.58■□□□□ 0.24
CPSF3-203ENST00000475482 SPATA17Q96L03 361 aa16.58■□□□□ 0.24
CPSF3-203ENST00000475482 FAM81BQ96LP2 452 aa16.58■□□□□ 0.24
CPSF3-203ENST00000475482 ZNF830Q96NB3 372 aaPredicted RBP16.58■□□□□ 0.24
CPSF3-203ENST00000475482 GCNAQ96QF7 691 aa16.58■□□□□ 0.24
CPSF3-203ENST00000475482 MMS19Q96T76 1030 aa16.58■□□□□ 0.24
CPSF3-203ENST00000475482 CRACR2AQ9BSW2 395 aa16.58■□□□□ 0.24
CPSF3-203ENST00000475482 UXTQ9UBK9 157 aaPredicted RBP16.58■□□□□ 0.24
CPSF3-203ENST00000475482 MYO6Q9UM54 1294 aa16.58■□□□□ 0.24
CPSF3-203ENST00000475482 MRPS17Q9Y2R5 130 aaKnown RBP16.58■□□□□ 0.24
CPSF3-203ENST00000475482 GVINP1Q7Z2Y8 2422 aa16.57■□□□□ 0.24
CPSF3-203ENST00000475482 ARHGAP6O43182 974 aa16.57■□□□□ 0.24
CPSF3-203ENST00000475482 PDGFRBP09619 1106 aa16.57■□□□□ 0.24
CPSF3-203ENST00000475482 GCLMP48507 274 aa16.57■□□□□ 0.24
CPSF3-203ENST00000475482 ARID5BQ14865 1188 aa16.57■□□□□ 0.24
CPSF3-203ENST00000475482 ARHGAP29Q52LW3 1261 aa16.57■□□□□ 0.24
CPSF3-203ENST00000475482 MAMSTRQ6ZN01 415 aa16.57■□□□□ 0.24
CPSF3-203ENST00000475482 MON1AQ86VX9 555 aa16.57■□□□□ 0.24
CPSF3-203ENST00000475482 TMTC1Q8IUR5 882 aa16.57■□□□□ 0.24
CPSF3-203ENST00000475482 CELF5Q8N6W0 485 aaKnown RBP16.57■□□□□ 0.24
CPSF3-203ENST00000475482 EHBP1Q8NDI1 1231 aa16.57■□□□□ 0.24
CPSF3-203ENST00000475482 MSANTD3Q96H12 275 aa16.57■□□□□ 0.24
CPSF3-203ENST00000475482 DNAJC7Q99615 494 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms