RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 TMEM176AQ96HP8 235 aa16.95■□□□□ 0.3
ITGB1-210ENST00000474568 HNRNPABQ99729 332 aaKnown RBP16.95■□□□□ 0.3
ITGB1-210ENST00000474568 PRRX2Q99811 253 aa16.95■□□□□ 0.3
ITGB1-210ENST00000474568 SMPD4Q9NXE4 827 aa16.95■□□□□ 0.3
ITGB1-210ENST00000474568 GMIPQ9P107 970 aa16.95■□□□□ 0.3
ITGB1-210ENST00000474568 ARIH1Q9Y4X5 557 aaPredicted RBP16.95■□□□□ 0.3
ITGB1-210ENST00000474568 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.95■□□□□ 0.35e-6■■■■■ 39.1
ITGB1-210ENST00000474568 MUC6Q6W4X9 2439 aa16.95■□□□□ 0.3
ITGB1-210ENST00000474568 SCAMP3O14828 347 aaKnown RBP16.94■□□□□ 0.3
ITGB1-210ENST00000474568 CCDC192P0DO97 292 aa16.94■□□□□ 0.3
ITGB1-210ENST00000474568 ARSAP15289 507 aa16.94■□□□□ 0.3
ITGB1-210ENST00000474568 RAD23BP54727 409 aa16.94■□□□□ 0.3
ITGB1-210ENST00000474568 MTF1Q14872 753 aa16.94■□□□□ 0.3
ITGB1-210ENST00000474568 TPD52L1Q16890 204 aaPredicted RBP16.94■□□□□ 0.3
ITGB1-210ENST00000474568 DPCR1Q3MIW9 517 aa16.94■□□□□ 0.3
ITGB1-210ENST00000474568 CC2D1AQ6P1N0 951 aaPredicted RBP16.94■□□□□ 0.3
ITGB1-210ENST00000474568 CLEC20AQ6ZU45 233 aa16.94■□□□□ 0.3
ITGB1-210ENST00000474568 MLKLQ8NB16 471 aa16.94■□□□□ 0.3
ITGB1-210ENST00000474568 GPT2Q8TD30 523 aa16.94■□□□□ 0.3
ITGB1-210ENST00000474568 FAM3CQ92520 227 aa16.94■□□□□ 0.3
ITGB1-210ENST00000474568 ATOH1Q92858 354 aaPredicted RBP16.94■□□□□ 0.3
ITGB1-210ENST00000474568 KAT5Q92993 513 aa16.94■□□□□ 0.3
ITGB1-210ENST00000474568 CNOT6LQ96LI5 555 aaKnown RBP16.94■□□□□ 0.3
ITGB1-210ENST00000474568 NT5C1BQ96P26 610 aa16.94■□□□□ 0.3
ITGB1-210ENST00000474568 PHOX2BQ99453 314 aa16.94■□□□□ 0.3
ITGB1-210ENST00000474568 DNAI2Q9GZS0 605 aa16.94■□□□□ 0.3
ITGB1-210ENST00000474568 RNF38Q9H0F5 515 aa16.94■□□□□ 0.3
ITGB1-210ENST00000474568 EBF3Q9H4W6 596 aa16.94■□□□□ 0.3
ITGB1-210ENST00000474568 KIF9Q9HAQ2 790 aa16.94■□□□□ 0.3
ITGB1-210ENST00000474568 TRPV5Q9NQA5 729 aa16.94■□□□□ 0.3
ITGB1-210ENST00000474568 DLGAP2Q9P1A6 1054 aa16.94■□□□□ 0.3
ITGB1-210ENST00000474568 WNT6Q9Y6F9 365 aa16.94■□□□□ 0.3
ITGB1-210ENST00000474568 SOBPA7XYQ1 873 aa16.93■□□□□ 0.3
ITGB1-210ENST00000474568 MAN2B1O00754 1011 aa16.93■□□□□ 0.3
ITGB1-210ENST00000474568 FGFR1OPO95684 399 aaKnown RBP16.93■□□□□ 0.3
ITGB1-210ENST00000474568 AFPP02771 609 aaKnown RBP16.93■□□□□ 0.3
ITGB1-210ENST00000474568 CD19P15391 556 aa16.93■□□□□ 0.3
ITGB1-210ENST00000474568 PLCB2Q00722 1185 aa16.93■□□□□ 0.3
ITGB1-210ENST00000474568 ZNF268Q14587 947 aaPredicted RBP16.93■□□□□ 0.3
ITGB1-210ENST00000474568 ZNF77Q15935 545 aa16.93■□□□□ 0.3
ITGB1-210ENST00000474568 RRAGAQ7L523 313 aa16.93■□□□□ 0.3
ITGB1-210ENST00000474568 ARHGEF19Q8IW93 802 aa16.93■□□□□ 0.3
ITGB1-210ENST00000474568 PPM1KQ8N3J5 372 aa16.93■□□□□ 0.3
ITGB1-210ENST00000474568 CSNK1G1Q9HCP0 422 aa16.93■□□□□ 0.3
ITGB1-210ENST00000474568 HPS4Q9NQG7 708 aa16.93■□□□□ 0.3
ITGB1-210ENST00000474568 MRPS17Q9Y2R5 130 aaKnown RBP16.93■□□□□ 0.3
ITGB1-210ENST00000474568 CPQQ9Y646 472 aa16.93■□□□□ 0.3
ITGB1-210ENST00000474568 WDFY4Q6ZS81 3184 aa16.93■□□□□ 0.3
ITGB1-210ENST00000474568 PTPRDP23468 1912 aa16.92■□□□□ 0.3
ITGB1-210ENST00000474568 SPECC1L-ADORA2AF8WAN1 911 aa16.92■□□□□ 0.3
ITGB1-210ENST00000474568 GOLGA6L22H0YM25 854 aa16.92■□□□□ 0.3
ITGB1-210ENST00000474568 LEFTY2O00292 366 aa16.92■□□□□ 0.3
ITGB1-210ENST00000474568 MBL2P11226 248 aaPredicted RBP16.92■□□□□ 0.3
ITGB1-210ENST00000474568 ACO1P21399 889 aaKnown RBP16.92■□□□□ 0.3
ITGB1-210ENST00000474568 PPP3CCP48454 512 aa16.92■□□□□ 0.3
ITGB1-210ENST00000474568 PGFP49763 221 aa16.92■□□□□ 0.3
ITGB1-210ENST00000474568 NUBP1P53384 320 aa16.92■□□□□ 0.3
ITGB1-210ENST00000474568 MARSP56192 900 aaKnown RBP16.92■□□□□ 0.3
ITGB1-210ENST00000474568 ZXDBP98169 803 aa16.92■□□□□ 0.3
ITGB1-210ENST00000474568 CETN1Q12798 172 aa16.92■□□□□ 0.3
ITGB1-210ENST00000474568 USP4Q13107 963 aa16.92■□□□□ 0.3
ITGB1-210ENST00000474568 ANGPT1Q15389 498 aa16.92■□□□□ 0.3
ITGB1-210ENST00000474568 GOLGA7BQ2TAP0 167 aa16.92■□□□□ 0.3
ITGB1-210ENST00000474568 ITPRIPL2Q3MIP1 535 aa16.92■□□□□ 0.3
ITGB1-210ENST00000474568 HSP90AA4PQ58FG1 418 aa16.92■□□□□ 0.3
ITGB1-210ENST00000474568 TXNDC11Q6PKC3 985 aa16.92■□□□□ 0.3
ITGB1-210ENST00000474568 TTC39CQ8N584 583 aa16.92■□□□□ 0.3
ITGB1-210ENST00000474568 PDZD8Q8NEN9 1154 aa16.92■□□□□ 0.3
ITGB1-210ENST00000474568 FAXDC2Q96IV6 333 aa16.92■□□□□ 0.3
ITGB1-210ENST00000474568 FAM83CQ9BQN1 747 aa16.92■□□□□ 0.3
ITGB1-210ENST00000474568 INTS2Q9H0H0 1204 aaKnown RBP16.92■□□□□ 0.3
ITGB1-210ENST00000474568 DUS2Q9NX74 493 aaKnown RBP16.92■□□□□ 0.3
ITGB1-210ENST00000474568 ARHGAP26Q9UNA1 814 aa16.92■□□□□ 0.3
ITGB1-210ENST00000474568 PCDHB4Q9Y5E5 795 aa16.92■□□□□ 0.3
ITGB1-210ENST00000474568 HHLA1C9JL84 531 aa16.91■□□□□ 0.3
ITGB1-210ENST00000474568 CYP26A1O43174 497 aa16.91■□□□□ 0.3
ITGB1-210ENST00000474568 OAS1P00973 400 aaKnown RBP16.91■□□□□ 0.3
ITGB1-210ENST00000474568 CALCAP01258 141 aa16.91■□□□□ 0.3
ITGB1-210ENST00000474568 TBXAS1P24557 533 aaPredicted RBP16.91■□□□□ 0.3
ITGB1-210ENST00000474568 CTHP32929 405 aa16.91■□□□□ 0.3
ITGB1-210ENST00000474568 MTIF2P46199 727 aaKnown RBP16.91■□□□□ 0.3
ITGB1-210ENST00000474568 IFNAR2P48551 515 aa16.91■□□□□ 0.3
ITGB1-210ENST00000474568 PDE6CP51160 858 aa16.91■□□□□ 0.3
ITGB1-210ENST00000474568 YWHAEP62258 255 aaKnown RBP16.91■□□□□ 0.3
ITGB1-210ENST00000474568 RUNX3Q13761 415 aa16.91■□□□□ 0.3
ITGB1-210ENST00000474568 TMEM270Q6UE05 265 aa16.91■□□□□ 0.3
ITGB1-210ENST00000474568 EHBP1Q8NDI1 1231 aa16.91■□□□□ 0.3
ITGB1-210ENST00000474568 LMO3Q8TAP4 145 aa16.91■□□□□ 0.3
ITGB1-210ENST00000474568 CRACR2AQ9BSW2 395 aa16.91■□□□□ 0.3
ITGB1-210ENST00000474568 DUSP16Q9BY84 665 aa16.91■□□□□ 0.3
ITGB1-210ENST00000474568 C8orf33Q9H7E9 229 aaPredicted RBP16.91■□□□□ 0.3
ITGB1-210ENST00000474568 CCSER2Q9H7U1 834 aa16.91■□□□□ 0.3
ITGB1-210ENST00000474568 RBM12Q9NTZ6 932 aaKnown RBP16.91■□□□□ 0.3
ITGB1-210ENST00000474568 SPATA6Q9NWH7 488 aaPredicted RBP16.91■□□□□ 0.3
ITGB1-210ENST00000474568 IL37Q9NZH6 218 aa16.91■□□□□ 0.3
ITGB1-210ENST00000474568 OTOL1A6NHN0 477 aaPredicted RBP16.9■□□□□ 0.3
ITGB1-210ENST00000474568 PMM2O15305 246 aa16.9■□□□□ 0.3
ITGB1-210ENST00000474568 P4HA2O15460 535 aa16.9■□□□□ 0.3
ITGB1-210ENST00000474568 COCHO43405 550 aa16.9■□□□□ 0.3
ITGB1-210ENST00000474568 PON2Q15165 354 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms