RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 TMEM120AQ9BXJ8 343 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 KLHL4Q9C0H6 718 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 PRDM16Q9HAZ2 1276 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 LRRC4CQ9HCJ2 640 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 CYP26B1Q9NR63 512 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 TBCCD1Q9NVR7 557 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 C6orf203Q9P0P8 240 aaPredicted RBP8.38□□□□□ -1.07
CCDC93-208ENST00000474546 GGT7Q9UJ14 662 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 ZMYND8Q9ULU4 1186 aaPredicted RBP8.38□□□□□ -1.07
CCDC93-208ENST00000474546 TRIM33Q9UPN9 1127 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 APOBEC2Q9Y235 224 aaKnown RBP8.38□□□□□ -1.07
CCDC93-208ENST00000474546 SNCAIPQ9Y6H5 919 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 TCF20Q9UGU0 1960 aaKnown RBP8.38□□□□□ -1.07
CCDC93-208ENST00000474546 SETXQ7Z333 2677 aaKnown RBP8.38□□□□□ -1.07
CCDC93-208ENST00000474546 ANKRD11Q6UB99 2663 aaPredicted RBP8.37□□□□□ -1.07
CCDC93-208ENST00000474546 SSC5DA1L4H1 1573 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 A0A0G2JND7 137 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 EME2A4GXA9 379 aaPredicted RBP8.37□□□□□ -1.07
CCDC93-208ENST00000474546 MANSC4A6NHS7 340 aaPredicted RBP8.37□□□□□ -1.07
CCDC93-208ENST00000474546 PRR33A8MZF0 331 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 H3BNX3 289 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 FCHO1O14526 889 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 COPEO14579 308 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 CCNT2O60583 730 aaKnown RBP8.37□□□□□ -1.07
CCDC93-208ENST00000474546 TBX10O75333 385 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 TNFAIP8O95379 198 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 SNRPAP09012 282 aaKnown RBP8.37□□□□□ -1.07
CCDC93-208ENST00000474546 DLDP09622 509 aaKnown RBP8.37□□□□□ -1.07
CCDC93-208ENST00000474546 KRT5P13647 590 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 UQCRBP14927 111 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 GM2AP17900 193 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 GRK2P25098 689 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 ADSLP30566 484 aaPredicted RBP8.37□□□□□ -1.07
CCDC93-208ENST00000474546 HOXA10P31260 410 aaPredicted RBP8.37□□□□□ -1.07
CCDC93-208ENST00000474546 RPL5P46777 297 aaKnown RBP8.37□□□□□ -1.07
CCDC93-208ENST00000474546 PSMD7P51665 324 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 PRMT2P55345 433 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 CLDN10P78369 228 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 ZNF200P98182 395 aaPredicted RBP8.37□□□□□ -1.07
CCDC93-208ENST00000474546 KRT76Q01546 638 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 MAP3K10Q02779 954 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 PPP3CAQ08209 521 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 THOC5Q13769 683 aaKnown RBP8.37□□□□□ -1.07
CCDC93-208ENST00000474546 SPIDRQ14159 915 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 SURF1Q15526 300 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 ZC2HC1CQ53FD0 456 aaPredicted RBP8.37□□□□□ -1.07
CCDC93-208ENST00000474546 FAM47CQ5HY64 1035 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 EFHC1Q5JVL4 640 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 RARS2Q5T160 578 aaKnown RBP8.37□□□□□ -1.07
CCDC93-208ENST00000474546 C1orf146Q5VVC0 180 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 TATDN1Q6P1N9 297 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 B3GNT9Q6UX72 402 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 C3orf67Q6ZVT6 689 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 CYS1Q717R9 158 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 KCTD1Q719H9 257 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 PODNQ7Z5L7 613 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 DHDDSQ86SQ9 333 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 SLC47A2Q86VL8 602 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 SPATA24Q86W54 205 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 SLC26A11Q86WA9 606 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 PALB2Q86YC2 1186 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 CCNJLQ8IV13 435 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 DHX37Q8IY37 1157 aaKnown RBP8.37□□□□□ -1.07
CCDC93-208ENST00000474546 RNF168Q8IYW5 571 aaPredicted RBP8.37□□□□□ -1.07
CCDC93-208ENST00000474546 ABRAQ8N0Z2 381 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 CYP4X1Q8N118 509 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 GPD1LQ8N335 351 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 CCDC33Q8N5R6 958 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 TERB1Q8NA31 727 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 PROCA1Q8NCQ7 364 aaPredicted RBP8.37□□□□□ -1.07
CCDC93-208ENST00000474546 ICA1LQ8NDH6 482 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 OR6Y1Q8NGX8 325 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 RSAD2Q8WXG1 361 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 DLG3Q92796 817 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 LRGUKQ96M69 825 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 PAFAH2Q99487 392 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 NTPCRQ9BSD7 190 aaKnown RBP8.37□□□□□ -1.07
CCDC93-208ENST00000474546 IDI2Q9BXS1 227 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 MRPS26Q9BYN8 205 aaKnown RBP8.37□□□□□ -1.07
CCDC93-208ENST00000474546 C11orf16Q9NQ32 467 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 THAP1Q9NVV9 213 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 TAS2R1Q9NYW7 299 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 RABGEF1Q9UJ41 708 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 MID2Q9UJV3 735 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 ITGA11Q9UKX5 1188 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 CNTN6Q9UQ52 1028 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 TBC1D30Q9Y2I9 924 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 FARP1Q9Y4F1 1045 aaPredicted RBP8.37□□□□□ -1.07
CCDC93-208ENST00000474546 SQORQ9Y6N5 450 aa8.37□□□□□ -1.07
CCDC93-208ENST00000474546 CHD6Q8TD26 2715 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 TCRBV7S2A1N4TA0A589 114 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 SPDYE5A6NIY4 337 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 B2RBV5 119 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 SGK1O00141 431 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 CASQ2O14958 399 aaPredicted RBP8.36□□□□□ -1.07
CCDC93-208ENST00000474546 CHADO15335 359 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 TLR3O15455 904 aaKnown RBP8.36□□□□□ -1.07
CCDC93-208ENST00000474546 MAFGO15525 162 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 ENTPD3O75355 529 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 GNRH1P01148 92 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms