RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 NCANO14594 1321 aa8.79□□□□□ -1
CNN3-205ENST00000474409 ANKRD62A6NC57 917 aa8.78□□□□□ -1
CNN3-205ENST00000474409 GOLGA8SH3BPF8 625 aa8.78□□□□□ -1
CNN3-205ENST00000474409 RFXAPO00287 272 aa8.78□□□□□ -1
CNN3-205ENST00000474409 CLASP2O75122 1294 aaKnown RBP8.78□□□□□ -1
CNN3-205ENST00000474409 VNN2O95498 520 aa8.78□□□□□ -1
CNN3-205ENST00000474409 LRG1P02750 347 aa8.78□□□□□ -1
CNN3-205ENST00000474409 ERBB2P04626 1255 aa8.78□□□□□ -1
CNN3-205ENST00000474409 C8AP07357 584 aa8.78□□□□□ -1
CNN3-205ENST00000474409 TMEM253P0C7T8 217 aa8.78□□□□□ -1
CNN3-205ENST00000474409 SPATA31D3P0C874 917 aa8.78□□□□□ -1
CNN3-205ENST00000474409 MMP8P22894 467 aa8.78□□□□□ -1
CNN3-205ENST00000474409 ALDH1A3P47895 512 aa8.78□□□□□ -1
CNN3-205ENST00000474409 TUFMP49411 452 aaKnown RBP8.78□□□□□ -1
CNN3-205ENST00000474409 CLCN4P51793 760 aa8.78□□□□□ -1
CNN3-205ENST00000474409 SLC5A3P53794 718 aa8.78□□□□□ -1
CNN3-205ENST00000474409 GALCP54803 685 aa8.78□□□□□ -1
CNN3-205ENST00000474409 TWF1Q12792 350 aa8.78□□□□□ -1
CNN3-205ENST00000474409 KIF5AQ12840 1032 aa8.78□□□□□ -1
CNN3-205ENST00000474409 CAMK1Q14012 370 aa8.78□□□□□ -1
CNN3-205ENST00000474409 TAF12Q16514 161 aa8.78□□□□□ -1
CNN3-205ENST00000474409 DDR2Q16832 855 aa8.78□□□□□ -1
CNN3-205ENST00000474409 FAM102AQ5T9C2 384 aaPredicted RBP8.78□□□□□ -1
CNN3-205ENST00000474409 OR6B2Q6IFH4 312 aa8.78□□□□□ -1
CNN3-205ENST00000474409 DNAJC24Q6P3W2 148 aa8.78□□□□□ -1
CNN3-205ENST00000474409 SPATA31D4Q6ZUB0 917 aa8.78□□□□□ -1
CNN3-205ENST00000474409 CCDC149Q6ZUS6 474 aa8.78□□□□□ -1
CNN3-205ENST00000474409 FAM183BPQ6ZVS7 135 aa8.78□□□□□ -1
CNN3-205ENST00000474409 GPRIN1Q7Z2K8 1008 aa8.78□□□□□ -1
CNN3-205ENST00000474409 ADGRD2Q7Z7M1 963 aa8.78□□□□□ -1
CNN3-205ENST00000474409 RBM23Q86U06 439 aaKnown RBP8.78□□□□□ -1
CNN3-205ENST00000474409 MCOLN2Q8IZK6 566 aa8.78□□□□□ -1
CNN3-205ENST00000474409 WDTC1Q8N5D0 677 aa8.78□□□□□ -1
CNN3-205ENST00000474409 STKLD1Q8NE28 680 aa8.78□□□□□ -1
CNN3-205ENST00000474409 ZMIZ2Q8NF64 920 aa8.78□□□□□ -1
CNN3-205ENST00000474409 SLC7A14Q8TBB6 771 aa8.78□□□□□ -1
CNN3-205ENST00000474409 STK32AQ8WU08 396 aa8.78□□□□□ -1
CNN3-205ENST00000474409 SLC35F5Q8WV83 523 aa8.78□□□□□ -1
CNN3-205ENST00000474409 KCTD13Q8WZ19 329 aa8.78□□□□□ -1
CNN3-205ENST00000474409 C18orf8Q96DM3 657 aa8.78□□□□□ -1
CNN3-205ENST00000474409 SELENOOQ9BVL4 669 aa8.78□□□□□ -1
CNN3-205ENST00000474409 TSGA10Q9BZW7 698 aa8.78□□□□□ -1
CNN3-205ENST00000474409 THAP2Q9H0W7 228 aa8.78□□□□□ -1
CNN3-205ENST00000474409 PRDM12Q9H4Q4 367 aa8.78□□□□□ -1
CNN3-205ENST00000474409 NSUN3Q9H649 340 aaKnown RBP8.78□□□□□ -1
CNN3-205ENST00000474409 CYLDQ9NQC7 956 aa8.78□□□□□ -1
CNN3-205ENST00000474409 MAN1C1Q9NR34 630 aa8.78□□□□□ -1
CNN3-205ENST00000474409 WDR35Q9P2L0 1181 aa8.78□□□□□ -1
CNN3-205ENST00000474409 HSFX1Q9UBD0 423 aa8.78□□□□□ -1
CNN3-205ENST00000474409 TJP2Q9UDY2 1190 aa8.78□□□□□ -1
CNN3-205ENST00000474409 INTUQ9ULD6 942 aa8.78□□□□□ -1
CNN3-205ENST00000474409 MAFFQ9ULX9 164 aa8.78□□□□□ -1
CNN3-205ENST00000474409 ZKSCAN5Q9Y2L8 839 aa8.78□□□□□ -1
CNN3-205ENST00000474409 REXO2Q9Y3B8 237 aaKnown RBP8.78□□□□□ -1
CNN3-205ENST00000474409 INSL5Q9Y5Q6 135 aa8.78□□□□□ -1
CNN3-205ENST00000474409 SCINQ9Y6U3 715 aa8.78□□□□□ -1
CNN3-205ENST00000474409 TRANK1O15050 2925 aa8.77□□□□□ -1
CNN3-205ENST00000474409 HHLA1C9JL84 531 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 PER2O15055 1255 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 SART1O43290 800 aaKnown RBP8.77□□□□□ -1.01
CNN3-205ENST00000474409 KRT86O43790 486 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 FBXO21O94952 628 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 RTN3O95197 1032 aaPredicted RBP8.77□□□□□ -1.01
CNN3-205ENST00000474409 SEC24AO95486 1093 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 SRGAP2BP0DMP2 458 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 ATF6P18850 670 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 RRM1P23921 792 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 MSNP26038 577 aaKnown RBP8.77□□□□□ -1.01
CNN3-205ENST00000474409 GABRB2P47870 512 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 NRIP1P48552 1158 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 TKTL1P51854 596 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 EPHB3P54753 998 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 NAP1L1P55209 391 aaKnown RBP8.77□□□□□ -1.01
CNN3-205ENST00000474409 GPC5P78333 572 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 RAB41Q5JT25 222 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 PPM1LQ5SGD2 360 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 LLGL2Q6P1M3 1020 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 DENND5BQ6ZUT9 1274 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 PHLDB2Q86SQ0 1253 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 ITIH5Q86UX2 942 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 XYLT1Q86Y38 959 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 ZDHHC17Q8IUH5 632 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 RHOT2Q8IXI1 618 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 TCEAL8Q8IYN2 117 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 NUP93Q8N1F7 819 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 ELMOD1Q8N336 334 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 KREMEN2Q8NCW0 462 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 C3orf20Q8ND61 904 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 GPR152Q8TDT2 470 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 GIPC2Q8TF65 315 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 RFFLQ8WZ73 363 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 GOLGA1Q92805 767 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 VCPIP1Q96JH7 1222 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 SPATA17Q96L03 361 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 CEP295NLQ96MC4 621 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 CDCA3Q99618 268 aaPredicted RBP8.77□□□□□ -1.01
CNN3-205ENST00000474409 SLC4A5Q9BY07 1137 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 ULBP1Q9BZM6 244 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 UBXN6Q9BZV1 441 aa8.77□□□□□ -1.01
CNN3-205ENST00000474409 FBXO44Q9H4M3 255 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms