RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 RMDN1Q96DB5 314 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 SLC47A1Q96FL8 570 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 SUCLG2Q96I99 432 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 C7orf26Q96N11 449 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 EIF2AQ9BY44 585 aaKnown RBP6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 SAP130Q9H0E3 1048 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 RNF208Q9H0X6 261 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 IFT22Q9H7X7 185 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 CERS4Q9HA82 394 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 POLE3Q9NRF9 147 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 KRT84Q9NSB2 600 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 ZBTB40Q9NUA8 1239 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 COQ3Q9NZJ6 369 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 POLKQ9UBT6 870 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 PCOLCE2Q9UKZ9 415 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 ARHGAP26Q9UNA1 814 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 POLHQ9Y253 713 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 ASB3Q9Y575 518 aa6.4□□□□□ -1.39
SMARCE1-208ENST00000474246 RAB3GAP2Q9H2M9 1393 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 MYPNQ86TC9 1320 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 PRR23AA6NEV1 266 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 OR5K4A6NMS3 321 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 IRAK2O43187 625 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 AP1G1O43747 822 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 FGF18O76093 207 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 IFNB1P01574 187 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 RAG1P15918 1043 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 ADSSP30520 456 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 ACADSBP45954 432 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 CPT1AP50416 773 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 STARD6P59095 220 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 PRKCZQ05513 592 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 NIPAL4Q0D2K0 466 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 FOXC1Q12948 553 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 LLGL1Q15334 1064 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 MTFR1Q15390 333 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 ADIPOQQ15848 244 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 TMEM266Q2M3C6 531 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 MDH1BQ5I0G3 518 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 OLFML2BQ68BL8 750 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 CENPPQ6IPU0 288 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 PRPF40BQ6NWY9 871 aaKnown RBP6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 PTCHD4Q6ZW05 846 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 SLFN11Q7Z7L1 901 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 FAM20CQ8IXL6 584 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 TSEN2Q8NCE0 465 aaKnown RBP6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 GRK7Q8WTQ7 553 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 SEPT1Q8WYJ6 367 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 RFFLQ8WZ73 363 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 NSUN4Q96CB9 384 aaKnown RBP6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 C7orf34Q96L11 122 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 RNF38Q9H0F5 515 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 DPH5Q9H2P9 285 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 ATAD3AQ9NVI7 634 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 KIF17Q9P2E2 1029 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 HESX1Q9UBX0 185 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 EXOC6BQ9Y2D4 811 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 STK38LQ9Y2H1 464 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 PCDHGA1Q9Y5H4 931 aa6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 ROCK2O75116 1388 aaKnown RBP6.39□□□□□ -1.39
SMARCE1-208ENST00000474246 DAPK3O43293 454 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 MAN1A2O60476 641 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 SYNCRIPO60506 623 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 PPM1BO75688 479 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 PRKD3O94806 890 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 DLGAP3O95886 979 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 LRG1P02750 347 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 TFRCP02786 760 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 QDPRP09417 244 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 DLDP09622 509 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 PYGMP11217 842 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 RARGP13631 454 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 L1CAMP32004 1257 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 TTKP33981 857 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 GPC1P35052 558 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 PRIM2P49643 509 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 STAT5BP51692 787 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 KCNQ1P51787 676 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 OXCT1P55809 520 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 VBP1P61758 197 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 UBE2IP63279 158 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 NKX3-2P78367 333 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 OTUD4Q01804 1114 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 KDSRQ06136 332 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 CAMK2DQ13557 499 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 SEMA5AQ13591 1074 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 HABP2Q14520 560 aaPredicted RBP6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 RAB3GAP1Q15042 981 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 TRADDQ15628 312 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 CNGA2Q16280 664 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 INAVAQ3KP66 663 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 TOR1AIP1Q5JTV8 583 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 STXBP5Q5T5C0 1151 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 ATL3Q6DD88 541 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 C16orf46Q6P387 395 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 DHX32Q7L7V1 743 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 R3HCC1LQ7Z5L2 792 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 FAM83AQ86UY5 434 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 PTRH1Q86Y79 214 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 SIAH1Q8IUQ4 282 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms