RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 CHRM1P11229 460 aaPredicted RBP21.59■■□□□ 1.05
APP-215ENST00000474136 SLC6A11P48066 632 aa21.59■■□□□ 1.05
APP-215ENST00000474136 EMC10Q5UCC4 262 aa21.59■■□□□ 1.05
APP-215ENST00000474136 USP49Q70CQ1 688 aa21.59■■□□□ 1.05
APP-215ENST00000474136 SYT12Q8IV01 421 aa21.59■■□□□ 1.05
APP-215ENST00000474136 CEP57L1Q8IYX8 460 aa21.59■■□□□ 1.05
APP-215ENST00000474136 TXNDC5Q8NBS9 432 aaKnown RBP21.59■■□□□ 1.05
APP-215ENST00000474136 ZDHHC4Q9NPG8 344 aa21.59■■□□□ 1.05
APP-215ENST00000474136 STK17AQ9UEE5 414 aa21.59■■□□□ 1.05
APP-215ENST00000474136 AGAP1Q9UPQ3 857 aa21.59■■□□□ 1.05
APP-215ENST00000474136 LEFTY2O00292 366 aa21.58■■□□□ 1.05
APP-215ENST00000474136 SCAMP3O14828 347 aaKnown RBP21.58■■□□□ 1.05
APP-215ENST00000474136 ALDH1A2O94788 518 aa21.58■■□□□ 1.05
APP-215ENST00000474136 LETM1O95202 739 aaPredicted RBP21.58■■□□□ 1.05
APP-215ENST00000474136 KLF8O95600 359 aaPredicted RBP21.58■■□□□ 1.05
APP-215ENST00000474136 CYP17A1P05093 508 aa21.58■■□□□ 1.05
APP-215ENST00000474136 ITGB3P05106 788 aa21.58■■□□□ 1.05
APP-215ENST00000474136 KRT18P05783 430 aaKnown RBP21.58■■□□□ 1.05
APP-215ENST00000474136 TCF3P15923 654 aa21.58■■□□□ 1.05
APP-215ENST00000474136 ADSSP30520 456 aa21.58■■□□□ 1.05
APP-215ENST00000474136 TIE1P35590 1138 aa21.58■■□□□ 1.05
APP-215ENST00000474136 PNPLA4P41247 253 aa21.58■■□□□ 1.05
APP-215ENST00000474136 STAT6P42226 847 aa21.58■■□□□ 1.05
APP-215ENST00000474136 FAM193AP78312 1265 aa21.58■■□□□ 1.05
APP-215ENST00000474136 MRPS21P82921 87 aaKnown RBP21.58■■□□□ 1.05
APP-215ENST00000474136 TFAMQ00059 246 aaKnown RBP21.58■■□□□ 1.05
APP-215ENST00000474136 SEMA3BQ13214 749 aa21.58■■□□□ 1.05
APP-215ENST00000474136 SLFN12LQ6IEE8 588 aa21.58■■□□□ 1.05
APP-215ENST00000474136 SPATA2LQ8IUW3 424 aaPredicted RBP21.58■■□□□ 1.05
APP-215ENST00000474136 C1orf127Q8N9H9 656 aa21.58■■□□□ 1.05
APP-215ENST00000474136 IL17RCQ8NAC3 791 aa21.58■■□□□ 1.05
APP-215ENST00000474136 ZSWIM2Q8NEG5 633 aa21.58■■□□□ 1.05
APP-215ENST00000474136 HUS1O60921 280 aa21.57■■□□□ 1.04
APP-215ENST00000474136 TBCAO75347 108 aaKnown RBP21.57■■□□□ 1.04
APP-215ENST00000474136 SLFN14P0C7P3 912 aa21.57■■□□□ 1.04
APP-215ENST00000474136 ITPKAP23677 461 aa21.57■■□□□ 1.04
APP-215ENST00000474136 MYL7Q01449 175 aa21.57■■□□□ 1.04
APP-215ENST00000474136 MAP7D1Q3KQU3 841 aa21.57■■□□□ 1.04
APP-215ENST00000474136 FILIP1Q7Z7B0 1213 aa21.57■■□□□ 1.04
APP-215ENST00000474136 CHCHD4Q8N4Q1 142 aa21.57■■□□□ 1.04
APP-215ENST00000474136 PDILTQ8N807 584 aa21.57■■□□□ 1.04
APP-215ENST00000474136 WHAMMQ8TF30 809 aa21.57■■□□□ 1.04
APP-215ENST00000474136 POMGNT1Q8WZA1 660 aa21.57■■□□□ 1.04
APP-215ENST00000474136 SPACA7Q96KW9 195 aa21.57■■□□□ 1.04
APP-215ENST00000474136 LRRC27Q9C0I9 530 aa21.57■■□□□ 1.04
APP-215ENST00000474136 FREM2Q5SZK8 3169 aa21.57■■□□□ 1.04
APP-215ENST00000474136 PTPRDP23468 1912 aa21.57■■□□□ 1.04
APP-215ENST00000474136 ATP2C2O75185 946 aa21.56■■□□□ 1.04
APP-215ENST00000474136 IL18RAPO95256 599 aa21.56■■□□□ 1.04
APP-215ENST00000474136 CFIP05156 583 aa21.56■■□□□ 1.04
APP-215ENST00000474136 PLCG1P19174 1290 aa21.56■■□□□ 1.04
APP-215ENST00000474136 CFAP221Q4G0U5 840 aa21.56■■□□□ 1.04
APP-215ENST00000474136 CCDC183Q5T5S1 534 aa21.56■■□□□ 1.04
APP-215ENST00000474136 LYSMD4Q5XG99 296 aa21.56■■□□□ 1.04
APP-215ENST00000474136 SLC23A3Q6PIS1 610 aa21.56■■□□□ 1.04
APP-215ENST00000474136 KRBA2Q6ZNG9 492 aa21.56■■□□□ 1.04
APP-215ENST00000474136 C12orf40Q86WS4 652 aa21.56■■□□□ 1.04
APP-215ENST00000474136 HMGB4Q8WW32 186 aa21.56■■□□□ 1.04
APP-215ENST00000474136 GTPBP2Q9BX10 602 aaKnown RBP21.56■■□□□ 1.04
APP-215ENST00000474136 NUP62CLQ9H1M0 184 aa21.56■■□□□ 1.04
APP-215ENST00000474136 BCCIPQ9P287 314 aaKnown RBP eCLIP21.56■■□□□ 1.04
APP-215ENST00000474136 PILRBQ9UKJ0 227 aa21.56■■□□□ 1.04
APP-215ENST00000474136 NBEAQ8NFP9 2946 aa21.56■■□□□ 1.04
APP-215ENST00000474136 USP46P62068 366 aa21.55■■□□□ 1.04
APP-215ENST00000474136 AMPD3Q01432 767 aa21.55■■□□□ 1.04
APP-215ENST00000474136 POU5F1Q01860 360 aaKnown RBP21.55■■□□□ 1.04
APP-215ENST00000474136 DHCR24Q15392 516 aa21.55■■□□□ 1.04
APP-215ENST00000474136 NT5DC4Q86YG4 428 aa21.55■■□□□ 1.04
APP-215ENST00000474136 ADGRF2Q8IZF7 708 aa21.55■■□□□ 1.04
APP-215ENST00000474136 ADGRG2Q8IZP9 1017 aa21.55■■□□□ 1.04
APP-215ENST00000474136 TMEM86AQ8N2M4 240 aa21.55■■□□□ 1.04
APP-215ENST00000474136 DEFB119Q8N690 84 aa21.55■■□□□ 1.04
APP-215ENST00000474136 CXorf38Q8TB03 319 aa21.55■■□□□ 1.04
APP-215ENST00000474136 RAD54LQ92698 747 aa21.55■■□□□ 1.04
APP-215ENST00000474136 DHX58Q96C10 678 aa21.55■■□□□ 1.04
APP-215ENST00000474136 FAM213AQ9BRX8 229 aa21.55■■□□□ 1.04
APP-215ENST00000474136 PANK2Q9BZ23 570 aa21.55■■□□□ 1.04
APP-215ENST00000474136 SNX9Q9Y5X1 595 aa21.55■■□□□ 1.04
APP-215ENST00000474136 ANAPC1Q9H1A4 1944 aa21.55■■□□□ 1.04
APP-215ENST00000474136 MYMKA6NI61 221 aa21.55■■□□□ 1.04
APP-215ENST00000474136 ADAM23O75077 832 aa21.55■■□□□ 1.04
APP-215ENST00000474136 MYL1P05976 194 aa21.55■■□□□ 1.04
APP-215ENST00000474136 E2F4Q16254 413 aa21.55■■□□□ 1.04
APP-215ENST00000474136 CAVIN1Q6NZI2 390 aaKnown RBP21.55■■□□□ 1.04
APP-215ENST00000474136 CSGALNACT2Q8N6G5 542 aa21.55■■□□□ 1.04
APP-215ENST00000474136 OR2I1PQ8NGU4 316 aa21.55■■□□□ 1.04
APP-215ENST00000474136 SPATA18Q8TC71 538 aa21.55■■□□□ 1.04
APP-215ENST00000474136 SAAL1Q96ER3 474 aa21.55■■□□□ 1.04
APP-215ENST00000474136 FUBP3Q96I24 572 aaKnown RBP eCLIP21.55■■□□□ 1.04
APP-215ENST00000474136 PNKPQ96T60 521 aa21.55■■□□□ 1.04
APP-215ENST00000474136 RNF38Q9H0F5 515 aa21.55■■□□□ 1.04
APP-215ENST00000474136 TNMDQ9H2S6 317 aa21.55■■□□□ 1.04
APP-215ENST00000474136 CLSTN2Q9H4D0 955 aa21.55■■□□□ 1.04
APP-215ENST00000474136 POLMQ9NP87 494 aaPredicted RBP21.55■■□□□ 1.04
APP-215ENST00000474136 SMPD4Q9NXE4 827 aa21.55■■□□□ 1.04
APP-215ENST00000474136 LAMA5O15230 3695 aa21.54■■□□□ 1.04
APP-215ENST00000474136 TCRBV21S2A2A0A5A6 115 aa21.54■■□□□ 1.04
APP-215ENST00000474136 UPK3BL1B0FP48 263 aa21.54■■□□□ 1.04
APP-215ENST00000474136 UPK3BL2E5RIL1 263 aa21.54■■□□□ 1.04
APP-215ENST00000474136 GABRDO14764 452 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms