RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 DNAJC12Q9UKB3 198 aa14.53□□□□□ -0.08
USF1-205ENST00000473969 TSPAN16Q9UKR8 245 aa14.53□□□□□ -0.08
USF1-205ENST00000473969 GOLGA6L19H0YKK7 550 aa14.52□□□□□ -0.09
USF1-205ENST00000473969 NRG2O14511 850 aaPredicted RBP14.52□□□□□ -0.09
USF1-205ENST00000473969 TNFRSF10BO14763 440 aa14.52□□□□□ -0.09
USF1-205ENST00000473969 ZNF263O14978 683 aa14.52□□□□□ -0.09
USF1-205ENST00000473969 CFHP08603 1231 aa14.52□□□□□ -0.09
USF1-205ENST00000473969 BCAT1P54687 386 aa14.52□□□□□ -0.09
USF1-205ENST00000473969 BST2Q10589 180 aaKnown RBP14.52□□□□□ -0.09
USF1-205ENST00000473969 RAPGEF1Q13905 1077 aa14.52□□□□□ -0.09
USF1-205ENST00000473969 NCAPHQ15003 741 aa14.52□□□□□ -0.09
USF1-205ENST00000473969 CNGA2Q16280 664 aa14.52□□□□□ -0.09
USF1-205ENST00000473969 SMYD5Q6GMV2 418 aa14.52□□□□□ -0.09
USF1-205ENST00000473969 GJB7Q6PEY0 223 aa14.52□□□□□ -0.09
USF1-205ENST00000473969 GPIHBP1Q8IV16 184 aa14.52□□□□□ -0.09
USF1-205ENST00000473969 MFSD6LQ8IWD5 586 aa14.52□□□□□ -0.09
USF1-205ENST00000473969 CELF5Q8N6W0 485 aaKnown RBP14.52□□□□□ -0.09
USF1-205ENST00000473969 ZMIZ2Q8NF64 920 aa14.52□□□□□ -0.09
USF1-205ENST00000473969 UBXN6Q9BZV1 441 aa14.52□□□□□ -0.09
USF1-205ENST00000473969 NACA2Q9H009 215 aa14.52□□□□□ -0.09
USF1-205ENST00000473969 MFSD1Q9H3U5 465 aa14.52□□□□□ -0.09
USF1-205ENST00000473969 BRD9Q9H8M2 597 aa14.52□□□□□ -0.09
USF1-205ENST00000473969 KIF9Q9HAQ2 790 aa14.52□□□□□ -0.09
USF1-205ENST00000473969 TLR8Q9NR97 1041 aaKnown RBP14.52□□□□□ -0.09
USF1-205ENST00000473969 TDP1Q9NUW8 608 aa14.52□□□□□ -0.09
USF1-205ENST00000473969 CHORDC1Q9UHD1 332 aaPredicted RBP14.52□□□□□ -0.09
USF1-205ENST00000473969 DOCK6Q96HP0 2047 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 ZNF840PA6NDX5 716 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 TMEM221A6NGB7 291 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 M0QYV0 167 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 RNF225M0QZC1 329 aaPredicted RBP14.51□□□□□ -0.09
USF1-205ENST00000473969 M0R296 226 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 O00370 1275 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 STK25O00506 426 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 XPO1O14980 1071 aaKnown RBP14.51□□□□□ -0.09
USF1-205ENST00000473969 THAP12O43422 761 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 NARSO43776 548 aaKnown RBP14.51□□□□□ -0.09
USF1-205ENST00000473969 SETSIPP0DME0 302 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 BRD2P25440 801 aaKnown RBP14.51□□□□□ -0.09
USF1-205ENST00000473969 GNA15P30679 374 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 GDI1P31150 447 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 BPIFB4P59827 614 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 GPC5P78333 572 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 UBXN1Q04323 297 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 PTK2Q05397 1052 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 GRM2Q14416 872 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 NFKBIBQ15653 356 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 CC2D1AQ6P1N0 951 aaPredicted RBP14.51□□□□□ -0.09
USF1-205ENST00000473969 LCLAT1Q6UWP7 414 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 DHX40Q8IX18 779 aaKnown RBP14.51□□□□□ -0.09
USF1-205ENST00000473969 ARL14EPQ8N8R7 260 aaPredicted RBP14.51□□□□□ -0.09
USF1-205ENST00000473969 TTC16Q8NEE8 873 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 UBA3Q8TBC4 463 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 BPIFB1Q8TDL5 484 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 IRF7Q92985 503 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 FUCA2Q9BTY2 467 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 PLA2G2FQ9BZM2 168 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 SMOC2Q9H3U7 446 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 LRRC4Q9HBW1 653 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 SLC2A4RGQ9NR83 387 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 IL37Q9NZH6 218 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 WNT16Q9UBV4 365 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 NOTCH4Q99466 2003 aa14.51□□□□□ -0.09
USF1-205ENST00000473969 C2orf78A6NCI8 922 aa14.5□□□□□ -0.09
USF1-205ENST00000473969 FAM86C2PA6NEL3 165 aa14.5□□□□□ -0.09
USF1-205ENST00000473969 LRRC10BA6NIK2 292 aa14.5□□□□□ -0.09
USF1-205ENST00000473969 LGALS16A8MUM7 142 aa14.5□□□□□ -0.09
USF1-205ENST00000473969 GPR37L1O60883 481 aa14.5□□□□□ -0.09
USF1-205ENST00000473969 TADA3O75528 432 aa14.5□□□□□ -0.09
USF1-205ENST00000473969 ZNF18P17022 549 aa14.5□□□□□ -0.09
USF1-205ENST00000473969 FCARP24071 287 aa14.5□□□□□ -0.09
USF1-205ENST00000473969 ZNF132P52740 706 aa14.5□□□□□ -0.09
USF1-205ENST00000473969 APBA1Q02410 837 aa14.5□□□□□ -0.09
USF1-205ENST00000473969 PDE4CQ08493 712 aa14.5□□□□□ -0.09
USF1-205ENST00000473969 KCNMA1Q12791 1236 aa14.5□□□□□ -0.09
USF1-205ENST00000473969 ZNF268Q14587 947 aaPredicted RBP14.5□□□□□ -0.09
USF1-205ENST00000473969 ARHGAP29Q52LW3 1261 aa14.5□□□□□ -0.09
USF1-205ENST00000473969 HECTD3Q5T447 861 aa14.5□□□□□ -0.09
USF1-205ENST00000473969 KLHDC7AQ5VTJ3 777 aa14.5□□□□□ -0.09
USF1-205ENST00000473969 POTEHQ6S545 545 aa14.5□□□□□ -0.09
USF1-205ENST00000473969 VITQ6UXI7 678 aa14.5□□□□□ -0.09
USF1-205ENST00000473969 PIGZQ86VD9 579 aa14.5□□□□□ -0.09
USF1-205ENST00000473969 SIX6OS1Q8N1H7 587 aa14.5□□□□□ -0.09
USF1-205ENST00000473969 ARHGAP18Q8N392 663 aa14.5□□□□□ -0.09
USF1-205ENST00000473969 CSGALNACT1Q8TDX6 532 aa14.5□□□□□ -0.09
USF1-205ENST00000473969 PBXIP1Q96AQ6 731 aa14.5□□□□□ -0.09
USF1-205ENST00000473969 SHDQ96IW2 340 aa14.5□□□□□ -0.09
USF1-205ENST00000473969 CYP2S1Q96SQ9 504 aa14.5□□□□□ -0.09
USF1-205ENST00000473969 SMG9Q9H0W8 520 aaKnown RBP14.5□□□□□ -0.09
USF1-205ENST00000473969 SIX2Q9NPC8 291 aa14.5□□□□□ -0.09
USF1-205ENST00000473969 GMIPQ9P107 970 aa14.5□□□□□ -0.09
USF1-205ENST00000473969 CNTN6Q9UQ52 1028 aa14.5□□□□□ -0.09
USF1-205ENST00000473969 SCML2Q9UQR0 700 aa14.5□□□□□ -0.09
USF1-205ENST00000473969 DAAM1Q9Y4D1 1078 aa14.5□□□□□ -0.09
USF1-205ENST00000473969 BDP1A6H8Y1 2624 aa14.49□□□□□ -0.09
USF1-205ENST00000473969 NCANO14594 1321 aa14.49□□□□□ -0.09
USF1-205ENST00000473969 HHLA1C9JL84 531 aa14.49□□□□□ -0.09
USF1-205ENST00000473969 SERPINC1P01008 464 aa14.49□□□□□ -0.09
USF1-205ENST00000473969 MBL2P11226 248 aaPredicted RBP14.49□□□□□ -0.09
USF1-205ENST00000473969 RALAP11233 206 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms