RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 PNPLA7Q6ZV29 1317 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 A0A1W2PP64 1363 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 MED23Q9ULK4 1368 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 THSD7BQ9C0I4 1608 aa5.38□□□□□ -1.55
TMEM39A-206ENST00000473684 CCDC163A0A0D9SF12 145 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 PABPN1LA6NDY0 278 aaKnown RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 GOLGA8MH3BSY2 632 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 ALOX15BO15296 676 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 TBX10O75333 385 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 FKBP9O95302 570 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 KRT6AP02538 564 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 KRT6BP04259 564 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 CAPNS1P04632 268 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 RAB6AP20340 208 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 M6PRP20645 277 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 EPHB2P29323 1055 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 UBA7P41226 1012 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 IARSP41252 1262 aaKnown RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 GRIA2P42262 883 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 HNRNPFP52597 415 aaKnown RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 POLGP54098 1239 aaPredicted RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 ASPHQ12797 758 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 IKQ13123 557 aaPredicted RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 MED21Q13503 144 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 KRT31Q15323 416 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 VWA3BQ502W6 1294 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 HERC4Q5GLZ8 1057 aaPredicted RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 CDPF1Q6NVV7 123 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 RWDD4Q6NW29 188 aaKnown RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 WDR59Q6PJI9 974 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 BTNL9Q6UXG8 535 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 HDGFL2Q7Z4V5 671 aaPredicted RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 SLC51BQ86UW2 128 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 LRRC59Q96AG4 307 aaKnown RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 SLC7A6OSQ96CW6 309 aaPredicted RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 ZNF274Q96GC6 653 aaPredicted RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 KREMEN1Q96MU8 473 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 PSMG3-AS1Q96PY0 264 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 KRT12Q99456 494 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 TTC1Q99614 292 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 AIFM2Q9BRQ8 373 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 GPATCH1Q9BRR8 931 aaKnown RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 TUBB6Q9BUF5 446 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 SLC12A5Q9H2X9 1139 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 SEMA6CQ9H3T2 930 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 PALMDQ9NP74 551 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 SAR1AQ9NR31 198 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 MTRF1LQ9UGC7 380 aaKnown RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 ATPIF1Q9UII2 106 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 EXOC7Q9UPT5 735 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 ERVK-11Q9UQG0 969 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 IFT52Q9Y366 437 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 ZNF451Q9Y4E5 1061 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 TNRC6CQ9HCJ0 1690 aaKnown RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 TTC26A0AVF1 554 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 SYCE1LA8MT33 242 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 TCP11X1B4DZS4 312 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 RNF225M0QZC1 329 aaPredicted RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 HGSO14964 777 aaPredicted RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 MAPK13O15264 365 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 SHOXO15266 292 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 RGS16O15492 202 aaPredicted RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 RAD51CO43502 376 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 RNASEH1O60930 286 aaKnown RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 KRT75O95678 551 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 S100BP04271 92 aaPredicted RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 ENO2P09104 434 aaPredicted RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 SPATA31C1P0DKV0 1188 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 B2MP61769 119 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 RNASELQ05823 741 aaKnown RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 NIPAL4Q0D2K0 466 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 NDUFAF5Q5TEU4 345 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 IZUMO2Q6UXV1 221 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 DCDC5Q6ZRR9 648 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 ARHGEF18Q6ZSZ5 1173 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 MIER3Q7Z3K6 550 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 KBTBD2Q8IY47 623 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 ADSSL1Q8N142 457 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 LZTR1Q8N653 840 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 SPATA5Q8NB90 893 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 TNIP2Q8NFZ5 429 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 LILRB4Q8NHJ6 448 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 ANGPTL6Q8NI99 470 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 RIN3Q8TB24 985 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 DDI1Q8WTU0 396 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 PEX13Q92968 403 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 FAM46AQ96IP4 442 aaKnown RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 EXOC2Q96KP1 924 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 FNBP1Q96RU3 617 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 OLFM1Q99784 485 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 TLR10Q9BXR5 811 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 AGXT2Q9BYV1 514 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 CEP41Q9BYV8 373 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 OSBPL6Q9BZF3 934 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 SHCBP1LQ9BZQ2 653 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 CCDC177Q9NQR7 707 aaPredicted RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 ARMC1Q9NVT9 282 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 THAP1Q9NVV9 213 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 TMCC3Q9ULS5 477 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms