RNA–Protein interactions for RNA: ENST00000473522.1

RPUSD3-214, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-214ENST00000473522 PDZD8Q8NEN9 1154 aa18.71■□□□□ 0.59
RPUSD3-214ENST00000473522 SLITRK1Q96PX8 696 aa18.71■□□□□ 0.59
RPUSD3-214ENST00000473522 TRMT61BQ9BVS5 477 aaKnown RBP18.71■□□□□ 0.59
RPUSD3-214ENST00000473522 HSD3B7Q9H2F3 369 aa18.71■□□□□ 0.59
RPUSD3-214ENST00000473522 FBXO44Q9H4M3 255 aa18.71■□□□□ 0.59
RPUSD3-214ENST00000473522 SIX2Q9NPC8 291 aa18.71■□□□□ 0.59
RPUSD3-214ENST00000473522 O00370 1275 aa18.7■□□□□ 0.58
RPUSD3-214ENST00000473522 AVPR1AP37288 418 aa18.7■□□□□ 0.58
RPUSD3-214ENST00000473522 KIF11P52732 1056 aa18.7■□□□□ 0.58
RPUSD3-214ENST00000473522 PFKPQ01813 784 aa18.7■□□□□ 0.58
RPUSD3-214ENST00000473522 KRT31Q15323 416 aa18.7■□□□□ 0.58
RPUSD3-214ENST00000473522 ANO6Q4KMQ2 910 aa18.7■□□□□ 0.58
RPUSD3-214ENST00000473522 PKDCCQ504Y2 493 aa18.7■□□□□ 0.58
RPUSD3-214ENST00000473522 LCLAT1Q6UWP7 414 aa18.7■□□□□ 0.58
RPUSD3-214ENST00000473522 TFAP2BQ92481 460 aa18.7■□□□□ 0.58
RPUSD3-214ENST00000473522 USP13Q92995 863 aaPredicted RBP18.7■□□□□ 0.58
RPUSD3-214ENST00000473522 CYP2S1Q96SQ9 504 aa18.7■□□□□ 0.58
RPUSD3-214ENST00000473522 ZSWIM1Q9BR11 485 aa18.7■□□□□ 0.58
RPUSD3-214ENST00000473522 TDP1Q9NUW8 608 aa18.7■□□□□ 0.58
RPUSD3-214ENST00000473522 LIMA1Q9UHB6 759 aaKnown RBP18.7■□□□□ 0.58
RPUSD3-214ENST00000473522 CHORDC1Q9UHD1 332 aaPredicted RBP18.7■□□□□ 0.58
RPUSD3-214ENST00000473522 TSPAN16Q9UKR8 245 aa18.7■□□□□ 0.58
RPUSD3-214ENST00000473522 USP3Q9Y6I4 520 aa18.7■□□□□ 0.58
RPUSD3-214ENST00000473522 C2orf78A6NCI8 922 aa18.69■□□□□ 0.58
RPUSD3-214ENST00000473522 FAM86C2PA6NEL3 165 aa18.69■□□□□ 0.58
RPUSD3-214ENST00000473522 PRAMEF12O95522 483 aa18.69■□□□□ 0.58
RPUSD3-214ENST00000473522 OLFM2O95897 454 aa18.69■□□□□ 0.58
RPUSD3-214ENST00000473522 CFHP08603 1231 aa18.69■□□□□ 0.58
RPUSD3-214ENST00000473522 TCF3P15923 654 aa18.69■□□□□ 0.58
RPUSD3-214ENST00000473522 HDCP19113 662 aa18.69■□□□□ 0.58
RPUSD3-214ENST00000473522 PDE6CP51160 858 aa18.69■□□□□ 0.58
RPUSD3-214ENST00000473522 STILQ15468 1287 aa18.69■□□□□ 0.58
RPUSD3-214ENST00000473522 RAB41Q5JT25 222 aa18.69■□□□□ 0.58
RPUSD3-214ENST00000473522 GJB7Q6PEY0 223 aa18.69■□□□□ 0.58
RPUSD3-214ENST00000473522 HFE2Q6ZVN8 426 aa18.69■□□□□ 0.58
RPUSD3-214ENST00000473522 TTC30AQ86WT1 665 aa18.69■□□□□ 0.58
RPUSD3-214ENST00000473522 GPIHBP1Q8IV16 184 aa18.69■□□□□ 0.58
RPUSD3-214ENST00000473522 RBBP8NLQ8NC74 664 aaPredicted RBP18.69■□□□□ 0.58
RPUSD3-214ENST00000473522 PBXIP1Q96AQ6 731 aa18.69■□□□□ 0.58
RPUSD3-214ENST00000473522 SLC22A12Q96S37 553 aa18.69■□□□□ 0.58
RPUSD3-214ENST00000473522 SCML2Q9UQR0 700 aa18.69■□□□□ 0.58
RPUSD3-214ENST00000473522 DOCK6Q96HP0 2047 aa18.68■□□□□ 0.58
RPUSD3-214ENST00000473522 TRAV19A0A0A6YYK7 116 aa18.68■□□□□ 0.58
RPUSD3-214ENST00000473522 KRBA1A5PL33 1030 aa18.68■□□□□ 0.58
RPUSD3-214ENST00000473522 ARNTLO00327 626 aa18.68■□□□□ 0.58
RPUSD3-214ENST00000473522 DPYSL4O14531 572 aa18.68■□□□□ 0.58
RPUSD3-214ENST00000473522 CHADO15335 359 aa18.68■□□□□ 0.58
RPUSD3-214ENST00000473522 OAS1P00973 400 aaKnown RBP18.68■□□□□ 0.58
RPUSD3-214ENST00000473522 USP17L7P0C7H9 530 aa18.68■□□□□ 0.58
RPUSD3-214ENST00000473522 CD19P15391 556 aa18.68■□□□□ 0.58
RPUSD3-214ENST00000473522 MLLT6P55198 1093 aaPredicted RBP18.68■□□□□ 0.58
RPUSD3-214ENST00000473522 SLC8A3P57103 927 aa18.68■□□□□ 0.58
RPUSD3-214ENST00000473522 SLC7A9P82251 487 aa18.68■□□□□ 0.58
RPUSD3-214ENST00000473522 APBA1Q02410 837 aa18.68■□□□□ 0.58
RPUSD3-214ENST00000473522 SLC44A4Q53GD3 710 aa18.68■□□□□ 0.58
RPUSD3-214ENST00000473522 GPRIN1Q7Z2K8 1008 aa18.68■□□□□ 0.58
RPUSD3-214ENST00000473522 ARL14EPQ8N8R7 260 aaPredicted RBP18.68■□□□□ 0.58
RPUSD3-214ENST00000473522 BPIFB1Q8TDL5 484 aa18.68■□□□□ 0.58
RPUSD3-214ENST00000473522 SHC3Q92529 594 aa18.68■□□□□ 0.58
RPUSD3-214ENST00000473522 DNASE1L2Q92874 299 aa18.68■□□□□ 0.58
RPUSD3-214ENST00000473522 IRF7Q92985 503 aa18.68■□□□□ 0.58
RPUSD3-214ENST00000473522 FBXO32Q969P5 355 aa18.68■□□□□ 0.58
RPUSD3-214ENST00000473522 RNF38Q9H0F5 515 aa18.68■□□□□ 0.58
RPUSD3-214ENST00000473522 VPS16Q9H269 839 aa18.68■□□□□ 0.58
RPUSD3-214ENST00000473522 KIF9Q9HAQ2 790 aa18.68■□□□□ 0.58
RPUSD3-214ENST00000473522 TAB2Q9NYJ8 693 aa18.68■□□□□ 0.58
RPUSD3-214ENST00000473522 ARHGAP26Q9UNA1 814 aa18.68■□□□□ 0.58
RPUSD3-214ENST00000473522 SMTNL1A8MU46 457 aa18.67■□□□□ 0.58
RPUSD3-214ENST00000473522 BECN2A8MW95 431 aa18.67■□□□□ 0.58
RPUSD3-214ENST00000473522 ZNF263O14978 683 aa18.67■□□□□ 0.58
RPUSD3-214ENST00000473522 XPO1O14980 1071 aaKnown RBP18.67■□□□□ 0.58
RPUSD3-214ENST00000473522 GDI1P31150 447 aa18.67■□□□□ 0.58
RPUSD3-214ENST00000473522 TUBP50607 506 aa18.67■□□□□ 0.58
RPUSD3-214ENST00000473522 PDE4CQ08493 712 aa18.67■□□□□ 0.58
RPUSD3-214ENST00000473522 GRM2Q14416 872 aa18.67■□□□□ 0.58
RPUSD3-214ENST00000473522 KLHDC7AQ5VTJ3 777 aa18.67■□□□□ 0.58
RPUSD3-214ENST00000473522 APTXQ7Z2E3 356 aaKnown RBP18.67■□□□□ 0.58
RPUSD3-214ENST00000473522 PIGZQ86VD9 579 aa18.67■□□□□ 0.58
RPUSD3-214ENST00000473522 DHX40Q8IX18 779 aaKnown RBP18.67■□□□□ 0.58
RPUSD3-214ENST00000473522 ZNF276Q8N554 614 aa18.67■□□□□ 0.58
RPUSD3-214ENST00000473522 KIAA1958Q8N8K9 716 aa18.67■□□□□ 0.58
RPUSD3-214ENST00000473522 SLC35F5Q8WV83 523 aa18.67■□□□□ 0.58
RPUSD3-214ENST00000473522 SMG9Q9H0W8 520 aaKnown RBP18.67■□□□□ 0.58
RPUSD3-214ENST00000473522 BRD9Q9H8M2 597 aa18.67■□□□□ 0.58
RPUSD3-214ENST00000473522 PLCB1Q9NQ66 1216 aa18.67■□□□□ 0.58
RPUSD3-214ENST00000473522 HESX1Q9UBX0 185 aa18.67■□□□□ 0.58
RPUSD3-214ENST00000473522 DNAJC12Q9UKB3 198 aa18.67■□□□□ 0.58
RPUSD3-214ENST00000473522 FBXL21Q9UKT6 434 aa18.67■□□□□ 0.58
RPUSD3-214ENST00000473522 CCL26Q9Y258 94 aa18.67■□□□□ 0.58
RPUSD3-214ENST00000473522 DOCK8Q8NF50 2099 aa18.67■□□□□ 0.58
RPUSD3-214ENST00000473522 SYCE3A1L190 88 aa18.66■□□□□ 0.58
RPUSD3-214ENST00000473522 PLA2G4AP47712 749 aa18.66■□□□□ 0.58
RPUSD3-214ENST00000473522 PGFP49763 221 aa18.66■□□□□ 0.58
RPUSD3-214ENST00000473522 ZNF165P49910 485 aa18.66■□□□□ 0.58
RPUSD3-214ENST00000473522 COPB1P53618 953 aaKnown RBP18.66■□□□□ 0.58
RPUSD3-214ENST00000473522 BCAT1P54687 386 aa18.66■□□□□ 0.58
RPUSD3-214ENST00000473522 STARD6P59095 220 aa18.66■□□□□ 0.58
RPUSD3-214ENST00000473522 ZXDBP98169 803 aa18.66■□□□□ 0.58
RPUSD3-214ENST00000473522 PRKCQQ04759 706 aa18.66■□□□□ 0.58
RPUSD3-214ENST00000473522 BST2Q10589 180 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms