RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 NIF3L1Q9GZT8 377 aa19.2■□□□□ 0.66
SNX4-204ENST00000473417 DPEP3Q9H4B8 488 aa19.2■□□□□ 0.66
SNX4-204ENST00000473417 LMAN1LQ9HAT1 526 aa19.2■□□□□ 0.66
SNX4-204ENST00000473417 CRTAC1Q9NQ79 661 aa19.2■□□□□ 0.66
SNX4-204ENST00000473417 GTSE1Q9NYZ3 720 aa19.2■□□□□ 0.66
SNX4-204ENST00000473417 COQ4Q9Y3A0 265 aa19.2■□□□□ 0.66
SNX4-204ENST00000473417 PCDHGA2Q9Y5H1 932 aa19.2■□□□□ 0.66
SNX4-204ENST00000473417 SPECC1L-ADORA2AF8WAN1 911 aa19.19■□□□□ 0.66
SNX4-204ENST00000473417 AVPR1AP37288 418 aa19.19■□□□□ 0.66
SNX4-204ENST00000473417 KLHL40Q2TBA0 621 aa19.19■□□□□ 0.66
SNX4-204ENST00000473417 HSP90AA4PQ58FG1 418 aa19.19■□□□□ 0.66
SNX4-204ENST00000473417 TXNDC11Q6PKC3 985 aa19.19■□□□□ 0.66
SNX4-204ENST00000473417 C4orf50Q6ZRC1 276 aa19.19■□□□□ 0.66
SNX4-204ENST00000473417 MON1AQ86VX9 555 aa19.19■□□□□ 0.66
SNX4-204ENST00000473417 RALGPS2Q86X27 583 aaPredicted RBP19.19■□□□□ 0.66
SNX4-204ENST00000473417 USP13Q92995 863 aaPredicted RBP19.19■□□□□ 0.66
SNX4-204ENST00000473417 TATDN2Q93075 761 aa19.19■□□□□ 0.66
SNX4-204ENST00000473417 MYLPFQ96A32 169 aa19.19■□□□□ 0.66
SNX4-204ENST00000473417 THAP9Q9H5L6 903 aa19.19■□□□□ 0.66
SNX4-204ENST00000473417 KIF9Q9HAQ2 790 aa19.19■□□□□ 0.66
SNX4-204ENST00000473417 CCL26Q9Y258 94 aa19.19■□□□□ 0.66
SNX4-204ENST00000473417 AFPP02771 609 aaKnown RBP19.18■□□□□ 0.66
SNX4-204ENST00000473417 TDGF1P13385 188 aa19.18■□□□□ 0.66
SNX4-204ENST00000473417 PTPN1P18031 435 aaKnown RBP19.18■□□□□ 0.66
SNX4-204ENST00000473417 TYRO3Q06418 890 aa19.18■□□□□ 0.66
SNX4-204ENST00000473417 TNK2Q07912 1038 aa19.18■□□□□ 0.66
SNX4-204ENST00000473417 LRMPQ12912 555 aa19.18■□□□□ 0.66
SNX4-204ENST00000473417 MAPRE1Q15691 268 aaKnown RBP19.18■□□□□ 0.66
SNX4-204ENST00000473417 MDH1BQ5I0G3 518 aa19.18■□□□□ 0.66
SNX4-204ENST00000473417 TXNDC8Q6A555 127 aa19.18■□□□□ 0.66
SNX4-204ENST00000473417 TSSK4Q6SA08 328 aa19.18■□□□□ 0.66
SNX4-204ENST00000473417 SCN4BQ8IWT1 228 aa19.18■□□□□ 0.66
SNX4-204ENST00000473417 SUMF1Q8NBK3 374 aa19.18■□□□□ 0.66
SNX4-204ENST00000473417 ENOX1Q8TC92 643 aaKnown RBP19.18■□□□□ 0.66
SNX4-204ENST00000473417 TDP1Q9NUW8 608 aa19.18■□□□□ 0.66
SNX4-204ENST00000473417 THG1LQ9NWX6 298 aaKnown RBP19.18■□□□□ 0.66
SNX4-204ENST00000473417 ZSCAN32Q9NX65 697 aa19.18■□□□□ 0.66
SNX4-204ENST00000473417 LILRB5O75023 590 aa19.17■□□□□ 0.66
SNX4-204ENST00000473417 CD58P19256 250 aa19.17■□□□□ 0.66
SNX4-204ENST00000473417 MTIF2P46199 727 aaKnown RBP19.17■□□□□ 0.66
SNX4-204ENST00000473417 CCR3P51677 355 aa19.17■□□□□ 0.66
SNX4-204ENST00000473417 NDST1P52848 882 aa19.17■□□□□ 0.66
SNX4-204ENST00000473417 FOXK2Q01167 660 aa19.17■□□□□ 0.66
SNX4-204ENST00000473417 CYP27A1Q02318 531 aa19.17■□□□□ 0.66
SNX4-204ENST00000473417 CETN1Q12798 172 aa19.17■□□□□ 0.66
SNX4-204ENST00000473417 ORC1Q13415 861 aa19.17■□□□□ 0.66
SNX4-204ENST00000473417 LRRC32Q14392 662 aa19.17■□□□□ 0.66
SNX4-204ENST00000473417 GAS6Q14393 721 aa19.17■□□□□ 0.66
SNX4-204ENST00000473417 ZNF268Q14587 947 aaPredicted RBP19.17■□□□□ 0.66
SNX4-204ENST00000473417 VSTM1Q6UX27 236 aa19.17■□□□□ 0.66
SNX4-204ENST00000473417 FAM114A1Q8IWE2 563 aa19.17■□□□□ 0.66
SNX4-204ENST00000473417 TTC8Q8TAM2 541 aa19.17■□□□□ 0.66
SNX4-204ENST00000473417 RIN3Q8TB24 985 aa19.17■□□□□ 0.66
SNX4-204ENST00000473417 SPATA17Q96L03 361 aa19.17■□□□□ 0.66
SNX4-204ENST00000473417 FAM83CQ9BQN1 747 aa19.17■□□□□ 0.66
SNX4-204ENST00000473417 FAM126AQ9BYI3 521 aaPredicted RBP19.17■□□□□ 0.66
SNX4-204ENST00000473417 CYP3A43Q9HB55 503 aa19.17■□□□□ 0.66
SNX4-204ENST00000473417 SAMSN1Q9NSI8 373 aaKnown RBP19.17■□□□□ 0.66
SNX4-204ENST00000473417 MAGEC2Q9UBF1 373 aaPredicted RBP19.17■□□□□ 0.66
SNX4-204ENST00000473417 NFE2L3Q9Y4A8 694 aa19.17■□□□□ 0.66
SNX4-204ENST00000473417 EML5Q05BV3 1969 aa19.16■□□□□ 0.66
SNX4-204ENST00000473417 PMM2O15305 246 aa19.16■□□□□ 0.66
SNX4-204ENST00000473417 P4HA2O15460 535 aa19.16■□□□□ 0.66
SNX4-204ENST00000473417 ITPRIPL2Q3MIP1 535 aa19.16■□□□□ 0.66
SNX4-204ENST00000473417 ACOT1Q86TX2 421 aa19.16■□□□□ 0.66
SNX4-204ENST00000473417 B3GALNT2Q8NCR0 500 aa19.16■□□□□ 0.66
SNX4-204ENST00000473417 MYCBPAPQ8TBZ2 947 aa19.16■□□□□ 0.66
SNX4-204ENST00000473417 PCED1BQ96HM7 432 aa19.16■□□□□ 0.66
SNX4-204ENST00000473417 CEP295NLQ96MC4 621 aa19.16■□□□□ 0.66
SNX4-204ENST00000473417 HPS4Q9NQG7 708 aa19.16■□□□□ 0.66
SNX4-204ENST00000473417 GKN1Q9NS71 199 aa19.16■□□□□ 0.66
SNX4-204ENST00000473417 HMGXB4Q9UGU5 601 aa19.16■□□□□ 0.66
SNX4-204ENST00000473417 GPR179Q6PRD1 2367 aa19.15■□□□□ 0.66
SNX4-204ENST00000473417 ATG2BQ96BY7 2078 aa19.15■□□□□ 0.66
SNX4-204ENST00000473417 BDNFP23560 247 aa19.15■□□□□ 0.66
SNX4-204ENST00000473417 PPP2R5DQ14738 602 aa19.15■□□□□ 0.66
SNX4-204ENST00000473417 ATRIPQ8WXE1 791 aa19.15■□□□□ 0.66
SNX4-204ENST00000473417 RUBCNQ92622 972 aa19.15■□□□□ 0.66
SNX4-204ENST00000473417 TNIP3Q96KP6 325 aa19.15■□□□□ 0.66
SNX4-204ENST00000473417 TWNKQ96RR1 684 aa19.15■□□□□ 0.66
SNX4-204ENST00000473417 ARID3AQ99856 593 aa19.15■□□□□ 0.66
SNX4-204ENST00000473417 EPC1Q9H2F5 836 aa19.15■□□□□ 0.66
SNX4-204ENST00000473417 RBM12Q9NTZ6 932 aaKnown RBP19.15■□□□□ 0.66
SNX4-204ENST00000473417 KCNJ18B7U540 433 aa19.14■□□□□ 0.65
SNX4-204ENST00000473417 ID4P47928 161 aa19.14■□□□□ 0.65
SNX4-204ENST00000473417 INCA1Q0VD86 236 aa19.14■□□□□ 0.65
SNX4-204ENST00000473417 USP4Q13107 963 aa19.14■□□□□ 0.65
SNX4-204ENST00000473417 RUNX3Q13761 415 aa19.14■□□□□ 0.65
SNX4-204ENST00000473417 CCINQ13939 588 aa19.14■□□□□ 0.65
SNX4-204ENST00000473417 KCNJ12Q14500 433 aa19.14■□□□□ 0.65
SNX4-204ENST00000473417 PON2Q15165 354 aa19.14■□□□□ 0.65
SNX4-204ENST00000473417 DGKKQ5KSL6 1271 aa19.14■□□□□ 0.65
SNX4-204ENST00000473417 Q6ZS52 159 aa19.14■□□□□ 0.65
SNX4-204ENST00000473417 UNC93AQ86WB7 457 aa19.14■□□□□ 0.65
SNX4-204ENST00000473417 SPEM1Q8N4L4 309 aa19.14■□□□□ 0.65
SNX4-204ENST00000473417 EHBP1Q8NDI1 1231 aa19.14■□□□□ 0.65
SNX4-204ENST00000473417 LMO3Q8TAP4 145 aa19.14■□□□□ 0.65
SNX4-204ENST00000473417 WHAMMQ8TF30 809 aa19.14■□□□□ 0.65
SNX4-204ENST00000473417 CHFRQ96EP1 664 aa19.14■□□□□ 0.65
SNX4-204ENST00000473417 FAXDC2Q96IV6 333 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms