RNA–Protein interactions for RNA: ENST00000473079.1

EPHB3-202, Transcript of EPH receptor B3, humanhuman

TSL 2

Gene EPHB3, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-202ENST00000473079 SPATA20Q8TB22 786 aa22.05■■□□□ 1.12
EPHB3-202ENST00000473079 ATP2A3Q93084 1043 aa22.05■■□□□ 1.12
EPHB3-202ENST00000473079 EXOC4Q96A65 974 aa22.05■■□□□ 1.12
EPHB3-202ENST00000473079 SMARCD1Q96GM5 515 aa22.05■■□□□ 1.12
EPHB3-202ENST00000473079 TIGD1Q96MW7 591 aa22.05■■□□□ 1.12
EPHB3-202ENST00000473079 KCNK16Q96T55 309 aa22.05■■□□□ 1.12
EPHB3-202ENST00000473079 ECT2Q9H8V3 914 aa22.05■■□□□ 1.12
EPHB3-202ENST00000473079 DMAP1Q9NPF5 467 aaPredicted RBP22.05■■□□□ 1.12
EPHB3-202ENST00000473079 OAS1P00973 400 aaKnown RBP22.04■■□□□ 1.12
EPHB3-202ENST00000473079 HOXA6P31267 233 aa22.04■■□□□ 1.12
EPHB3-202ENST00000473079 GJA4P35212 333 aa22.04■■□□□ 1.12
EPHB3-202ENST00000473079 IFNAR2P48551 515 aa22.04■■□□□ 1.12
EPHB3-202ENST00000473079 NDST1P52848 882 aa22.04■■□□□ 1.12
EPHB3-202ENST00000473079 ZXDBP98169 803 aa22.04■■□□□ 1.12
EPHB3-202ENST00000473079 INCA1Q0VD86 236 aa22.04■■□□□ 1.12
EPHB3-202ENST00000473079 GRSF1Q12849 480 aaKnown RBP eCLIP22.04■■□□□ 1.12
EPHB3-202ENST00000473079 EML3Q32P44 896 aa22.04■■□□□ 1.12
EPHB3-202ENST00000473079 ZNF658Q5TYW1 1059 aaPredicted RBP22.04■■□□□ 1.12
EPHB3-202ENST00000473079 SPOPLQ6IQ16 392 aa22.04■■□□□ 1.12
EPHB3-202ENST00000473079 Q6ZS52 159 aa22.04■■□□□ 1.12
EPHB3-202ENST00000473079 TAS1R2Q8TE23 839 aa22.04■■□□□ 1.12
EPHB3-202ENST00000473079 FAXDC2Q96IV6 333 aa22.04■■□□□ 1.12
EPHB3-202ENST00000473079 MED10Q9BTT4 135 aa22.04■■□□□ 1.12
EPHB3-202ENST00000473079 GTPBP4Q9BZE4 634 aaKnown RBP22.04■■□□□ 1.12
EPHB3-202ENST00000473079 IMPG2Q9BZV3 1241 aa22.04■■□□□ 1.12
EPHB3-202ENST00000473079 RNF38Q9H0F5 515 aa22.04■■□□□ 1.12
EPHB3-202ENST00000473079 CYP3A43Q9HB55 503 aa22.04■■□□□ 1.12
EPHB3-202ENST00000473079 TMEM8AQ9HCN3 771 aa22.04■■□□□ 1.12
EPHB3-202ENST00000473079 CSNK1G1Q9HCP0 422 aa22.04■■□□□ 1.12
EPHB3-202ENST00000473079 WDR87Q6ZQQ6 2873 aa22.03■■□□□ 1.12
EPHB3-202ENST00000473079 FAM92AA1XBS5 289 aa22.03■■□□□ 1.12
EPHB3-202ENST00000473079 TRIM49P0CI25 452 aa22.03■■□□□ 1.12
EPHB3-202ENST00000473079 TRIM49CP0CI26 452 aa22.03■■□□□ 1.12
EPHB3-202ENST00000473079 NR1H3Q13133 447 aa22.03■■□□□ 1.12
EPHB3-202ENST00000473079 SNX30Q5VWJ9 437 aa22.03■■□□□ 1.12
EPHB3-202ENST00000473079 FSTL4Q6MZW2 842 aa22.03■■□□□ 1.12
EPHB3-202ENST00000473079 SMYD4Q8IYR2 804 aaPredicted RBP22.03■■□□□ 1.12
EPHB3-202ENST00000473079 WNT6Q9Y6F9 365 aa22.03■■□□□ 1.12
EPHB3-202ENST00000473079 PTPRZ1P23471 2315 aaPredicted RBP22.03■■□□□ 1.12
EPHB3-202ENST00000473079 ZNF292O60281 2723 aa22.03■■□□□ 1.12
EPHB3-202ENST00000473079 FAM186AA6NE01 2351 aa22.03■■□□□ 1.12
EPHB3-202ENST00000473079 ANAPC1Q9H1A4 1944 aa22.02■■□□□ 1.12
EPHB3-202ENST00000473079 K7ESF4 209 aa22.02■■□□□ 1.12
EPHB3-202ENST00000473079 LEFTY2O00292 366 aa22.02■■□□□ 1.12
EPHB3-202ENST00000473079 CETN3O15182 167 aa22.02■■□□□ 1.12
EPHB3-202ENST00000473079 SMC2O95347 1197 aa22.02■■□□□ 1.12
EPHB3-202ENST00000473079 TRIM21P19474 475 aaKnown RBP22.02■■□□□ 1.12
EPHB3-202ENST00000473079 DRD1P21728 446 aa22.02■■□□□ 1.12
EPHB3-202ENST00000473079 PRCPP42785 496 aa22.02■■□□□ 1.12
EPHB3-202ENST00000473079 GALK1P51570 392 aa22.02■■□□□ 1.12
EPHB3-202ENST00000473079 KRT39Q6A163 491 aa22.02■■□□□ 1.12
EPHB3-202ENST00000473079 ELOA2Q8IYF1 753 aaPredicted RBP22.02■■□□□ 1.12
EPHB3-202ENST00000473079 P2RY13Q9BPV8 354 aa22.02■■□□□ 1.12
EPHB3-202ENST00000473079 LINC00597Q9H2U6 94 aa22.02■■□□□ 1.12
EPHB3-202ENST00000473079 APOBEC3GQ9HC16 384 aaKnown RBP22.02■■□□□ 1.12
EPHB3-202ENST00000473079 FBRSL1Q9HCM7 1045 aaKnown RBP22.02■■□□□ 1.12
EPHB3-202ENST00000473079 HMGXB4Q9UGU5 601 aa22.02■■□□□ 1.12
EPHB3-202ENST00000473079 HOOK1Q9UJC3 728 aaKnown RBP22.02■■□□□ 1.12
EPHB3-202ENST00000473079 STX10O60499 249 aa22.01■■□□□ 1.11
EPHB3-202ENST00000473079 ATG13O75143 517 aa22.01■■□□□ 1.11
EPHB3-202ENST00000473079 AP1G2O75843 785 aa22.01■■□□□ 1.11
EPHB3-202ENST00000473079 ZC3H3Q8IXZ2 948 aaKnown RBP22.01■■□□□ 1.11
EPHB3-202ENST00000473079 CCDC150Q8NCX0 1101 aa22.01■■□□□ 1.11
EPHB3-202ENST00000473079 ZMIZ2Q8NF64 920 aa22.01■■□□□ 1.11
EPHB3-202ENST00000473079 SCAMP5Q8TAC9 235 aa22.01■■□□□ 1.11
EPHB3-202ENST00000473079 SLC2A14Q8TDB8 520 aa22.01■■□□□ 1.11
EPHB3-202ENST00000473079 FBXO32Q969P5 355 aa22.01■■□□□ 1.11
EPHB3-202ENST00000473079 HNRNPABQ99729 332 aaKnown RBP22.01■■□□□ 1.11
EPHB3-202ENST00000473079 SMOQ99835 787 aa22.01■■□□□ 1.11
EPHB3-202ENST00000473079 NIF3L1Q9GZT8 377 aa22.01■■□□□ 1.11
EPHB3-202ENST00000473079 PCDHA5Q9Y5H7 936 aa22.01■■□□□ 1.11
EPHB3-202ENST00000473079 FRYLO94915 3013 aa22■■□□□ 1.11
EPHB3-202ENST00000473079 ZNF638Q14966 1978 aaKnown RBP22■■□□□ 1.11
EPHB3-202ENST00000473079 CHURC1-FNTBB4DL54 471 aa22■■□□□ 1.11
EPHB3-202ENST00000473079 NFATC1O95644 943 aa22■■□□□ 1.11
EPHB3-202ENST00000473079 ABL1P00519 1130 aa22■■□□□ 1.11
EPHB3-202ENST00000473079 ZDHHC11BP0C7U3 371 aa22■■□□□ 1.11
EPHB3-202ENST00000473079 CCDC130P13994 396 aa22■■□□□ 1.11
EPHB3-202ENST00000473079 CNR2P34972 360 aa22■■□□□ 1.11
EPHB3-202ENST00000473079 TUBP50607 506 aa22■■□□□ 1.11
EPHB3-202ENST00000473079 SLC5A3P53794 718 aa22■■□□□ 1.11
EPHB3-202ENST00000473079 FBXO43Q4G163 708 aa22■■□□□ 1.11
EPHB3-202ENST00000473079 DDX42Q86XP3 938 aaKnown RBP eCLIP22■■□□□ 1.11
EPHB3-202ENST00000473079 C12orf29Q8N999 325 aa22■■□□□ 1.11
EPHB3-202ENST00000473079 NT5C1AQ9BXI3 368 aa22■■□□□ 1.11
EPHB3-202ENST00000473079 KRT82Q9NSB4 513 aa22■■□□□ 1.11
EPHB3-202ENST00000473079 CHORDC1Q9UHD1 332 aaPredicted RBP22■■□□□ 1.11
EPHB3-202ENST00000473079 SMG5Q9UPR3 1016 aaKnown RBP22■■□□□ 1.11
EPHB3-202ENST00000473079 CPQQ9Y646 472 aa22■■□□□ 1.11
EPHB3-202ENST00000473079 GVINP1Q7Z2Y8 2422 aa22■■□□□ 1.11
EPHB3-202ENST00000473079 SLC9A3R1O14745 358 aaPredicted RBP21.99■■□□□ 1.11
EPHB3-202ENST00000473079 CILPO75339 1184 aa21.99■■□□□ 1.11
EPHB3-202ENST00000473079 EPB41P11171 864 aaKnown RBP21.99■■□□□ 1.11
EPHB3-202ENST00000473079 FKBP3Q00688 224 aaKnown RBP21.99■■□□□ 1.11
EPHB3-202ENST00000473079 IFRD2Q12894 506 aaPredicted RBP21.99■■□□□ 1.11
EPHB3-202ENST00000473079 ORC1Q13415 861 aa21.99■■□□□ 1.11
EPHB3-202ENST00000473079 HECTD3Q5T447 861 aa21.99■■□□□ 1.11
EPHB3-202ENST00000473079 LONP2Q86WA8 852 aa21.99■■□□□ 1.11
EPHB3-202ENST00000473079 ADGRG2Q8IZP9 1017 aa21.99■■□□□ 1.11
EPHB3-202ENST00000473079 TTC39CQ8N584 583 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms