RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 BCAT1P54687 386 aa6.79□□□□□ -1.32
CLK1-209ENST00000472679 STK3Q13188 491 aa6.79□□□□□ -1.32
CLK1-209ENST00000472679 BMPR2Q13873 1038 aa6.79□□□□□ -1.32
CLK1-209ENST00000472679 CCNIQ14094 377 aa6.79□□□□□ -1.32
CLK1-209ENST00000472679 SLC35G1Q2M3R5 365 aa6.79□□□□□ -1.32
CLK1-209ENST00000472679 CERCAMQ5T4B2 595 aa6.79□□□□□ -1.32
CLK1-209ENST00000472679 ZNF618Q5T7W0 954 aa6.79□□□□□ -1.32
CLK1-209ENST00000472679 OLFML1Q6UWY5 402 aa6.79□□□□□ -1.32
CLK1-209ENST00000472679 CATSPERGQ6ZRH7 1159 aa6.79□□□□□ -1.32
CLK1-209ENST00000472679 DEPTORQ8TB45 409 aa6.79□□□□□ -1.32
CLK1-209ENST00000472679 BRI3BPQ8WY22 251 aa6.79□□□□□ -1.32
CLK1-209ENST00000472679 MPHOSPH6Q99547 160 aaKnown RBP6.79□□□□□ -1.32
CLK1-209ENST00000472679 CERS4Q9HA82 394 aa6.79□□□□□ -1.32
CLK1-209ENST00000472679 PADI4Q9UM07 663 aa6.79□□□□□ -1.32
CLK1-209ENST00000472679 PCDHGB2Q9Y5G2 931 aa6.79□□□□□ -1.32
CLK1-209ENST00000472679 INMTO95050 263 aa6.78□□□□□ -1.32
CLK1-209ENST00000472679 ABCB4P21439 1286 aa6.78□□□□□ -1.32
CLK1-209ENST00000472679 CXCR5P32302 372 aa6.78□□□□□ -1.32
CLK1-209ENST00000472679 RARRES1P49788 294 aa6.78□□□□□ -1.32
CLK1-209ENST00000472679 TGFB2P61812 414 aa6.78□□□□□ -1.32
CLK1-209ENST00000472679 MANEALQ5VSG8 457 aa6.78□□□□□ -1.32
CLK1-209ENST00000472679 TXLNBQ8N3L3 684 aa6.78□□□□□ -1.32
CLK1-209ENST00000472679 SOCS4Q8WXH5 440 aa6.78□□□□□ -1.32
CLK1-209ENST00000472679 GDF15Q99988 308 aa6.78□□□□□ -1.32
CLK1-209ENST00000472679 SYNPO2LQ9H987 977 aa6.78□□□□□ -1.32
CLK1-209ENST00000472679 TRMT13Q9NUP7 481 aaKnown RBP6.78□□□□□ -1.32
CLK1-209ENST00000472679 MAN2B2Q9Y2E5 1009 aa6.78□□□□□ -1.32
CLK1-209ENST00000472679 AQP7P3A6NL99 342 aa6.77□□□□□ -1.33
CLK1-209ENST00000472679 URI1O94763 535 aaPredicted RBP6.77□□□□□ -1.33
CLK1-209ENST00000472679 RHOBTB3O94955 611 aa6.77□□□□□ -1.33
CLK1-209ENST00000472679 NDST3O95803 873 aa6.77□□□□□ -1.33
CLK1-209ENST00000472679 NTSR1P30989 418 aa6.77□□□□□ -1.33
CLK1-209ENST00000472679 PRKAR1BP31321 381 aa6.77□□□□□ -1.33
CLK1-209ENST00000472679 TEDDM1Q5T9Z0 273 aa6.77□□□□□ -1.33
CLK1-209ENST00000472679 CRTC1Q6UUV9 634 aa6.77□□□□□ -1.33
CLK1-209ENST00000472679 TOGARAM2Q6ZUX3 1019 aa6.77□□□□□ -1.33
CLK1-209ENST00000472679 BEND5Q7L4P6 421 aa6.77□□□□□ -1.33
CLK1-209ENST00000472679 KRT28Q7Z3Y7 464 aa6.77□□□□□ -1.33
CLK1-209ENST00000472679 CAND1Q86VP6 1230 aaKnown RBP6.77□□□□□ -1.33
CLK1-209ENST00000472679 XAGE5Q8WWM1 108 aa6.77□□□□□ -1.33
CLK1-209ENST00000472679 SLC9A6Q92581 669 aa6.77□□□□□ -1.33
CLK1-209ENST00000472679 MRIQ9BWK5 157 aa6.77□□□□□ -1.33
CLK1-209ENST00000472679 FAM83DQ9H4H8 585 aa6.77□□□□□ -1.33
CLK1-209ENST00000472679 HEYLQ9NQ87 328 aaPredicted RBP6.77□□□□□ -1.33
CLK1-209ENST00000472679 ARHGEF3Q9NR81 526 aa6.77□□□□□ -1.33
CLK1-209ENST00000472679 IL17RBQ9NRM6 502 aa6.77□□□□□ -1.33
CLK1-209ENST00000472679 SERTAD4Q9NUC0 356 aa6.77□□□□□ -1.33
CLK1-209ENST00000472679 HPSEQ9Y251 543 aa6.77□□□□□ -1.33
CLK1-209ENST00000472679 NXPH3O95157 252 aa6.76□□□□□ -1.33
CLK1-209ENST00000472679 HTR3AP46098 478 aa6.76□□□□□ -1.33
CLK1-209ENST00000472679 HSPA7P48741 367 aa6.76□□□□□ -1.33
CLK1-209ENST00000472679 BRD3Q15059 726 aa6.76□□□□□ -1.33
CLK1-209ENST00000472679 MPEG1Q2M385 716 aa6.76□□□□□ -1.33
CLK1-209ENST00000472679 PRR16Q569H4 304 aa6.76□□□□□ -1.33
CLK1-209ENST00000472679 DPY19L3Q6ZPD9 716 aa6.76□□□□□ -1.33
CLK1-209ENST00000472679 ZNF551Q7Z340 670 aaPredicted RBP6.76□□□□□ -1.33
CLK1-209ENST00000472679 SIMC1Q8NDZ2 872 aa6.76□□□□□ -1.33
CLK1-209ENST00000472679 SMCR8Q8TEV9 937 aaPredicted RBP6.76□□□□□ -1.33
CLK1-209ENST00000472679 DRG1Q9Y295 367 aaKnown RBP6.76□□□□□ -1.33
CLK1-209ENST00000472679 DAAM1Q9Y4D1 1078 aa6.76□□□□□ -1.33
CLK1-209ENST00000472679 CCDC151A5D8V7 595 aa6.75□□□□□ -1.33
CLK1-209ENST00000472679 EBLN1P0CF75 366 aa6.75□□□□□ -1.33
CLK1-209ENST00000472679 MYL4P12829 197 aa6.75□□□□□ -1.33
CLK1-209ENST00000472679 EEF1GP26641 437 aaKnown RBP6.75□□□□□ -1.33
CLK1-209ENST00000472679 GABRB3P28472 473 aa6.75□□□□□ -1.33
CLK1-209ENST00000472679 ATICP31939 592 aa6.75□□□□□ -1.33
CLK1-209ENST00000472679 ALDH9A1P49189 494 aa6.75□□□□□ -1.33
CLK1-209ENST00000472679 PTH2RP49190 550 aa6.75□□□□□ -1.33
CLK1-209ENST00000472679 PGDP52209 483 aa6.75□□□□□ -1.33
CLK1-209ENST00000472679 PDE1AP54750 535 aa6.75□□□□□ -1.33
CLK1-209ENST00000472679 TIAL1Q01085 375 aaKnown RBP eCLIP6.75□□□□□ -1.33
CLK1-209ENST00000472679 KIAA0408Q6ZU52 694 aa6.75□□□□□ -1.33
CLK1-209ENST00000472679 USP49Q70CQ1 688 aa6.75□□□□□ -1.33
CLK1-209ENST00000472679 SAMD3Q8N6K7 520 aa6.75□□□□□ -1.33
CLK1-209ENST00000472679 ZNF566Q969W8 418 aa6.75□□□□□ -1.33
CLK1-209ENST00000472679 MAGEB5Q9BZ81 275 aa6.75□□□□□ -1.33
CLK1-209ENST00000472679 DLL3Q9NYJ7 618 aa6.75□□□□□ -1.33
CLK1-209ENST00000472679 TAGLN3Q9UI15 199 aa6.75□□□□□ -1.33
CLK1-209ENST00000472679 VPS51Q9UID3 782 aa6.75□□□□□ -1.33
CLK1-209ENST00000472679 CDC23Q9UJX2 597 aa6.75□□□□□ -1.33
CLK1-209ENST00000472679 SH2B3Q9UQQ2 575 aa6.75□□□□□ -1.33
CLK1-209ENST00000472679 KIAA0355O15063 1070 aa6.74□□□□□ -1.33
CLK1-209ENST00000472679 KCNQ3O43525 872 aa6.74□□□□□ -1.33
CLK1-209ENST00000472679 TTLL1O95922 423 aa6.74□□□□□ -1.33
CLK1-209ENST00000472679 ONECUT2O95948 504 aa6.74□□□□□ -1.33
CLK1-209ENST00000472679 EPHA3P29320 983 aa6.74□□□□□ -1.33
CLK1-209ENST00000472679 CYP2C18P33260 490 aa6.74□□□□□ -1.33
CLK1-209ENST00000472679 CLK3P49761 638 aaKnown RBP6.74□□□□□ -1.33
CLK1-209ENST00000472679 GATMP50440 423 aa6.74□□□□□ -1.33
CLK1-209ENST00000472679 COPAP53621 1224 aa6.74□□□□□ -1.33
CLK1-209ENST00000472679 FHL3Q13643 280 aa6.74□□□□□ -1.33
CLK1-209ENST00000472679 CYP1B1Q16678 543 aa6.74□□□□□ -1.33
CLK1-209ENST00000472679 PLAC9Q5JTB6 97 aa6.74□□□□□ -1.33
CLK1-209ENST00000472679 DGKKQ5KSL6 1271 aa6.74□□□□□ -1.33
CLK1-209ENST00000472679 ZNF362Q5T0B9 420 aaPredicted RBP6.74□□□□□ -1.33
CLK1-209ENST00000472679 RAP1GAP2Q684P5 730 aa6.74□□□□□ -1.33
CLK1-209ENST00000472679 SPICE1Q8N0Z3 855 aa6.74□□□□□ -1.33
CLK1-209ENST00000472679 LRRC71Q8N4P6 559 aa6.74□□□□□ -1.33
CLK1-209ENST00000472679 FANCBQ8NB91 859 aa6.74□□□□□ -1.33
CLK1-209ENST00000472679 GLIS1Q8NBF1 620 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms