RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 C2orf16Q68DN1 1984 aa15□□□□□ -0.01
BRCA1-211ENST00000472490 ZNF840PA6NDX5 716 aa15□□□□□ -0.01
BRCA1-211ENST00000472490 LGALS16A8MUM7 142 aa15□□□□□ -0.01
BRCA1-211ENST00000472490 GOLGA6L19H0YKK7 550 aa15□□□□□ -0.01
BRCA1-211ENST00000472490 O00370 1275 aa15□□□□□ -0.01
BRCA1-211ENST00000472490 USP17L7P0C7H9 530 aa15□□□□□ -0.01
BRCA1-211ENST00000472490 SETSIPP0DME0 302 aa15□□□□□ -0.01
BRCA1-211ENST00000472490 PSMC3P17980 439 aa15□□□□□ -0.01
BRCA1-211ENST00000472490 USP8P40818 1118 aa15□□□□□ -0.01
BRCA1-211ENST00000472490 ZNF132P52740 706 aa15□□□□□ -0.01
BRCA1-211ENST00000472490 USP46P62068 366 aa15□□□□□ -0.01
BRCA1-211ENST00000472490 PTK2Q05397 1052 aa15□□□□□ -0.01
BRCA1-211ENST00000472490 GOLGA7BQ2TAP0 167 aa15□□□□□ -0.01
BRCA1-211ENST00000472490 STXBP5Q5T5C0 1151 aa15□□□□□ -0.01
BRCA1-211ENST00000472490 KLHDC7AQ5VTJ3 777 aa15□□□□□ -0.01
BRCA1-211ENST00000472490 TXNDC8Q6A555 127 aa15□□□□□ -0.01
BRCA1-211ENST00000472490 TANGO2Q6ICL3 276 aa15□□□□□ -0.01
BRCA1-211ENST00000472490 YAF2Q8IY57 180 aa15□□□□□ -0.01
BRCA1-211ENST00000472490 CELF5Q8N6W0 485 aaKnown RBP15□□□□□ -0.01
BRCA1-211ENST00000472490 SCAMP5Q8TAC9 235 aa15□□□□□ -0.01
BRCA1-211ENST00000472490 SHC3Q92529 594 aa15□□□□□ -0.01
BRCA1-211ENST00000472490 PCMTD1Q96MG8 357 aaPredicted RBP15□□□□□ -0.01
BRCA1-211ENST00000472490 KXD1Q9BQD3 176 aa15□□□□□ -0.01
BRCA1-211ENST00000472490 TRMT61BQ9BVS5 477 aaKnown RBP15□□□□□ -0.01
BRCA1-211ENST00000472490 KIF9Q9HAQ2 790 aa15□□□□□ -0.01
BRCA1-211ENST00000472490 TRPC7Q9HCX4 862 aa15□□□□□ -0.01
BRCA1-211ENST00000472490 PLCB1Q9NQ66 1216 aa15□□□□□ -0.01
BRCA1-211ENST00000472490 SLC2A4RGQ9NR83 387 aa15□□□□□ -0.01
BRCA1-211ENST00000472490 TLR8Q9NR97 1041 aaKnown RBP15□□□□□ -0.01
BRCA1-211ENST00000472490 TDP1Q9NUW8 608 aa15□□□□□ -0.01
BRCA1-211ENST00000472490 FAM92AA1XBS5 289 aa14.99□□□□□ -0.01
BRCA1-211ENST00000472490 RNF225M0QZC1 329 aaPredicted RBP14.99□□□□□ -0.01
BRCA1-211ENST00000472490 XPO1O14980 1071 aaKnown RBP14.99□□□□□ -0.01
BRCA1-211ENST00000472490 TADA3O75528 432 aa14.99□□□□□ -0.01
BRCA1-211ENST00000472490 ABL1P00519 1130 aa14.99□□□□□ -0.01
BRCA1-211ENST00000472490 CKMP06732 381 aa14.99□□□□□ -0.01
BRCA1-211ENST00000472490 UCHL3P15374 230 aa14.99□□□□□ -0.01
BRCA1-211ENST00000472490 HDCP19113 662 aa14.99□□□□□ -0.01
BRCA1-211ENST00000472490 FCARP24071 287 aa14.99□□□□□ -0.01
BRCA1-211ENST00000472490 GNA15P30679 374 aa14.99□□□□□ -0.01
BRCA1-211ENST00000472490 TUBP50607 506 aa14.99□□□□□ -0.01
BRCA1-211ENST00000472490 BPIFB4P59827 614 aa14.99□□□□□ -0.01
BRCA1-211ENST00000472490 UBXN1Q04323 297 aa14.99□□□□□ -0.01
BRCA1-211ENST00000472490 KCNMA1Q12791 1236 aa14.99□□□□□ -0.01
BRCA1-211ENST00000472490 RAPGEF1Q13905 1077 aa14.99□□□□□ -0.01
BRCA1-211ENST00000472490 ZNF268Q14587 947 aaPredicted RBP14.99□□□□□ -0.01
BRCA1-211ENST00000472490 MEA1Q16626 185 aa14.99□□□□□ -0.01
BRCA1-211ENST00000472490 SNX30Q5VWJ9 437 aa14.99□□□□□ -0.01
BRCA1-211ENST00000472490 GJB7Q6PEY0 223 aa14.99□□□□□ -0.01
BRCA1-211ENST00000472490 TRIM67Q6ZTA4 783 aa14.99□□□□□ -0.01
BRCA1-211ENST00000472490 MFSD6LQ8IWD5 586 aa14.99□□□□□ -0.01
BRCA1-211ENST00000472490 LSM14BQ9BX40 385 aaKnown RBP14.99□□□□□ -0.01
BRCA1-211ENST00000472490 EPHX3Q9H6B9 360 aa14.99□□□□□ -0.01
BRCA1-211ENST00000472490 SIX2Q9NPC8 291 aa14.99□□□□□ -0.01
BRCA1-211ENST00000472490 THG1LQ9NWX6 298 aaKnown RBP14.99□□□□□ -0.01
BRCA1-211ENST00000472490 WNT16Q9UBV4 365 aa14.99□□□□□ -0.01
BRCA1-211ENST00000472490 FBXL21Q9UKT6 434 aa14.99□□□□□ -0.01
BRCA1-211ENST00000472490 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.99□□□□□ -0.01
BRCA1-211ENST00000472490 SCML2Q9UQR0 700 aa14.99□□□□□ -0.01
BRCA1-211ENST00000472490 HEPACAM2A8MVW5 462 aa14.98□□□□□ -0.01
BRCA1-211ENST00000472490 HHLA1C9JL84 531 aa14.98□□□□□ -0.01
BRCA1-211ENST00000472490 NRG2O14511 850 aaPredicted RBP14.98□□□□□ -0.01
BRCA1-211ENST00000472490 VIPR2P41587 438 aa14.98□□□□□ -0.01
BRCA1-211ENST00000472490 PLA2G4AP47712 749 aa14.98□□□□□ -0.01
BRCA1-211ENST00000472490 PSEN1P49768 467 aa14.98□□□□□ -0.01
BRCA1-211ENST00000472490 KIF11P52732 1056 aa14.98□□□□□ -0.01
BRCA1-211ENST00000472490 IQCB1Q15051 598 aa14.98□□□□□ -0.01
BRCA1-211ENST00000472490 HECTD3Q5T447 861 aa14.98□□□□□ -0.01
BRCA1-211ENST00000472490 VITQ6UXI7 678 aa14.98□□□□□ -0.01
BRCA1-211ENST00000472490 TADA2BQ86TJ2 420 aa14.98□□□□□ -0.01
BRCA1-211ENST00000472490 PIGZQ86VD9 579 aa14.98□□□□□ -0.01
BRCA1-211ENST00000472490 TTC30AQ86WT1 665 aa14.98□□□□□ -0.01
BRCA1-211ENST00000472490 ARHGAP18Q8N392 663 aa14.98□□□□□ -0.01
BRCA1-211ENST00000472490 BPIFB1Q8TDL5 484 aa14.98□□□□□ -0.01
BRCA1-211ENST00000472490 IRF7Q92985 503 aa14.98□□□□□ -0.01
BRCA1-211ENST00000472490 RPP25Q9BUL9 199 aaKnown RBP14.98□□□□□ -0.01
BRCA1-211ENST00000472490 NACA2Q9H009 215 aa14.98□□□□□ -0.01
BRCA1-211ENST00000472490 HSD3B7Q9H2F3 369 aa14.98□□□□□ -0.01
BRCA1-211ENST00000472490 LRRC4Q9HBW1 653 aa14.98□□□□□ -0.01
BRCA1-211ENST00000472490 CBX8Q9HC52 389 aa14.98□□□□□ -0.01
BRCA1-211ENST00000472490 CHORDC1Q9UHD1 332 aaPredicted RBP14.98□□□□□ -0.01
BRCA1-211ENST00000472490 M0QYV0 167 aa14.97□□□□□ -0.01
BRCA1-211ENST00000472490 ZNF263O14978 683 aa14.97□□□□□ -0.01
BRCA1-211ENST00000472490 THAP12O43422 761 aa14.97□□□□□ -0.01
BRCA1-211ENST00000472490 GPR37L1O60883 481 aa14.97□□□□□ -0.01
BRCA1-211ENST00000472490 SERPINC1P01008 464 aa14.97□□□□□ -0.01
BRCA1-211ENST00000472490 ATP1A3P13637 1013 aa14.97□□□□□ -0.01
BRCA1-211ENST00000472490 BRD2P25440 801 aaKnown RBP14.97□□□□□ -0.01
BRCA1-211ENST00000472490 GPC5P78333 572 aa14.97□□□□□ -0.01
BRCA1-211ENST00000472490 PLCB2Q00722 1185 aa14.97□□□□□ -0.01
BRCA1-211ENST00000472490 APBA1Q02410 837 aa14.97□□□□□ -0.01
BRCA1-211ENST00000472490 PDE4CQ08493 712 aa14.97□□□□□ -0.01
BRCA1-211ENST00000472490 DRAP1Q14919 205 aaPredicted RBP14.97□□□□□ -0.01
BRCA1-211ENST00000472490 TMEM31Q5JXX7 168 aa14.97□□□□□ -0.01
BRCA1-211ENST00000472490 CC2D1AQ6P1N0 951 aaPredicted RBP14.97□□□□□ -0.01
BRCA1-211ENST00000472490 CCDC186Q7Z3E2 898 aa14.97□□□□□ -0.01
BRCA1-211ENST00000472490 SIX6OS1Q8N1H7 587 aa14.97□□□□□ -0.01
BRCA1-211ENST00000472490 ARL14EPQ8N8R7 260 aaPredicted RBP14.97□□□□□ -0.01
BRCA1-211ENST00000472490 ST13P5Q8NFI4 369 aaPredicted RBP14.97□□□□□ -0.01
BRCA1-211ENST00000472490 UBA3Q8TBC4 463 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms