RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 RNF38Q9H0F5 515 aa20.35■□□□□ 0.85
SORT1-203ENST00000471996 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.35■□□□□ 0.85
SORT1-203ENST00000471996 CALCOCO1Q9P1Z2 691 aa20.35■□□□□ 0.85
SORT1-203ENST00000471996 AGAP1Q9UPQ3 857 aa20.35■□□□□ 0.85
SORT1-203ENST00000471996 APOBEC2Q9Y235 224 aaKnown RBP20.35■□□□□ 0.85
SORT1-203ENST00000471996 FLNBO75369 2602 aaKnown RBP20.35■□□□□ 0.85
SORT1-203ENST00000471996 MYH11P35749 1972 aa20.34■□□□□ 0.85
SORT1-203ENST00000471996 PLXND1Q9Y4D7 1925 aa20.34■□□□□ 0.85
SORT1-203ENST00000471996 IGHV1OR15-9A0A0B4J2B8 117 aa20.34■□□□□ 0.85
SORT1-203ENST00000471996 IL18RAPO95256 599 aa20.34■□□□□ 0.85
SORT1-203ENST00000471996 ADH5P11766 374 aa20.34■□□□□ 0.85
SORT1-203ENST00000471996 PCSK1P29120 753 aa20.34■□□□□ 0.85
SORT1-203ENST00000471996 LHX1P48742 406 aa20.34■□□□□ 0.85
SORT1-203ENST00000471996 FAM171BQ6P995 826 aa20.34■□□□□ 0.85
SORT1-203ENST00000471996 TRMT11Q7Z4G4 463 aaKnown RBP20.34■□□□□ 0.85
SORT1-203ENST00000471996 GLRX5Q86SX6 157 aa20.34■□□□□ 0.85
SORT1-203ENST00000471996 GPBP1Q86WP2 473 aa20.34■□□□□ 0.85
SORT1-203ENST00000471996 CCDC83Q8IWF9 413 aa20.34■□□□□ 0.85
SORT1-203ENST00000471996 PHTF2Q8N3S3 785 aa20.34■□□□□ 0.85
SORT1-203ENST00000471996 TRIML1Q8N9V2 468 aa20.34■□□□□ 0.85
SORT1-203ENST00000471996 ADAM32Q8TC27 787 aa20.34■□□□□ 0.85
SORT1-203ENST00000471996 CEP295NLQ96MC4 621 aa20.34■□□□□ 0.85
SORT1-203ENST00000471996 DKK4Q9UBT3 224 aa20.34■□□□□ 0.85
SORT1-203ENST00000471996 CPQQ9Y646 472 aa20.34■□□□□ 0.85
SORT1-203ENST00000471996 ADAMTS9Q9P2N4 1935 aa20.33■□□□□ 0.85
SORT1-203ENST00000471996 ZNF840PA6NDX5 716 aa20.33■□□□□ 0.85
SORT1-203ENST00000471996 GABRDO14764 452 aa20.33■□□□□ 0.85
SORT1-203ENST00000471996 SCAMP3O14828 347 aaKnown RBP20.33■□□□□ 0.85
SORT1-203ENST00000471996 HCRTO43612 131 aa20.33■□□□□ 0.85
SORT1-203ENST00000471996 OLFM2O95897 454 aa20.33■□□□□ 0.85
SORT1-203ENST00000471996 ITGB3P05106 788 aa20.33■□□□□ 0.85
SORT1-203ENST00000471996 USP46P62068 366 aa20.33■□□□□ 0.85
SORT1-203ENST00000471996 PLEKHG6Q3KR16 790 aa20.33■□□□□ 0.85
SORT1-203ENST00000471996 C4orf50Q6ZRC1 276 aa20.33■□□□□ 0.85
SORT1-203ENST00000471996 DENND5BQ6ZUT9 1274 aa20.33■□□□□ 0.85
SORT1-203ENST00000471996 TOGARAM2Q6ZUX3 1019 aa20.33■□□□□ 0.85
SORT1-203ENST00000471996 SLCO6A1Q86UG4 719 aa20.33■□□□□ 0.85
SORT1-203ENST00000471996 ZNF513Q8N8E2 541 aaPredicted RBP20.33■□□□□ 0.85
SORT1-203ENST00000471996 HSPA12BQ96MM6 686 aa20.33■□□□□ 0.85
SORT1-203ENST00000471996 FAM124BQ9H5Z6 455 aaPredicted RBP20.33■□□□□ 0.85
SORT1-203ENST00000471996 SMPD4Q9NXE4 827 aa20.33■□□□□ 0.85
SORT1-203ENST00000471996 GDAP2Q9NXN4 497 aa20.33■□□□□ 0.85
SORT1-203ENST00000471996 CACNA2D2Q9NY47 1150 aa20.33■□□□□ 0.85
SORT1-203ENST00000471996 TBC1D3BA6NDS4 549 aa20.32■□□□□ 0.84
SORT1-203ENST00000471996 CBFA2T3O75081 653 aa20.32■□□□□ 0.84
SORT1-203ENST00000471996 ZNF217O75362 1048 aa20.32■□□□□ 0.84
SORT1-203ENST00000471996 HMGN5P82970 282 aaKnown RBP20.32■□□□□ 0.84
SORT1-203ENST00000471996 TFAMQ00059 246 aaKnown RBP20.32■□□□□ 0.84
SORT1-203ENST00000471996 VSTM1Q6UX27 236 aa20.32■□□□□ 0.84
SORT1-203ENST00000471996 ADGRF2Q8IZF7 708 aa20.32■□□□□ 0.84
SORT1-203ENST00000471996 TOP6BLQ8N6T0 577 aa20.32■□□□□ 0.84
SORT1-203ENST00000471996 LRRC52Q8N7C0 313 aa20.32■□□□□ 0.84
SORT1-203ENST00000471996 C1orf127Q8N9H9 656 aa20.32■□□□□ 0.84
SORT1-203ENST00000471996 ZNF419Q96HQ0 510 aaPredicted RBP20.32■□□□□ 0.84
SORT1-203ENST00000471996 TTLL2Q9BWV7 592 aa20.32■□□□□ 0.84
SORT1-203ENST00000471996 KIAA1522Q9P206 1035 aaPredicted RBP20.32■□□□□ 0.84
SORT1-203ENST00000471996 CFAP97Q9P2B7 532 aa20.32■□□□□ 0.84
SORT1-203ENST00000471996 MAGEC2Q9UBF1 373 aaPredicted RBP20.32■□□□□ 0.84
SORT1-203ENST00000471996 SUSD2Q9UGT4 822 aa20.32■□□□□ 0.84
SORT1-203ENST00000471996 SNX9Q9Y5X1 595 aa20.32■□□□□ 0.84
SORT1-203ENST00000471996 ANAPC1Q9H1A4 1944 aa20.31■□□□□ 0.84
SORT1-203ENST00000471996 HOXB2P14652 356 aa20.31■□□□□ 0.84
SORT1-203ENST00000471996 PPP3CCP48454 512 aa20.31■□□□□ 0.84
SORT1-203ENST00000471996 WNT7BP56706 349 aa20.31■□□□□ 0.84
SORT1-203ENST00000471996 LY6G5CQ5SRR4 150 aa20.31■□□□□ 0.84
SORT1-203ENST00000471996 RGL4Q8IZJ4 473 aa20.31■□□□□ 0.84
SORT1-203ENST00000471996 FAM184AQ8NB25 1140 aa20.31■□□□□ 0.84
SORT1-203ENST00000471996 CXorf38Q8TB03 319 aa20.31■□□□□ 0.84
SORT1-203ENST00000471996 POMGNT1Q8WZA1 660 aa20.31■□□□□ 0.84
SORT1-203ENST00000471996 ZHX3Q9H4I2 956 aa20.31■□□□□ 0.84
SORT1-203ENST00000471996 ASH1LQ9NR48 2969 aaKnown RBP20.31■□□□□ 0.84
SORT1-203ENST00000471996 EHD2Q9NZN4 543 aa20.31■□□□□ 0.84
SORT1-203ENST00000471996 TBC1D14Q9P2M4 693 aa20.31■□□□□ 0.84
SORT1-203ENST00000471996 PCOLCE2Q9UKZ9 415 aa20.31■□□□□ 0.84
SORT1-203ENST00000471996 TCHHQ07283 1943 aa20.31■□□□□ 0.84
SORT1-203ENST00000471996 APC2O95996 2303 aa20.3■□□□□ 0.84
SORT1-203ENST00000471996 A0A1W2PQF6 199 aa20.3■□□□□ 0.84
SORT1-203ENST00000471996 VWA3AA6NCI4 1184 aa20.3■□□□□ 0.84
SORT1-203ENST00000471996 ATP2C2O75185 946 aa20.3■□□□□ 0.84
SORT1-203ENST00000471996 OAS1P00973 400 aaKnown RBP20.3■□□□□ 0.84
SORT1-203ENST00000471996 PLCG1P19174 1290 aa20.3■□□□□ 0.84
SORT1-203ENST00000471996 BDNFP23560 247 aa20.3■□□□□ 0.84
SORT1-203ENST00000471996 ADSSP30520 456 aa20.3■□□□□ 0.84
SORT1-203ENST00000471996 GRIK1P39086 918 aa20.3■□□□□ 0.84
SORT1-203ENST00000471996 GAD2Q05329 585 aa20.3■□□□□ 0.84
SORT1-203ENST00000471996 DHX8Q14562 1220 aaKnown RBP20.3■□□□□ 0.84
SORT1-203ENST00000471996 PREPLQ4J6C6 727 aaPredicted RBP20.3■□□□□ 0.84
SORT1-203ENST00000471996 SCARA3Q6AZY7 606 aa20.3■□□□□ 0.84
SORT1-203ENST00000471996 TMPRSS7Q7RTY8 843 aa20.3■□□□□ 0.84
SORT1-203ENST00000471996 DDX42Q86XP3 938 aaKnown RBP eCLIP20.3■□□□□ 0.84
SORT1-203ENST00000471996 ETFBKMTQ8IXQ9 262 aa20.3■□□□□ 0.84
SORT1-203ENST00000471996 ZDHHC5Q9C0B5 715 aa20.3■□□□□ 0.84
SORT1-203ENST00000471996 HCN2Q9UL51 889 aa20.3■□□□□ 0.84
SORT1-203ENST00000471996 CYP8B1Q9UNU6 501 aa20.3■□□□□ 0.84
SORT1-203ENST00000471996 ACACAQ13085 2346 aa20.3■□□□□ 0.84
SORT1-203ENST00000471996 PLXNB3Q9ULL4 1909 aa20.29■□□□□ 0.84
SORT1-203ENST00000471996 HELZ2Q9BYK8 2649 aaKnown RBP20.29■□□□□ 0.84
SORT1-203ENST00000471996 ZBTB24O43167 697 aaPredicted RBP20.29■□□□□ 0.84
SORT1-203ENST00000471996 KRT18P05783 430 aaKnown RBP20.29■□□□□ 0.84
SORT1-203ENST00000471996 GNSP15586 552 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms