RNA–Protein interactions for RNA: ENST00000471894.1

PUM1-208, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-208	ENST00000471894	TTC9B	Q8N6N2	239 aa		11.1	□□□□□ -0.63
PUM1-208	ENST00000471894	SLC35G2	Q8TBE7	412 aa		11.1	□□□□□ -0.63
PUM1-208	ENST00000471894	ARHGEF26	Q96DR7	871 aa		11.1	□□□□□ -0.63
PUM1-208	ENST00000471894	C8orf48	Q96LL4	319 aa		11.1	□□□□□ -0.63
PUM1-208	ENST00000471894	CYP4F11	Q9HBI6	524 aa		11.1	□□□□□ -0.63
PUM1-208	ENST00000471894	AVEN	Q9NQS1	362 aa	Predicted RBP	11.1	□□□□□ -0.63
PUM1-208	ENST00000471894	TMEM30A	Q9NV96	361 aa		11.1	□□□□□ -0.63
PUM1-208	ENST00000471894	PARVA	Q9NVD7	372 aa		11.1	□□□□□ -0.63
PUM1-208	ENST00000471894	CTTNBP2NL	Q9P2B4	639 aa		11.1	□□□□□ -0.63
PUM1-208	ENST00000471894	TJP2	Q9UDY2	1190 aa		11.1	□□□□□ -0.63
PUM1-208	ENST00000471894	CHORDC1	Q9UHD1	332 aa	Predicted RBP	11.1	□□□□□ -0.63
PUM1-208	ENST00000471894	MAFF	Q9ULX9	164 aa		11.1	□□□□□ -0.63
PUM1-208	ENST00000471894	PAXBP1	Q9Y5B6	917 aa		11.1	□□□□□ -0.63
PUM1-208	ENST00000471894	PCDHGC5	Q9Y5F6	944 aa		11.1	□□□□□ -0.63
PUM1-208	ENST00000471894		A0A0A6YYK5	440 aa	Predicted RBP	11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	MACROD2	A1Z1Q3	448 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	BTNL10	A8MVZ5	291 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	ESPN	B1AK53	854 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	HHLA1	C9JL84	531 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	GOLGA8S	H3BPF8	625 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	PRRG1	O14668	218 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	BUB1	O43683	1085 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	GABBR2	O75899	941 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	SOAT2	O75908	522 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	SEC24A	O95486	1093 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	SPATA31D3	P0C874	917 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	IRS1	P35568	1242 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	ALDH1A3	P47895	512 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	RPL34	P49207	117 aa	Known RBP	11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	GPR15	P49685	360 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	TKTL1	P51854	596 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	ADIG	Q0VDE8	80 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	CAMK1	Q14012	370 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	IFI16	Q16666	785 aa	Known RBP	11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	SDHAF4	Q5VUM1	108 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	LLGL2	Q6P1M3	1020 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	DNAJC24	Q6P3W2	148 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	SPATA31D4	Q6ZUB0	917 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	ZDHHC17	Q8IUH5	632 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	RHOT2	Q8IXI1	618 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	NUP93	Q8N1F7	819 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	SIX6OS1	Q8N1H7	587 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	RFFL	Q8WZ73	363 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	SELENOO	Q9BVL4	669 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	NUP85	Q9BW27	656 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	LMAN2L	Q9H0V9	348 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	CRISPLD1	Q9H336	500 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	MRPL47	Q9HD33	250 aa	Known RBP	11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	PNPLA8	Q9NP80	782 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	HSFX1	Q9UBD0	423 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	SCIN	Q9Y6U3	715 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	LAMA2	P24043	3122 aa	Known RBP	11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	NCAN	O14594	1321 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894	MYO9B	Q13459	2157 aa		11.09	□□□□□ -0.63
PUM1-208	ENST00000471894		A0A1W2PPC1	479 aa		11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	SIGLEC16	A6NMB1	481 aa		11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	RFXAP	O00287	272 aa		11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	PAPSS1	O43252	624 aa	Predicted RBP	11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	TGM5	O43548	720 aa		11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	FBXO21	O94952	628 aa		11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	MOCS3	O95396	460 aa		11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	KRT3	P12035	628 aa		11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	RNASE9	P60153	205 aa	Known RBP	11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	SLC6A3	Q01959	620 aa		11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	IFRD2	Q12894	506 aa	Predicted RBP	11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	MAMLD1	Q13495	774 aa		11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	RAB41	Q5JT25	222 aa		11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	FAM102A	Q5T9C2	384 aa	Predicted RBP	11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	PLEKHA7	Q6IQ23	1121 aa		11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	DCUN1D2	Q6PH85	259 aa		11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	FAM183BP	Q6ZVS7	135 aa		11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	GPRIN1	Q7Z2K8	1008 aa		11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	TCEAL8	Q8IYN2	117 aa		11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	RNF10	Q8N5U6	811 aa	Known RBP	11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	C3orf20	Q8ND61	904 aa		11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	SCAMP5	Q8TAC9	235 aa		11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	FEZF2	Q8TBJ5	459 aa		11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	ZNF564	Q8TBZ8	553 aa	Predicted RBP	11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	GPR152	Q8TDT2	470 aa		11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	GIPC2	Q8TF65	315 aa		11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	GDPD5	Q8WTR4	605 aa		11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	MCRS1	Q96EZ8	462 aa		11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	SPATA17	Q96L03	361 aa		11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	OSGEP	Q9NPF4	335 aa		11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	CNGB3	Q9NQW8	809 aa		11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	UVRAG	Q9P2Y5	699 aa		11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	SALL4	Q9UJQ4	1053 aa		11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	COLQ	Q9Y215	455 aa	Predicted RBP	11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	MYO7A	Q13402	2215 aa		11.08	□□□□□ -0.64
PUM1-208	ENST00000471894	EPOP	A6NHQ4	379 aa		11.07	□□□□□ -0.64
PUM1-208	ENST00000471894	TNFRSF10B	O14763	440 aa		11.07	□□□□□ -0.64
PUM1-208	ENST00000471894	PER2	O15055	1255 aa		11.07	□□□□□ -0.64
PUM1-208	ENST00000471894	KIF5C	O60282	957 aa		11.07	□□□□□ -0.64
PUM1-208	ENST00000471894	RTN3	O95197	1032 aa	Predicted RBP	11.07	□□□□□ -0.64
PUM1-208	ENST00000471894	GJB6	O95452	261 aa		11.07	□□□□□ -0.64
PUM1-208	ENST00000471894	ZBED1	O96006	694 aa		11.07	□□□□□ -0.64
PUM1-208	ENST00000471894	GLUD1	P00367	558 aa		11.07	□□□□□ -0.64
PUM1-208	ENST00000471894	USP17L7	P0C7H9	530 aa		11.07	□□□□□ -0.64
PUM1-208	ENST00000471894	SLC5A3	P53794	718 aa		11.07	□□□□□ -0.64
PUM1-208	ENST00000471894	GSC	P56915	257 aa	Predicted RBP	11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms