RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 CILPO75339 1184 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 ZNF217O75362 1048 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 C1QL1O75973 258 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 NOL4O94818 638 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 FAM13AO94988 1023 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 CER1O95813 267 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 ITGB3P05106 788 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 PLCG1P19174 1290 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 NDUFV2P19404 249 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 BDNFP23560 247 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 POLR2BP30876 1174 aaKnown RBP7.36□□□□□ -1.23
HDAC1-204ENST00000471488 MATKP42679 507 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 TNFRSF4P43489 277 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 KIR2DL1P43626 348 aaPredicted RBP7.36□□□□□ -1.23
HDAC1-204ENST00000471488 FXR2P51116 673 aaKnown RBP eCLIP7.36□□□□□ -1.233e-7■■■□□ 15.4
HDAC1-204ENST00000471488 ANKRD1Q15327 319 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 ME3Q16798 604 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 GAB4Q2WGN9 574 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 TAF1BQ53T94 588 aaPredicted RBP7.36□□□□□ -1.23
HDAC1-204ENST00000471488 INTS6LQ5JSJ4 861 aaKnown RBP7.36□□□□□ -1.23
HDAC1-204ENST00000471488 PEAR1Q5VY43 1037 aaPredicted RBP7.36□□□□□ -1.23
HDAC1-204ENST00000471488 RHBDF2Q6PJF5 856 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 DHRS13Q6UX07 377 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 DTHD1Q6ZMT9 781 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 CENPQQ7L2Z9 268 aaPredicted RBP7.36□□□□□ -1.23
HDAC1-204ENST00000471488 HS2ST1Q7LGA3 356 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 CD302Q8IX05 232 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 ADGRG2Q8IZP9 1017 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 GALNT15Q8N3T1 639 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 PDCL2Q8N4E4 241 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 NSUN7Q8NE18 718 aaKnown RBP7.36□□□□□ -1.23
HDAC1-204ENST00000471488 RASSF8Q8NHQ8 419 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 SPIRE2Q8WWL2 714 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 FOXJ1Q92949 421 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 BHMTQ93088 406 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 GTF3C6Q969F1 213 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 TRMT2BQ96GJ1 504 aaKnown RBP7.36□□□□□ -1.23
HDAC1-204ENST00000471488 GPR174Q9BXC1 333 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 TM6SF1Q9BZW5 370 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 TM7SF3Q9NS93 570 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 GCNT4Q9P109 453 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 DEC1Q9P2X7 70 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 MAGEC2Q9UBF1 373 aaPredicted RBP7.36□□□□□ -1.23
HDAC1-204ENST00000471488 RAI2Q9Y5P3 530 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 SNX9Q9Y5X1 595 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 CEP192Q8TEP8 1941 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 ASH1LQ9NR48 2969 aaKnown RBP7.36□□□□□ -1.23
HDAC1-204ENST00000471488 OBSL1O75147 1896 aa7.36□□□□□ -1.23
HDAC1-204ENST00000471488 DENND4CQ5VZ89 1909 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 A0A1B0GTW7 788 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 ANO9A1A5B4 782 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 TISP43B9A030 160 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 J3QKU1 62 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 TRIM24O15164 1050 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 RRP8O43159 456 aaKnown RBP7.35□□□□□ -1.23
HDAC1-204ENST00000471488 ATP2C2O75185 946 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 TBCAO75347 108 aaKnown RBP7.35□□□□□ -1.23
HDAC1-204ENST00000471488 PDGFRBP09619 1106 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 PLA2G4BP0C869 781 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 NCAM1P13591 858 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 HLA-EP13747 358 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 PAX3P23760 479 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 GUCY2CP25092 1073 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 NTSR1P30989 418 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 EIF2S3P41091 472 aaKnown RBP7.35□□□□□ -1.23
HDAC1-204ENST00000471488 CLDN6P56747 220 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 USP46P62068 366 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 ZXDBP98169 803 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 IL9RQ01113 521 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 GAD2Q05329 585 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 HSF5Q4G112 596 aaPredicted RBP7.35□□□□□ -1.23
HDAC1-204ENST00000471488 EGFLAMQ63HQ2 1017 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 C4orf50Q6ZRC1 276 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 DENND5BQ6ZUT9 1274 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 TMPRSS7Q7RTY8 843 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 FAM124AQ86V42 546 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 GPBP1Q86WP2 473 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 SCUBE3Q8IX30 993 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 ADGRF2Q8IZF7 708 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 CSGALNACT2Q8N6G5 542 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 PDCD7Q8N8D1 485 aaKnown RBP7.35□□□□□ -1.23
HDAC1-204ENST00000471488 IPO4Q8TEX9 1081 aaKnown RBP7.35□□□□□ -1.23
HDAC1-204ENST00000471488 SCFD1Q8WVM8 642 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 POMGNT1Q8WZA1 660 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 MYLPFQ96A32 169 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 FAM84AQ96KN4 292 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 ACOX2Q99424 681 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 CDC6Q99741 560 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 ACBD6Q9BR61 282 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 NTPCRQ9BSD7 190 aaKnown RBP7.35□□□□□ -1.23
HDAC1-204ENST00000471488 TIPINQ9BVW5 301 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 RNF38Q9H0F5 515 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 DNAJC17Q9NVM6 304 aaKnown RBP7.35□□□□□ -1.23
HDAC1-204ENST00000471488 WDR70Q9NW82 654 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 CACNA2D2Q9NY47 1150 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 CPSF3Q9UKF6 684 aaKnown RBP7.35□□□□□ -1.23
HDAC1-204ENST00000471488 AGO2Q9UKV8 859 aaKnown RBP7.35□□□□□ -1.23
HDAC1-204ENST00000471488 L1RE1Q9UN81 338 aa7.35□□□□□ -1.23
HDAC1-204ENST00000471488 FNDC3AQ9Y2H6 1198 aaKnown RBP7.35□□□□□ -1.23
HDAC1-204ENST00000471488 DERAQ9Y315 318 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms