RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 TAF6P49848 677 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 KIF11P52732 1056 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 TAP1Q03518 808 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 ARID5AQ03989 594 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 GOLGA8FQ08AF8 430 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 GOLGA8DPQ0D2H9 430 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 TUSC3Q13454 348 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 IKBKEQ14164 716 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 SLC18A3Q16572 532 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 WDR72Q3MJ13 1102 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 C9orf57Q5W0N0 161 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 HGSNATQ68CP4 663 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 GJB7Q6PEY0 223 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 TRIM72Q6ZMU5 477 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 ZNF662Q6ZS27 426 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 DPH6Q7L8W6 267 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 NPAS4Q8IUM7 802 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 RNF169Q8NCN4 708 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 DBF4BQ8NFT6 615 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 SPATA18Q8TC71 538 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 SCLYQ96I15 445 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 KREMEN1Q96MU8 473 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 ZMAT2Q96NC0 199 aaKnown RBP7.06□□□□□ -1.28
VAMP3-202ENST00000470357 FAM193BQ96PV7 902 aaPredicted RBP7.06□□□□□ -1.28
VAMP3-202ENST00000470357 GAD1Q99259 594 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 CHP1Q99653 195 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 PI4K2AQ9BTU6 479 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 MRPL9Q9BYD2 267 aaKnown RBP7.06□□□□□ -1.28
VAMP3-202ENST00000470357 BCO2Q9BYV7 579 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 TSGA10Q9BZW7 698 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 HAUS4Q9H6D7 363 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 GDAP2Q9NXN4 497 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 ARHGAP20Q9P2F6 1191 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 INTUQ9ULD6 942 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 PPP2R2CQ9Y2T4 447 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 NUB1Q9Y5A7 615 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 PCDHB7Q9Y5E2 793 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 PCDHB4Q9Y5E5 795 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 FNDC1Q4ZHG4 1894 aaPredicted RBP7.06□□□□□ -1.28
VAMP3-202ENST00000470357 MYO15AQ9UKN7 3530 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 MYH10P35580 1976 aa7.06□□□□□ -1.28
VAMP3-202ENST00000470357 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.05□□□□□ -1.28
VAMP3-202ENST00000470357 KPNA7A9QM74 516 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 ENPP3O14638 875 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 PTGESO14684 152 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 MEFVO15553 781 aaPredicted RBP7.05□□□□□ -1.28
VAMP3-202ENST00000470357 MED7O43513 233 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 KRT86O43790 486 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 HUS1O60921 280 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 LRRN2O75325 713 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 RGS9O75916 674 aaPredicted RBP7.05□□□□□ -1.28
VAMP3-202ENST00000470357 BAIAP3O94812 1187 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 KIF4AO95239 1232 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 PDGFAP04085 211 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 PAEPP09466 180 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 GZMAP12544 262 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 TNFAIP3P21580 790 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 ASPAP45381 313 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 NRLP54845 237 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 GPLD1P80108 840 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 APBA1Q02410 837 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 NHLH1Q02575 133 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 PLAURQ03405 335 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 INCA1Q0VD86 236 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 KIF5AQ12840 1032 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 STILQ15468 1287 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 ARHGAP29Q52LW3 1261 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 NOMO2Q5JPE7 1267 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 GLRA4Q5JXX5 417 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 PERM1Q5SV97 790 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 TMCO4Q5TGY1 634 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 TTC39BQ5VTQ0 682 aaPredicted RBP7.05□□□□□ -1.28
VAMP3-202ENST00000470357 ALKBH2Q6NS38 261 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 RAD9BQ6WBX8 426 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 KIAA1328Q86T90 577 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 UNC93AQ86WB7 457 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 CCAR2Q8N163 923 aaKnown RBP7.05□□□□□ -1.28
VAMP3-202ENST00000470357 TMEM86AQ8N2M4 240 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 RBBP8NLQ8NC74 664 aaPredicted RBP7.05□□□□□ -1.28
VAMP3-202ENST00000470357 CXorf38Q8TB03 319 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 UBE2Q2Q8WVN8 375 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 AGPAT1Q99943 283 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.05□□□□□ -1.28
VAMP3-202ENST00000470357 GPR88Q9GZN0 384 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 APOBEC3GQ9HC16 384 aaKnown RBP7.05□□□□□ -1.28
VAMP3-202ENST00000470357 CISHQ9NSE2 258 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 MYO1AQ9UBC5 1043 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 TUBGCP4Q9UGJ1 667 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 DSEQ9UL01 958 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 PYCARDQ9ULZ3 195 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 BARX2Q9UMQ3 279 aaPredicted RBP7.05□□□□□ -1.28
VAMP3-202ENST00000470357 CEP83Q9Y592 693 aa7.05□□□□□ -1.28
VAMP3-202ENST00000470357 A6NHS1 94 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 PODXLO00592 558 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 CYP26A1O43174 497 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 TRAPPC3O43617 180 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 ICMTO60725 284 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 TACC1O75410 805 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 LSM8O95777 96 aaKnown RBP7.04□□□□□ -1.28
VAMP3-202ENST00000470357 AMHP03971 560 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms