RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 DSTYKQ6XUX3 929 aa8.84□□□□□ -0.99
LSM2-210ENST00000470086 PNMA5Q96PV4 448 aa8.84□□□□□ -0.99
LSM2-210ENST00000470086 MTMR9Q96QG7 549 aa8.84□□□□□ -0.99
LSM2-210ENST00000470086 GAREM1Q9H706 876 aa8.84□□□□□ -0.99
LSM2-210ENST00000470086 CPNE5Q9HCH3 593 aa8.84□□□□□ -0.99
LSM2-210ENST00000470086 TM7SF3Q9NS93 570 aa8.84□□□□□ -0.99
LSM2-210ENST00000470086 TEX51A0A1B0GUA7 166 aa8.83□□□□□ -1
LSM2-210ENST00000470086 LACTBL1A8MY62 500 aa8.83□□□□□ -1
LSM2-210ENST00000470086 KCNJ18B7U540 433 aa8.83□□□□□ -1
LSM2-210ENST00000470086 ALDH1A2O94788 518 aa8.83□□□□□ -1
LSM2-210ENST00000470086 NOL4O94818 638 aa8.83□□□□□ -1
LSM2-210ENST00000470086 CYP11A1P05108 521 aa8.83□□□□□ -1
LSM2-210ENST00000470086 SYPP08247 313 aa8.83□□□□□ -1
LSM2-210ENST00000470086 RPS6KB1P23443 525 aa8.83□□□□□ -1
LSM2-210ENST00000470086 DDX6P26196 483 aaKnown RBP eCLIP8.83□□□□□ -13e-8■■■■□ 20
LSM2-210ENST00000470086 MARCKSP29966 332 aaPredicted RBP8.83□□□□□ -1
LSM2-210ENST00000470086 GGCXP38435 758 aa8.83□□□□□ -1
LSM2-210ENST00000470086 PEX3P56589 373 aa8.83□□□□□ -1
LSM2-210ENST00000470086 WNT7BP56706 349 aa8.83□□□□□ -1
LSM2-210ENST00000470086 EVCP57679 992 aa8.83□□□□□ -1
LSM2-210ENST00000470086 LILRA4P59901 499 aa8.83□□□□□ -1
LSM2-210ENST00000470086 USP46P62068 366 aa8.83□□□□□ -1
LSM2-210ENST00000470086 CCDC173Q0VFZ6 552 aa8.83□□□□□ -1
LSM2-210ENST00000470086 NOLC1Q14978 699 aaKnown RBP eCLIP8.83□□□□□ -11e-7■□□□□ 11
LSM2-210ENST00000470086 DHCR24Q15392 516 aa8.83□□□□□ -1
LSM2-210ENST00000470086 ENOX2Q16206 610 aaKnown RBP8.83□□□□□ -1
LSM2-210ENST00000470086 CALCRLQ16602 461 aa8.83□□□□□ -1
LSM2-210ENST00000470086 COLEC12Q5KU26 742 aa8.83□□□□□ -1
LSM2-210ENST00000470086 DBX2Q6ZNG2 339 aa8.83□□□□□ -1
LSM2-210ENST00000470086 GPR155Q7Z3F1 870 aa8.83□□□□□ -1
LSM2-210ENST00000470086 USP37Q86T82 979 aa8.83□□□□□ -1
LSM2-210ENST00000470086 ERICH1Q86X53 443 aa8.83□□□□□ -1
LSM2-210ENST00000470086 SPACA3Q8IXA5 215 aa8.83□□□□□ -1
LSM2-210ENST00000470086 RGL4Q8IZJ4 473 aa8.83□□□□□ -1
LSM2-210ENST00000470086 LSM14AQ8ND56 463 aaKnown RBP8.83□□□□□ -1
LSM2-210ENST00000470086 TTC9Q92623 222 aa8.83□□□□□ -1
LSM2-210ENST00000470086 THAP11Q96EK4 314 aa8.83□□□□□ -1
LSM2-210ENST00000470086 PKMYT1Q99640 499 aa8.83□□□□□ -1
LSM2-210ENST00000470086 RUSC1Q9BVN2 902 aa8.83□□□□□ -1
LSM2-210ENST00000470086 HSFX1Q9UBD0 423 aa8.83□□□□□ -1
LSM2-210ENST00000470086 PCDHA12Q9UN75 941 aa8.83□□□□□ -1
LSM2-210ENST00000470086 ARHGEF35A5YM69 484 aa8.82□□□□□ -1
LSM2-210ENST00000470086 LEFTY2O00292 366 aa8.82□□□□□ -1
LSM2-210ENST00000470086 KCNK3O14649 394 aa8.82□□□□□ -1
LSM2-210ENST00000470086 SLC16A4O15374 487 aa8.82□□□□□ -1
LSM2-210ENST00000470086 SLC28A2O43868 658 aa8.82□□□□□ -1
LSM2-210ENST00000470086 CTDNEP1O95476 244 aa8.82□□□□□ -1
LSM2-210ENST00000470086 HMGB1P09429 215 aaKnown RBP8.82□□□□□ -1
LSM2-210ENST00000470086 ODC1P11926 461 aa8.82□□□□□ -1
LSM2-210ENST00000470086 HLA-EP13747 358 aa8.82□□□□□ -1
LSM2-210ENST00000470086 HOXB2P14652 356 aa8.82□□□□□ -1
LSM2-210ENST00000470086 TCF3P15923 654 aa8.82□□□□□ -1
LSM2-210ENST00000470086 ACAT1P24752 427 aaKnown RBP8.82□□□□□ -1
LSM2-210ENST00000470086 CYP2F1P24903 491 aa8.82□□□□□ -1
LSM2-210ENST00000470086 ATP2C1P98194 919 aaPredicted RBP8.82□□□□□ -1
LSM2-210ENST00000470086 NFKB2Q00653 900 aa8.82□□□□□ -1
LSM2-210ENST00000470086 SSRP1Q08945 709 aaKnown RBP8.82□□□□□ -1
LSM2-210ENST00000470086 RESTQ13127 1097 aa8.82□□□□□ -1
LSM2-210ENST00000470086 DNAJC3Q13217 504 aa8.82□□□□□ -1
LSM2-210ENST00000470086 HLA-BQ31612 363 aa8.82□□□□□ -1
LSM2-210ENST00000470086 WSCD1Q658N2 575 aa8.82□□□□□ -1
LSM2-210ENST00000470086 LMBRD2Q68DH5 695 aaPredicted RBP8.82□□□□□ -1
LSM2-210ENST00000470086 JADE1Q6IE81 842 aa8.82□□□□□ -1
LSM2-210ENST00000470086 RHBDF2Q6PJF5 856 aa8.82□□□□□ -1
LSM2-210ENST00000470086 KCNK18Q7Z418 384 aa8.82□□□□□ -1
LSM2-210ENST00000470086 OSTM1Q86WC4 334 aa8.82□□□□□ -1
LSM2-210ENST00000470086 CACUL1Q86Y37 369 aa8.82□□□□□ -1
LSM2-210ENST00000470086 ETFBKMTQ8IXQ9 262 aa8.82□□□□□ -1
LSM2-210ENST00000470086 SLFN12Q8IYM2 578 aa8.82□□□□□ -1
LSM2-210ENST00000470086 NAT16Q8N8M0 369 aa8.82□□□□□ -1
LSM2-210ENST00000470086 C1orf216Q8TAB5 229 aa8.82□□□□□ -1
LSM2-210ENST00000470086 SNIP1Q8TAD8 396 aaKnown RBP8.82□□□□□ -1
LSM2-210ENST00000470086 MRPS31Q92665 395 aaKnown RBP8.82□□□□□ -1
LSM2-210ENST00000470086 KCNB2Q92953 911 aa8.82□□□□□ -1
LSM2-210ENST00000470086 ZNF419Q96HQ0 510 aaPredicted RBP8.82□□□□□ -1
LSM2-210ENST00000470086 MRPL4Q9BYD3 311 aaKnown RBP8.82□□□□□ -1
LSM2-210ENST00000470086 BHMT2Q9H2M3 363 aa8.82□□□□□ -1
LSM2-210ENST00000470086 TMEM206Q9H813 350 aa8.82□□□□□ -1
LSM2-210ENST00000470086 ARHGEF4Q9NR80 690 aa8.82□□□□□ -1
LSM2-210ENST00000470086 KNTC1P50748 2209 aa8.81□□□□□ -1
LSM2-210ENST00000470086 TRAV19A0A0A6YYK7 116 aa8.81□□□□□ -1
LSM2-210ENST00000470086 A0A1B0GVT2 93 aa8.81□□□□□ -1
LSM2-210ENST00000470086 SFI1A8K8P3 1242 aa8.81□□□□□ -1
LSM2-210ENST00000470086 B8ZZF3 427 aa8.81□□□□□ -1
LSM2-210ENST00000470086 K7ERI5 159 aa8.81□□□□□ -1
LSM2-210ENST00000470086 ERVH48-1M5A8F1 160 aa8.81□□□□□ -1
LSM2-210ENST00000470086 BRINP1O60477 761 aa8.81□□□□□ -1
LSM2-210ENST00000470086 HIP1RO75146 1068 aa8.81□□□□□ -1
LSM2-210ENST00000470086 NFATC1O95644 943 aa8.81□□□□□ -1
LSM2-210ENST00000470086 USP17L7P0C7H9 530 aa8.81□□□□□ -1
LSM2-210ENST00000470086 DPP6P42658 865 aa8.81□□□□□ -1
LSM2-210ENST00000470086 EFNA5P52803 228 aa8.81□□□□□ -1
LSM2-210ENST00000470086 AMPD2Q01433 879 aa8.81□□□□□ -1
LSM2-210ENST00000470086 EOGTQ5NDL2 527 aa8.81□□□□□ -1
LSM2-210ENST00000470086 C9orf57Q5W0N0 161 aa8.81□□□□□ -1
LSM2-210ENST00000470086 USP49Q70CQ1 688 aa8.81□□□□□ -1
LSM2-210ENST00000470086 PARP9Q8IXQ6 854 aa8.81□□□□□ -1
LSM2-210ENST00000470086 FBXL16Q8N461 479 aa8.81□□□□□ -1
LSM2-210ENST00000470086 ZNF513Q8N8E2 541 aaPredicted RBP8.81□□□□□ -1
LSM2-210ENST00000470086 SPPL2BQ8TCT7 592 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms