RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 LCP1P13796 627 aa18.65■□□□□ 0.58
MCF2L-221ENST00000469415 OSBPP22059 807 aa18.65■□□□□ 0.58
MCF2L-221ENST00000469415 YY1P25490 414 aa18.65■□□□□ 0.58
MCF2L-221ENST00000469415 ARL4CP56559 192 aa18.65■□□□□ 0.58
MCF2L-221ENST00000469415 ELF3P78545 371 aaPredicted RBP18.65■□□□□ 0.58
MCF2L-221ENST00000469415 ARHGAP1Q07960 439 aa18.65■□□□□ 0.58
MCF2L-221ENST00000469415 VSIG1Q86XK7 387 aa18.65■□□□□ 0.58
MCF2L-221ENST00000469415 ECHDC2Q86YB7 292 aa18.65■□□□□ 0.58
MCF2L-221ENST00000469415 OSMRQ99650 979 aa18.65■□□□□ 0.58
MCF2L-221ENST00000469415 TACO1Q9BSH4 297 aaKnown RBP18.65■□□□□ 0.58
MCF2L-221ENST00000469415 DPEP3Q9H4B8 488 aa18.65■□□□□ 0.58
MCF2L-221ENST00000469415 SLC17A7Q9P2U7 560 aa18.65■□□□□ 0.58
MCF2L-221ENST00000469415 PHTF1Q9UMS5 762 aa18.65■□□□□ 0.58
MCF2L-221ENST00000469415 MRPL42Q9Y6G3 142 aaKnown RBP18.65■□□□□ 0.58
MCF2L-221ENST00000469415 TRUB2O95900 331 aaKnown RBP18.65■□□□□ 0.58
MCF2L-221ENST00000469415 RNASELQ05823 741 aaKnown RBP18.65■□□□□ 0.58
MCF2L-221ENST00000469415 PDIK1LQ8N165 341 aa18.65■□□□□ 0.58
MCF2L-221ENST00000469415 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.65■□□□□ 0.58
MCF2L-221ENST00000469415 CCDC110Q8TBZ0 833 aa18.65■□□□□ 0.58
MCF2L-221ENST00000469415 LRRC8CQ8TDW0 803 aa18.65■□□□□ 0.58
MCF2L-221ENST00000469415 ERP27Q96DN0 273 aa18.65■□□□□ 0.58
MCF2L-221ENST00000469415 EIF2AQ9BY44 585 aaKnown RBP18.65■□□□□ 0.58
MCF2L-221ENST00000469415 MAGED2Q9UNF1 606 aaPredicted RBP18.65■□□□□ 0.58
MCF2L-221ENST00000469415 LCTP09848 1927 aa18.65■□□□□ 0.58
MCF2L-221ENST00000469415 ITGAVP06756 1048 aa18.64■□□□□ 0.57
MCF2L-221ENST00000469415 APRTP07741 180 aa18.64■□□□□ 0.57
MCF2L-221ENST00000469415 IRX4P78413 519 aa18.64■□□□□ 0.57
MCF2L-221ENST00000469415 ITIH4Q14624 930 aa18.64■□□□□ 0.57
MCF2L-221ENST00000469415 LRRC38Q5VT99 294 aa18.64■□□□□ 0.57
MCF2L-221ENST00000469415 PPIL6Q8IXY8 311 aa18.64■□□□□ 0.57
MCF2L-221ENST00000469415 NKD2Q969F2 451 aaPredicted RBP18.64■□□□□ 0.57
MCF2L-221ENST00000469415 ZMAT2Q96NC0 199 aaKnown RBP18.64■□□□□ 0.57
MCF2L-221ENST00000469415 NPHS2Q9NP85 383 aa18.64■□□□□ 0.57
MCF2L-221ENST00000469415 PARP14Q460N5 1801 aa18.64■□□□□ 0.57
MCF2L-221ENST00000469415 SPDYE5A6NIY4 337 aa18.64■□□□□ 0.57
MCF2L-221ENST00000469415 ALOX15BO15296 676 aa18.64■□□□□ 0.57
MCF2L-221ENST00000469415 TARSP26639 723 aaKnown RBP18.64■□□□□ 0.57
MCF2L-221ENST00000469415 GBP2P32456 591 aaPredicted RBP18.64■□□□□ 0.57
MCF2L-221ENST00000469415 MSH2P43246 934 aa18.64■□□□□ 0.57
MCF2L-221ENST00000469415 C9orf131Q5VYM1 1079 aa18.64■□□□□ 0.57
MCF2L-221ENST00000469415 BBS12Q6ZW61 710 aa18.64■□□□□ 0.57
MCF2L-221ENST00000469415 KIRREL3Q8IZU9 778 aa18.64■□□□□ 0.57
MCF2L-221ENST00000469415 SLC10A4Q96EP9 437 aa18.64■□□□□ 0.57
MCF2L-221ENST00000469415 ARL2BPQ9Y2Y0 163 aa18.64■□□□□ 0.57
MCF2L-221ENST00000469415 MAD1L1Q9Y6D9 718 aa18.64■□□□□ 0.57
MCF2L-221ENST00000469415 ATXN2Q99700 1313 aaKnown RBP18.64■□□□□ 0.57
MCF2L-221ENST00000469415 C2orf71A6NGG8 1288 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 GPD1P21695 349 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 RBL1P28749 1068 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 NCALDP61601 193 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 ENPEPQ07075 957 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 ZNF618Q5T7W0 954 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 FAM172AQ8WUF8 416 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 TTC17Q96AE7 1141 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 SGIP1Q9BQI5 828 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 KBTBD13C9JR72 458 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 CCDC130P13994 396 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 ROR1Q01973 937 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 DPYSL3Q14195 570 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 SPARCL1Q14515 664 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 PPP1R21Q6ZMI0 780 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 CATSPER4Q7RTX7 472 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 PPM1NQ8N819 430 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 TCP10LQ8TDR4 215 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 MAGEB18Q96M61 343 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 TRIM6Q9C030 488 aaPredicted RBP18.63■□□□□ 0.57
MCF2L-221ENST00000469415 ASNSD1Q9NWL6 643 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 DRG1Q9Y295 367 aaKnown RBP18.63■□□□□ 0.57
MCF2L-221ENST00000469415 IKBKGQ9Y6K9 419 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 EIF4E1BA6NMX2 242 aaKnown RBP18.63■□□□□ 0.57
MCF2L-221ENST00000469415 ERFP50548 548 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 TAP1Q03518 808 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 KBTBD12Q3ZCT8 623 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 LACTB2Q53H82 288 aaPredicted RBP18.63■□□□□ 0.57
MCF2L-221ENST00000469415 NT5C1AQ9BXI3 368 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 BCO2Q9BYV7 579 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 DHX35Q9H5Z1 703 aaKnown RBP18.63■□□□□ 0.57
MCF2L-221ENST00000469415 ETNK1Q9HBU6 452 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 TMPRSS4Q9NRS4 437 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 RABGEF1Q9UJ41 708 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 MFHAS1Q9Y4C4 1052 aa18.63■□□□□ 0.57
MCF2L-221ENST00000469415 IL18RAPO95256 599 aa18.62■□□□□ 0.57
MCF2L-221ENST00000469415 KRT16P08779 473 aa18.62■□□□□ 0.57
MCF2L-221ENST00000469415 BMPR2Q13873 1038 aa18.62■□□□□ 0.57
MCF2L-221ENST00000469415 CCHCR1Q8TD31 782 aa18.62■□□□□ 0.57
MCF2L-221ENST00000469415 PSMC3IPQ9P2W1 217 aaPredicted RBP18.62■□□□□ 0.57
MCF2L-221ENST00000469415 LGALS13Q9UHV8 139 aa18.62■□□□□ 0.57
MCF2L-221ENST00000469415 HAO1Q9UJM8 370 aa18.62■□□□□ 0.57
MCF2L-221ENST00000469415 DNAJC25-GNG10A0A024R161 153 aa18.62■□□□□ 0.57
MCF2L-221ENST00000469415 A0A0G2JND7 137 aa18.62■□□□□ 0.57
MCF2L-221ENST00000469415 DYNC1LI2O43237 492 aaPredicted RBP18.62■□□□□ 0.57
MCF2L-221ENST00000469415 TSPAN1O60635 241 aa18.62■□□□□ 0.57
MCF2L-221ENST00000469415 BCAR1P56945 870 aa18.62■□□□□ 0.57
MCF2L-221ENST00000469415 GEMIN4P57678 1058 aaKnown RBP18.62■□□□□ 0.57
MCF2L-221ENST00000469415 PRPF39Q86UA1 669 aaKnown RBP18.62■□□□□ 0.57
MCF2L-221ENST00000469415 TTC30AQ86WT1 665 aa18.62■□□□□ 0.57
MCF2L-221ENST00000469415 FAM149B1Q96BN6 582 aa18.62■□□□□ 0.57
MCF2L-221ENST00000469415 NXF3Q9H4D5 531 aaKnown RBP18.62■□□□□ 0.57
MCF2L-221ENST00000469415 CCDC134Q9H6E4 229 aa18.62■□□□□ 0.57
MCF2L-221ENST00000469415 BARX2Q9UMQ3 279 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms