RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 MTMR6Q9Y217 621 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 CPQQ9Y646 472 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 CEP295Q9C0D2 2601 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 CDX4O14627 284 aaPredicted RBP13.05□□□□□ -0.32
COL5A1-207ENST00000469093 SLC9A3R1O14745 358 aaPredicted RBP13.05□□□□□ -0.32
COL5A1-207ENST00000469093 SCAMP3O14828 347 aaKnown RBP13.05□□□□□ -0.32
COL5A1-207ENST00000469093 KHNYNO15037 678 aaKnown RBP13.05□□□□□ -0.32
COL5A1-207ENST00000469093 ABL1P00519 1130 aa13.05□□□□□ -0.32
COL5A1-207ENST00000469093 OAS1P00973 400 aaKnown RBP13.05□□□□□ -0.32
COL5A1-207ENST00000469093 DLATP10515 647 aaKnown RBP13.05□□□□□ -0.32
COL5A1-207ENST00000469093 TNNI1P19237 187 aa13.05□□□□□ -0.32
COL5A1-207ENST00000469093 NASPP49321 788 aaPredicted RBP13.05□□□□□ -0.32
COL5A1-207ENST00000469093 IRX4P78413 519 aa13.05□□□□□ -0.32
COL5A1-207ENST00000469093 MRPS21P82921 87 aaKnown RBP13.05□□□□□ -0.32
COL5A1-207ENST00000469093 E2F4Q16254 413 aa13.05□□□□□ -0.32
COL5A1-207ENST00000469093 SNRNP35Q16560 246 aaKnown RBP13.05□□□□□ -0.32
COL5A1-207ENST00000469093 WDR72Q3MJ13 1102 aa13.05□□□□□ -0.32
COL5A1-207ENST00000469093 EMC10Q5UCC4 262 aa13.05□□□□□ -0.32
COL5A1-207ENST00000469093 DAB2IPQ5VWQ8 1189 aa13.05□□□□□ -0.32
COL5A1-207ENST00000469093 TDRD10Q5VZ19 366 aaKnown RBP13.05□□□□□ -0.32
COL5A1-207ENST00000469093 EPM2AIP1Q7L775 607 aaPredicted RBP13.05□□□□□ -0.32
COL5A1-207ENST00000469093 C11orf74Q86VG3 221 aa13.05□□□□□ -0.32
COL5A1-207ENST00000469093 OLIG1Q8TAK6 271 aa13.05□□□□□ -0.32
COL5A1-207ENST00000469093 ZNF516Q92618 1163 aa13.05□□□□□ -0.32
COL5A1-207ENST00000469093 CCDC127Q96BQ5 260 aa13.05□□□□□ -0.32
COL5A1-207ENST00000469093 PNKPQ96T60 521 aa13.05□□□□□ -0.32
COL5A1-207ENST00000469093 B3GNT5Q9BYG0 378 aa13.05□□□□□ -0.32
COL5A1-207ENST00000469093 LRRC27Q9C0I9 530 aa13.05□□□□□ -0.32
COL5A1-207ENST00000469093 TNMDQ9H2S6 317 aa13.05□□□□□ -0.32
COL5A1-207ENST00000469093 DPEP3Q9H4B8 488 aa13.05□□□□□ -0.32
COL5A1-207ENST00000469093 CFAP97Q9P2B7 532 aa13.05□□□□□ -0.32
COL5A1-207ENST00000469093 CHD6Q8TD26 2715 aa13.04□□□□□ -0.32
COL5A1-207ENST00000469093 PATE3B3GLJ2 98 aa13.04□□□□□ -0.32
COL5A1-207ENST00000469093 SGK1O00141 431 aa13.04□□□□□ -0.32
COL5A1-207ENST00000469093 CLDN5O00501 218 aa13.04□□□□□ -0.32
COL5A1-207ENST00000469093 KAT7O95251 611 aa13.04□□□□□ -0.32
COL5A1-207ENST00000469093 NOVA1P51513 510 aaKnown RBP13.04□□□□□ -0.32
COL5A1-207ENST00000469093 PSMD6Q15008 389 aa13.04□□□□□ -0.32
COL5A1-207ENST00000469093 C12orf40Q86WS4 652 aa13.04□□□□□ -0.32
COL5A1-207ENST00000469093 TTC30AQ86WT1 665 aa13.04□□□□□ -0.32
COL5A1-207ENST00000469093 ALLCQ8N6M5 410 aa13.04□□□□□ -0.32
COL5A1-207ENST00000469093 IL17RCQ8NAC3 791 aa13.04□□□□□ -0.32
COL5A1-207ENST00000469093 TXNDC5Q8NBS9 432 aaKnown RBP13.04□□□□□ -0.32
COL5A1-207ENST00000469093 LINC00301Q8NCQ3 95 aa13.04□□□□□ -0.32
COL5A1-207ENST00000469093 RLN3Q8WXF3 142 aa13.04□□□□□ -0.32
COL5A1-207ENST00000469093 SLITRK1Q96PX8 696 aa13.04□□□□□ -0.32
COL5A1-207ENST00000469093 ZNF518BQ9C0D4 1074 aa13.04□□□□□ -0.32
COL5A1-207ENST00000469093 GZF1Q9H116 711 aaPredicted RBP13.04□□□□□ -0.32
COL5A1-207ENST00000469093 AGPAT3Q9NRZ7 376 aa13.04□□□□□ -0.32
COL5A1-207ENST00000469093 CHORDC1Q9UHD1 332 aaPredicted RBP13.04□□□□□ -0.32
COL5A1-207ENST00000469093 MYO18AQ92614 2054 aaKnown RBP13.04□□□□□ -0.32
COL5A1-207ENST00000469093 MYOFQ9NZM1 2061 aa13.04□□□□□ -0.32
COL5A1-207ENST00000469093 THADAQ6YHU6 1953 aa13.03□□□□□ -0.32
COL5A1-207ENST00000469093 NUP205Q92621 2012 aa13.03□□□□□ -0.32
COL5A1-207ENST00000469093 PCNX2A6NKB5 2137 aa13.03□□□□□ -0.32
COL5A1-207ENST00000469093 A8MXQ7 604 aa13.03□□□□□ -0.32
COL5A1-207ENST00000469093 CLIC2O15247 247 aa13.03□□□□□ -0.32
COL5A1-207ENST00000469093 EIF3DO15371 548 aaKnown RBP eCLIP13.03□□□□□ -0.32
COL5A1-207ENST00000469093 ALDH1A2O94788 518 aa13.03□□□□□ -0.32
COL5A1-207ENST00000469093 KLF8O95600 359 aaPredicted RBP13.03□□□□□ -0.32
COL5A1-207ENST00000469093 MBL2P11226 248 aaPredicted RBP13.03□□□□□ -0.32
COL5A1-207ENST00000469093 YWHAQP27348 245 aa13.03□□□□□ -0.32
COL5A1-207ENST00000469093 TIE1P35590 1138 aa13.03□□□□□ -0.32
COL5A1-207ENST00000469093 EIF2DP41214 584 aaKnown RBP13.03□□□□□ -0.32
COL5A1-207ENST00000469093 P2RY2P41231 377 aa13.03□□□□□ -0.32
COL5A1-207ENST00000469093 GRIA2P42262 883 aa13.03□□□□□ -0.32
COL5A1-207ENST00000469093 KIR2DL1P43626 348 aaPredicted RBP13.03□□□□□ -0.32
COL5A1-207ENST00000469093 DHPSP49366 369 aaPredicted RBP13.03□□□□□ -0.32
COL5A1-207ENST00000469093 MYL6P60660 151 aa13.03□□□□□ -0.32
COL5A1-207ENST00000469093 AMPD3Q01432 767 aa13.03□□□□□ -0.32
COL5A1-207ENST00000469093 CYP24A1Q07973 514 aa13.03□□□□□ -0.32
COL5A1-207ENST00000469093 SH3PXD2AQ5TCZ1 1133 aa13.03□□□□□ -0.32
COL5A1-207ENST00000469093 CNNM4Q6P4Q7 775 aa13.03□□□□□ -0.32
COL5A1-207ENST00000469093 CYP2U1Q7Z449 544 aa13.03□□□□□ -0.32
COL5A1-207ENST00000469093 NUP93Q8N1F7 819 aa13.03□□□□□ -0.32
COL5A1-207ENST00000469093 FRMD1Q8N878 549 aa13.03□□□□□ -0.32
COL5A1-207ENST00000469093 SCFD1Q8WVM8 642 aa13.03□□□□□ -0.32
COL5A1-207ENST00000469093 PIGKQ92643 395 aa13.03□□□□□ -0.32
COL5A1-207ENST00000469093 DHX58Q96C10 678 aa13.03□□□□□ -0.32
COL5A1-207ENST00000469093 INTS4Q96HW7 963 aaKnown RBP13.03□□□□□ -0.32
COL5A1-207ENST00000469093 FNBP1Q96RU3 617 aa13.03□□□□□ -0.32
COL5A1-207ENST00000469093 KCNK16Q96T55 309 aa13.03□□□□□ -0.32
COL5A1-207ENST00000469093 CGRRF1Q99675 332 aa13.03□□□□□ -0.32
COL5A1-207ENST00000469093 ELOVL4Q9GZR5 314 aa13.03□□□□□ -0.32
COL5A1-207ENST00000469093 XYLT2Q9H1B5 865 aa13.03□□□□□ -0.32
COL5A1-207ENST00000469093 ZSCAN16Q9H4T2 348 aaPredicted RBP13.03□□□□□ -0.32
COL5A1-207ENST00000469093 TBC1D14Q9P2M4 693 aa13.03□□□□□ -0.32
COL5A1-207ENST00000469093 TFIP11Q9UBB9 837 aaKnown RBP13.03□□□□□ -0.32
COL5A1-207ENST00000469093 MYO16Q9Y6X6 1858 aa13.03□□□□□ -0.32
COL5A1-207ENST00000469093 ASCC3Q8N3C0 2202 aaKnown RBP13.03□□□□□ -0.32
COL5A1-207ENST00000469093 E2F8A0AVK6 867 aa13.02□□□□□ -0.33
COL5A1-207ENST00000469093 SPTLC2O15270 562 aa13.02□□□□□ -0.33
COL5A1-207ENST00000469093 COCHO43405 550 aa13.02□□□□□ -0.33
COL5A1-207ENST00000469093 ADAM23O75077 832 aa13.02□□□□□ -0.33
COL5A1-207ENST00000469093 STAU1O95793 577 aaKnown RBP13.02□□□□□ -0.33
COL5A1-207ENST00000469093 ADH1CP00326 375 aa13.02□□□□□ -0.33
COL5A1-207ENST00000469093 APODP05090 189 aa13.02□□□□□ -0.33
COL5A1-207ENST00000469093 PROS1P07225 676 aa13.02□□□□□ -0.33
COL5A1-207ENST00000469093 CEACAM1P13688 526 aa13.02□□□□□ -0.33
COL5A1-207ENST00000469093 TNFRSF4P43489 277 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms