RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 RTN2O75298 545 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 RTN3O95197 1032 aaPredicted RBP8.56□□□□□ -1.04
HDAC6-216ENST00000468949 NDUFA10O95299 355 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 C8AP07357 584 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 CCDC175P0C221 793 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 MYBL1P10243 752 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 HAPLN1P10915 354 aaPredicted RBP8.56□□□□□ -1.04
HDAC6-216ENST00000468949 LCP1P13796 627 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 PLA2G4AP47712 749 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 RGS7P49802 495 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 CLCN4P51793 760 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 SLC5A3P53794 718 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 NOMO3P69849 1222 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 CENPCQ03188 943 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 TFF2Q03403 129 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 ADIGQ0VDE8 80 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 TWF1Q12792 350 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 COL19A1Q14993 1142 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 C10orf76Q5T2E6 689 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 ALKBH5Q6P6C2 394 aaKnown RBP8.56□□□□□ -1.04
HDAC6-216ENST00000468949 WDR59Q6PJI9 974 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 RSPO2Q6UXX9 243 aaPredicted RBP8.56□□□□□ -1.04
HDAC6-216ENST00000468949 MMS22LQ6ZRQ5 1243 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 EP400NLQ6ZTU2 488 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 CLEC20AQ6ZU45 233 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 TOGARAM2Q6ZUX3 1019 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 ADAMTS19Q8TE59 1207 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 DDX1Q92499 740 aaKnown RBP8.56□□□□□ -1.04
HDAC6-216ENST00000468949 CASP10Q92851 521 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 ZNF653Q96CK0 615 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 PABPC5Q96DU9 382 aaKnown RBP8.56□□□□□ -1.04
HDAC6-216ENST00000468949 PPP1R13BQ96KQ4 1090 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 HSFY1Q96LI6 401 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 PKMYT1Q99640 499 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 C11orf70Q9BRQ4 267 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 TRIM62Q9BVG3 475 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 COL25A1Q9BXS0 654 aaPredicted RBP8.56□□□□□ -1.04
HDAC6-216ENST00000468949 FBXO44Q9H4M3 255 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 PLEKHA4Q9H4M7 779 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 IGFLR1Q9H665 355 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 PNPLA8Q9NP80 782 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 DZANK1Q9NVP4 752 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 ADAM22Q9P0K1 906 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 FBXW11Q9UKB1 542 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 MAGED2Q9UNF1 606 aaPredicted RBP8.56□□□□□ -1.04
HDAC6-216ENST00000468949 SLC27A5Q9Y2P5 690 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 VWA8A3KMH1 1905 aa8.56□□□□□ -1.04
HDAC6-216ENST00000468949 A0A087X0T9 212 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 EIF3CLB5ME19 914 aaKnown RBP8.55□□□□□ -1.04
HDAC6-216ENST00000468949 E5RJQ4 531 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 CCP110O43303 1012 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 NCK2O43639 380 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 LILRB3O75022 631 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 SOAT2O75908 522 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 ABLIM3O94929 683 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 FBXO21O94952 628 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 C1RP00736 705 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 CYP1A1P04798 512 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-216ENST00000468949 H2AFZP0C0S5 128 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 SPATA31D3P0C874 917 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 FAM228BP0C875 321 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 CSH1P0DML2 217 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 CSH2P0DML3 217 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 GZMAP12544 262 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 CHRNB2P17787 502 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 ABCB4P21439 1286 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 KCNA5P22460 613 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 FECHP22830 423 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 CDH5P33151 784 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-216ENST00000468949 KCNQ1P51787 676 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 TKTL1P51854 596 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 NAP1L1P55209 391 aaKnown RBP8.55□□□□□ -1.04
HDAC6-216ENST00000468949 DUSP6Q16828 381 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 DDR2Q16832 855 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 FAM102AQ5T9C2 384 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-216ENST00000468949 OR6B2Q6IFH4 312 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 ACAD10Q6JQN1 1059 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 DNAJC24Q6P3W2 148 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 SPATA31D4Q6ZUB0 917 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 DENND5BQ6ZUT9 1274 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 H2AFVQ71UI9 128 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 RTL10Q7L3V2 364 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 ADGRD2Q7Z7M1 963 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 PIGZQ86VD9 579 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 ZDHHC17Q8IUH5 632 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 TCEAL8Q8IYN2 117 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 NUP93Q8N1F7 819 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 TTC9BQ8N6N2 239 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 SLC30A5Q8TAD4 765 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 GIPC2Q8TF65 315 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 STK32AQ8WU08 396 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 HDAC7Q8WUI4 952 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 FBXO32Q969P5 355 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 FAM149B1Q96BN6 582 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 C18orf8Q96DM3 657 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 C8orf48Q96LL4 319 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 CEP295NLQ96MC4 621 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 ZNF512Q96ME7 567 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-216ENST00000468949 SLITRK1Q96PX8 696 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 EIF3CQ99613 913 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms