RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 EML3Q32P44 896 aa23.15■■□□□ 1.3
TTC28-204ENST00000468807 ZACNQ401N2 412 aa23.15■■□□□ 1.3
TTC28-204ENST00000468807 FAM35AQ86V20 835 aa23.15■■□□□ 1.3
TTC28-204ENST00000468807 LONP2Q86WA8 852 aa23.15■■□□□ 1.3
TTC28-204ENST00000468807 TMEM174Q8WUU8 243 aa23.15■■□□□ 1.3
TTC28-204ENST00000468807 SDCBP2Q9H190 292 aa23.15■■□□□ 1.3
TTC28-204ENST00000468807 LINC00597Q9H2U6 94 aa23.15■■□□□ 1.3
TTC28-204ENST00000468807 FBRSL1Q9HCM7 1045 aaKnown RBP23.15■■□□□ 1.3
TTC28-204ENST00000468807 SMPD4Q9NXE4 827 aa23.15■■□□□ 1.3
TTC28-204ENST00000468807 USP18Q9UMW8 372 aa23.15■■□□□ 1.3
TTC28-204ENST00000468807 CEP250Q9BV73 2442 aa23.15■■□□□ 1.3
TTC28-204ENST00000468807 LEFTY2O00292 366 aa23.14■■□□□ 1.29
TTC28-204ENST00000468807 DRD1P21728 446 aa23.14■■□□□ 1.29
TTC28-204ENST00000468807 YWHAQP27348 245 aa23.14■■□□□ 1.29
TTC28-204ENST00000468807 VAMP7P51809 220 aa23.14■■□□□ 1.29
TTC28-204ENST00000468807 NR1H3Q13133 447 aa23.14■■□□□ 1.29
TTC28-204ENST00000468807 SPOPLQ6IQ16 392 aa23.14■■□□□ 1.29
TTC28-204ENST00000468807 SV2AQ7L0J3 742 aa23.14■■□□□ 1.29
TTC28-204ENST00000468807 ACOT1Q86TX2 421 aa23.14■■□□□ 1.29
TTC28-204ENST00000468807 NUP93Q8N1F7 819 aa23.14■■□□□ 1.29
TTC28-204ENST00000468807 TMC2Q8TDI7 906 aa23.14■■□□□ 1.29
TTC28-204ENST00000468807 FBXO32Q969P5 355 aa23.14■■□□□ 1.29
TTC28-204ENST00000468807 KCNK16Q96T55 309 aa23.14■■□□□ 1.29
TTC28-204ENST00000468807 RNF38Q9H0F5 515 aa23.14■■□□□ 1.29
TTC28-204ENST00000468807 MMRN2Q9H8L6 949 aa23.14■■□□□ 1.29
TTC28-204ENST00000468807 SLC8A2Q9UPR5 921 aa23.14■■□□□ 1.29
TTC28-204ENST00000468807 TRAF3IP3Q9Y228 551 aa23.14■■□□□ 1.29
TTC28-204ENST00000468807 CPQQ9Y646 472 aa23.14■■□□□ 1.29
TTC28-204ENST00000468807 HRO43593 1189 aa23.13■■□□□ 1.29
TTC28-204ENST00000468807 ATG13O75143 517 aa23.13■■□□□ 1.29
TTC28-204ENST00000468807 ZNF202O95125 648 aa23.13■■□□□ 1.29
TTC28-204ENST00000468807 NFATC1O95644 943 aa23.13■■□□□ 1.29
TTC28-204ENST00000468807 TRIM49P0CI25 452 aa23.13■■□□□ 1.29
TTC28-204ENST00000468807 TRIM49CP0CI26 452 aa23.13■■□□□ 1.29
TTC28-204ENST00000468807 PFKLP17858 780 aa23.13■■□□□ 1.29
TTC28-204ENST00000468807 PXNP49023 591 aaPredicted RBP23.13■■□□□ 1.29
TTC28-204ENST00000468807 CD101Q93033 1021 aa23.13■■□□□ 1.29
TTC28-204ENST00000468807 KRT82Q9NSB4 513 aa23.13■■□□□ 1.29
TTC28-204ENST00000468807 SCAMP3O14828 347 aaKnown RBP23.12■■□□□ 1.29
TTC28-204ENST00000468807 IKBKBO14920 756 aa23.12■■□□□ 1.29
TTC28-204ENST00000468807 AP1G2O75843 785 aa23.12■■□□□ 1.29
TTC28-204ENST00000468807 RTN3O95197 1032 aaPredicted RBP23.12■■□□□ 1.29
TTC28-204ENST00000468807 HLA-DRAP01903 254 aa23.12■■□□□ 1.29
TTC28-204ENST00000468807 MBL2P11226 248 aaPredicted RBP23.12■■□□□ 1.29
TTC28-204ENST00000468807 KRT13P13646 458 aa23.12■■□□□ 1.29
TTC28-204ENST00000468807 TCF3P15923 654 aa23.12■■□□□ 1.29
TTC28-204ENST00000468807 NDST1P52848 882 aa23.12■■□□□ 1.29
TTC28-204ENST00000468807 ZXDBP98169 803 aa23.12■■□□□ 1.29
TTC28-204ENST00000468807 LAIR1Q6GTX8 287 aa23.12■■□□□ 1.29
TTC28-204ENST00000468807 CEP68Q76N32 757 aa23.12■■□□□ 1.29
TTC28-204ENST00000468807 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.12■■□□□ 1.29
TTC28-204ENST00000468807 GPR161Q8N6U8 529 aaKnown RBP23.12■■□□□ 1.29
TTC28-204ENST00000468807 TAF4BQ92750 862 aa23.12■■□□□ 1.29
TTC28-204ENST00000468807 SMARCD1Q96GM5 515 aa23.12■■□□□ 1.29
TTC28-204ENST00000468807 CCDC34Q96HJ3 373 aa23.12■■□□□ 1.29
TTC28-204ENST00000468807 IMPG2Q9BZV3 1241 aa23.12■■□□□ 1.29
TTC28-204ENST00000468807 DMAP1Q9NPF5 467 aaPredicted RBP23.12■■□□□ 1.29
TTC28-204ENST00000468807 HMGXB4Q9UGU5 601 aa23.12■■□□□ 1.29
TTC28-204ENST00000468807 AKAP3O75969 853 aa23.11■■□□□ 1.29
TTC28-204ENST00000468807 CCDC130P13994 396 aa23.11■■□□□ 1.29
TTC28-204ENST00000468807 RPL13P26373 211 aaKnown RBP23.11■■□□□ 1.29
TTC28-204ENST00000468807 CNR2P34972 360 aa23.11■■□□□ 1.29
TTC28-204ENST00000468807 GCLMP48507 274 aa23.11■■□□□ 1.29
TTC28-204ENST00000468807 SLC5A3P53794 718 aa23.11■■□□□ 1.29
TTC28-204ENST00000468807 SLC7A9P82251 487 aa23.11■■□□□ 1.29
TTC28-204ENST00000468807 C1orf220Q5T0J3 134 aa23.11■■□□□ 1.29
TTC28-204ENST00000468807 INTS8Q75QN2 995 aaKnown RBP23.11■■□□□ 1.29
TTC28-204ENST00000468807 FILIP1Q7Z7B0 1213 aa23.11■■□□□ 1.29
TTC28-204ENST00000468807 FAM186BQ8IYM0 893 aa23.11■■□□□ 1.29
TTC28-204ENST00000468807 PDZD8Q8NEN9 1154 aa23.11■■□□□ 1.29
TTC28-204ENST00000468807 RPLP0P6Q8NHW5 317 aa23.11■■□□□ 1.29
TTC28-204ENST00000468807 SCAMP5Q8TAC9 235 aa23.11■■□□□ 1.29
TTC28-204ENST00000468807 FAM49BQ9NUQ9 324 aa23.11■■□□□ 1.29
TTC28-204ENST00000468807 POLR3BQ9NW08 1133 aaPredicted RBP23.11■■□□□ 1.29
TTC28-204ENST00000468807 CFAP97Q9P2B7 532 aa23.11■■□□□ 1.29
TTC28-204ENST00000468807 CHORDC1Q9UHD1 332 aaPredicted RBP23.11■■□□□ 1.29
TTC28-204ENST00000468807 ASS1P00966 412 aaKnown RBP23.1■■□□□ 1.29
TTC28-204ENST00000468807 OAS1P00973 400 aaKnown RBP23.1■■□□□ 1.29
TTC28-204ENST00000468807 TRIM21P19474 475 aaKnown RBP23.1■■□□□ 1.29
TTC28-204ENST00000468807 ASPAP45381 313 aa23.1■■□□□ 1.29
TTC28-204ENST00000468807 FOXK2Q01167 660 aa23.1■■□□□ 1.29
TTC28-204ENST00000468807 SPEM2Q0P670 501 aa23.1■■□□□ 1.29
TTC28-204ENST00000468807 ADAM9Q13443 819 aa23.1■■□□□ 1.29
TTC28-204ENST00000468807 RSPO4Q2I0M5 234 aaPredicted RBP23.1■■□□□ 1.29
TTC28-204ENST00000468807 FBXO43Q4G163 708 aa23.1■■□□□ 1.29
TTC28-204ENST00000468807 PAQR9Q6ZVX9 377 aa23.1■■□□□ 1.29
TTC28-204ENST00000468807 ERMP1Q7Z2K6 904 aa23.1■■□□□ 1.29
TTC28-204ENST00000468807 SMYD4Q8IYR2 804 aaPredicted RBP23.1■■□□□ 1.29
TTC28-204ENST00000468807 FUKQ8N0W3 1084 aa23.1■■□□□ 1.29
TTC28-204ENST00000468807 GUF1Q8N442 669 aaKnown RBP23.1■■□□□ 1.29
TTC28-204ENST00000468807 SLC2A14Q8TDB8 520 aa23.1■■□□□ 1.29
TTC28-204ENST00000468807 GOLGA6L4A6NEF3 574 aa23.09■■□□□ 1.29
TTC28-204ENST00000468807 MAPK13O15264 365 aa23.09■■□□□ 1.29
TTC28-204ENST00000468807 OLFM2O95897 454 aa23.09■■□□□ 1.29
TTC28-204ENST00000468807 PSMC2P35998 433 aaKnown RBP23.09■■□□□ 1.29
TTC28-204ENST00000468807 BECN1Q14457 450 aa23.09■■□□□ 1.29
TTC28-204ENST00000468807 DGLUCYQ7Z3D6 616 aa23.09■■□□□ 1.29
TTC28-204ENST00000468807 WDR5BQ86VZ2 330 aa23.09■■□□□ 1.29
TTC28-204ENST00000468807 C12orf29Q8N999 325 aa23.09■■□□□ 1.29
TTC28-204ENST00000468807 ADORA2BP29275 332 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms