RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 FILIP1LQ4L180 1135 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 PABPC1LQ4VXU2 614 aaKnown RBP3.74□□□□□ -1.81
TRIM59-202ENST00000468542 SLC39A12Q504Y0 691 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 FIGNQ5HY92 759 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 PPM1LQ5SGD2 360 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 LCE1DQ5T752 114 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 ARHGAP17Q68EM7 881 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 SCARA3Q6AZY7 606 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 IQCEQ6IPM2 695 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 RSPO2Q6UXX9 243 aaPredicted RBP3.74□□□□□ -1.81
TRIM59-202ENST00000468542 RBM23Q86U06 439 aaKnown RBP3.74□□□□□ -1.81
TRIM59-202ENST00000468542 LRRTM3Q86VH5 581 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 SPATA2LQ8IUW3 424 aaPredicted RBP3.74□□□□□ -1.81
TRIM59-202ENST00000468542 SCML4Q8N228 414 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 ELMOD1Q8N336 334 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 VWA5B2Q8N398 1253 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 AOPEPQ8N6M6 819 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 OR6B3Q8NGW1 331 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 SLC7A14Q8TBB6 771 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 STK32AQ8WU08 396 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 AUTS2Q8WXX7 1259 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 OVCA2Q8WZ82 227 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 SHC3Q92529 594 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 NXPE3Q969Y0 559 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 ZNF707Q96C28 371 aaPredicted RBP3.74□□□□□ -1.81
TRIM59-202ENST00000468542 SMARCD1Q96GM5 515 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 PCED1BQ96HM7 432 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 TMEM176AQ96HP8 235 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 C8orf48Q96LL4 319 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 ASB2Q96Q27 587 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 KCTD15Q96SI1 283 aaPredicted RBP3.74□□□□□ -1.81
TRIM59-202ENST00000468542 PI4K2AQ9BTU6 479 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 PHF7Q9BWX1 381 aaPredicted RBP3.74□□□□□ -1.81
TRIM59-202ENST00000468542 NAA15Q9BXJ9 866 aaKnown RBP3.74□□□□□ -1.81
TRIM59-202ENST00000468542 EDEM3Q9BZQ6 932 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 GPR88Q9GZN0 384 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 INTS2Q9H0H0 1204 aaKnown RBP3.74□□□□□ -1.81
TRIM59-202ENST00000468542 TSPY26PQ9H489 355 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 SMYD3Q9H7B4 428 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 CYP4F11Q9HBI6 524 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 CBX8Q9HC52 389 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 CSNK1G1Q9HCP0 422 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 WDR6Q9NNW5 1121 aaKnown RBP3.74□□□□□ -1.81
TRIM59-202ENST00000468542 DMAP1Q9NPF5 467 aaPredicted RBP3.74□□□□□ -1.81
TRIM59-202ENST00000468542 CRTAC1Q9NQ79 661 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 CISHQ9NSE2 258 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 TMEM51Q9NW97 253 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 GDE1Q9NZC3 331 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 UXTQ9UBK9 157 aaPredicted RBP3.74□□□□□ -1.81
TRIM59-202ENST00000468542 SIK3Q9Y2K2 1263 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 YIPF1Q9Y548 306 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 PCDHGC5Q9Y5F6 944 aa3.74□□□□□ -1.81
TRIM59-202ENST00000468542 TIMM13Q9Y5L4 95 aaPredicted RBP3.74□□□□□ -1.81
TRIM59-202ENST00000468542 WDFY4Q6ZS81 3184 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 ITIH6Q6UXX5 1313 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 TCF20Q9UGU0 1960 aaKnown RBP3.73□□□□□ -1.81
TRIM59-202ENST00000468542 KIAA1549LQ6ZVL6 1849 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 CCDC195A0A1B0GUA6 201 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 MYBPHLA2RUH7 354 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 F8VZ95 297 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 O00370 1275 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 LINC01565O15544 149 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 SART1O43290 800 aaKnown RBP3.73□□□□□ -1.81
TRIM59-202ENST00000468542 MBTPS2O43462 519 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 MED7O43513 233 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 NOL4O94818 638 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 RTN3O95197 1032 aaPredicted RBP3.73□□□□□ -1.81
TRIM59-202ENST00000468542 SEC24AO95486 1093 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 VNN2O95498 520 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 LSM8O95777 96 aaKnown RBP3.73□□□□□ -1.81
TRIM59-202ENST00000468542 LRG1P02750 347 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 WEE2P0C1S8 567 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 CCDC172P0C7W6 258 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 FAM200BP0CF97 657 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 SETSIPP0DME0 302 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 VDRP11473 427 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 ATP1A3P13637 1013 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 NPR3P17342 541 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 PTPN2P17706 415 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 ATF6P18850 670 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 CDK11BP21127 795 aaKnown RBP3.73□□□□□ -1.81
TRIM59-202ENST00000468542 LMO2P25791 158 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 DDX6P26196 483 aaKnown RBP eCLIP3.73□□□□□ -1.81
TRIM59-202ENST00000468542 CDC25CP30307 473 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 CA8P35219 290 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 GTF2F1P35269 517 aaKnown RBP eCLIP3.73□□□□□ -1.819e-6■□□□□ 8.8
TRIM59-202ENST00000468542 PLA2G4AP47712 749 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 ALDH1A3P47895 512 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 RPL34P49207 117 aaKnown RBP3.73□□□□□ -1.81
TRIM59-202ENST00000468542 PDE6CP51160 858 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 COPB1P53618 953 aaKnown RBP3.73□□□□□ -1.81
TRIM59-202ENST00000468542 BCAT1P54687 386 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 RAD23BP54727 409 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 SNX16P57768 344 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 PTK2Q05397 1052 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 DLX2Q07687 328 aaPredicted RBP3.73□□□□□ -1.81
TRIM59-202ENST00000468542 DUSP4Q13115 394 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 NR1I3Q14994 352 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 SKIV2LQ15477 1246 aaKnown RBP3.73□□□□□ -1.81
TRIM59-202ENST00000468542 CNGA2Q16280 664 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms