RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 CCNG1P51959 295 aa16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 OSTNP61366 133 aa16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 ZNF276Q8N554 614 aa16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 SYNCQ9H7C4 482 aa16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 CHMP2BQ9UQN3 213 aa16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 A0A0G2JMZ2 1700 aa16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 SPDYE5A6NIY4 337 aa16.5■□□□□ 0.23
TSPAN4-211ENST00000468468 PEX11AO75192 247 aa16.5■□□□□ 0.23
TSPAN4-211ENST00000468468 HOXC6P09630 235 aa16.5■□□□□ 0.23
TSPAN4-211ENST00000468468 TAF5Q15542 800 aa16.5■□□□□ 0.23
TSPAN4-211ENST00000468468 TAZQ16635 292 aa16.5■□□□□ 0.23
TSPAN4-211ENST00000468468 FAM160B1Q5W0V3 765 aa16.5■□□□□ 0.23
TSPAN4-211ENST00000468468 AP1ARQ63HQ0 302 aa16.5■□□□□ 0.23
TSPAN4-211ENST00000468468 RNF149Q8NC42 400 aa16.5■□□□□ 0.23
TSPAN4-211ENST00000468468 ARMC2Q8NEN0 867 aa16.5■□□□□ 0.23
TSPAN4-211ENST00000468468 RFWD2Q8NHY2 731 aa16.5■□□□□ 0.23
TSPAN4-211ENST00000468468 HSPH1Q92598 858 aa16.5■□□□□ 0.23
TSPAN4-211ENST00000468468 ALKBH8Q96BT7 664 aaKnown RBP16.5■□□□□ 0.23
TSPAN4-211ENST00000468468 SYT17Q9BSW7 474 aa16.5■□□□□ 0.23
TSPAN4-211ENST00000468468 MAF1Q9H063 256 aa16.5■□□□□ 0.23
TSPAN4-211ENST00000468468 LHX5Q9H2C1 402 aa16.5■□□□□ 0.23
TSPAN4-211ENST00000468468 MANSC1Q9H8J5 431 aa16.5■□□□□ 0.23
TSPAN4-211ENST00000468468 MED7O43513 233 aa16.5■□□□□ 0.23
TSPAN4-211ENST00000468468 ARIH2O95376 493 aa16.5■□□□□ 0.23
TSPAN4-211ENST00000468468 TNNC2P02585 160 aa16.5■□□□□ 0.23
TSPAN4-211ENST00000468468 CALB2P22676 271 aa16.5■□□□□ 0.23
TSPAN4-211ENST00000468468 NRLP54845 237 aa16.5■□□□□ 0.23
TSPAN4-211ENST00000468468 LAMTOR4Q0VGL1 99 aa16.5■□□□□ 0.23
TSPAN4-211ENST00000468468 ORC1Q13415 861 aa16.5■□□□□ 0.23
TSPAN4-211ENST00000468468 ZNF398Q8TD17 642 aa16.5■□□□□ 0.23
TSPAN4-211ENST00000468468 FNIP1Q8TF40 1166 aa16.5■□□□□ 0.23
TSPAN4-211ENST00000468468 CPXM1Q96SM3 734 aa16.5■□□□□ 0.23
TSPAN4-211ENST00000468468 VPS11Q9H270 941 aa16.5■□□□□ 0.23
TSPAN4-211ENST00000468468 MT-ND3P03897 115 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 KRT19P08727 400 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 RBP3P10745 1247 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 GM2AP17900 193 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 PTPN4P29074 926 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 TCF7P36402 384 aaPredicted RBP16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 DPYSL3Q14195 570 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 SPDYAQ5MJ70 313 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 IER5Q5VY09 327 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 CLNKQ7Z7G1 428 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 ZBTB8OSQ8IWT0 167 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 ANKRD36BP1Q96IX9 119 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 CALN1Q9BXU9 219 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 KANSL3Q9P2N6 904 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 RBPJLQ9UBG7 517 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 NUMBLQ9Y6R0 609 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 TRAFD1O14545 582 aaPredicted RBP16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 ABLIM1O14639 778 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 MCF2LO15068 1137 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 ERBB2P04626 1255 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 GNAZP19086 355 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 ELK3P41970 407 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 CDH8P55286 799 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 TAF11Q15544 211 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 WDR78Q5VTH9 848 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 XYLT1Q86Y38 959 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 IGDCC3Q8IVU1 814 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 OPTNQ96CV9 577 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 NUDCD1Q96RS6 583 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 CYTH2Q99418 400 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 APOC4-APOC2K7ER74 178 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 SMAPO00193 183 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 CXCL11O14625 94 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 LPXNO60711 386 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 APOC2P02655 101 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 MARK3P27448 753 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 MIPP30301 263 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 CDR2LQ86X02 465 aaPredicted RBP16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 LRRC6Q86X45 466 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 LRRC71Q8N4P6 559 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 STK32AQ8WU08 396 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 PTPRN2Q92932 1015 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 ZNF668Q96K58 619 aaPredicted RBP16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 FGD4Q96M96 766 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 SAR1AQ9NR31 198 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 SPATS2LQ9NUQ6 558 aaKnown RBP16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 ETAA1Q9NY74 926 aa16.49■□□□□ 0.23
TSPAN4-211ENST00000468468 A0A0G2JND7 137 aa16.48■□□□□ 0.23
TSPAN4-211ENST00000468468 RNF8O76064 485 aa16.48■□□□□ 0.23
TSPAN4-211ENST00000468468 RAD23BP54727 409 aa16.48■□□□□ 0.23
TSPAN4-211ENST00000468468 SYCP2LQ5T4T6 812 aa16.48■□□□□ 0.23
TSPAN4-211ENST00000468468 CDCA2Q69YH5 1023 aaPredicted RBP16.48■□□□□ 0.23
TSPAN4-211ENST00000468468 TRIM50Q86XT4 487 aa16.48■□□□□ 0.23
TSPAN4-211ENST00000468468 CMASQ8NFW8 434 aaPredicted RBP16.48■□□□□ 0.23
TSPAN4-211ENST00000468468 SPATA18Q8TC71 538 aa16.48■□□□□ 0.23
TSPAN4-211ENST00000468468 MICAL1Q8TDZ2 1067 aa16.48■□□□□ 0.23
TSPAN4-211ENST00000468468 TRIM55Q9BYV6 548 aa16.48■□□□□ 0.23
TSPAN4-211ENST00000468468 WDR35Q9P2L0 1181 aa16.48■□□□□ 0.23
TSPAN4-211ENST00000468468 IKBKGQ9Y6K9 419 aa16.48■□□□□ 0.23
TSPAN4-211ENST00000468468 IQANK1A0A1B0GTG1 560 aa16.48■□□□□ 0.23
TSPAN4-211ENST00000468468 TSHRP16473 764 aa16.48■□□□□ 0.23
TSPAN4-211ENST00000468468 PTK7Q13308 1070 aa16.48■□□□□ 0.23
TSPAN4-211ENST00000468468 CTC1Q2NKJ3 1217 aa16.48■□□□□ 0.23
TSPAN4-211ENST00000468468 WASHC2DQ5SRD0 308 aa16.48■□□□□ 0.23
TSPAN4-211ENST00000468468 ARMC3Q5W041 872 aa16.48■□□□□ 0.23
TSPAN4-211ENST00000468468 NPNTQ6UXI9 565 aa16.48■□□□□ 0.23
TSPAN4-211ENST00000468468 SEPT1Q8WYJ6 367 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms