RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 MYCBPAPQ8TBZ2 947 aa13.96□□□□□ -0.17
PTPN7-207ENST00000468385 RLN3Q8WXF3 142 aa13.96□□□□□ -0.17
PTPN7-207ENST00000468385 C8orf48Q96LL4 319 aa13.96□□□□□ -0.17
PTPN7-207ENST00000468385 FNBP1Q96RU3 617 aa13.96□□□□□ -0.17
PTPN7-207ENST00000468385 PNKPQ96T60 521 aa13.96□□□□□ -0.17
PTPN7-207ENST00000468385 SPEGQ15772 3267 aa13.95□□□□□ -0.18
PTPN7-207ENST00000468385 A0A087X0B3 334 aa13.95□□□□□ -0.18
PTPN7-207ENST00000468385 A0A0A0MRY4 1105 aa13.95□□□□□ -0.18
PTPN7-207ENST00000468385 F8VP50 259 aa13.95□□□□□ -0.18
PTPN7-207ENST00000468385 SCAMP3O14828 347 aaKnown RBP13.95□□□□□ -0.18
PTPN7-207ENST00000468385 KIAA0391O15091 583 aaKnown RBP13.95□□□□□ -0.18
PTPN7-207ENST00000468385 ALDH1A2O94788 518 aa13.95□□□□□ -0.18
PTPN7-207ENST00000468385 KAT7O95251 611 aa13.95□□□□□ -0.18
PTPN7-207ENST00000468385 KLF8O95600 359 aaPredicted RBP13.95□□□□□ -0.18
PTPN7-207ENST00000468385 TNNC2P02585 160 aa13.95□□□□□ -0.18
PTPN7-207ENST00000468385 TIE1P35590 1138 aa13.95□□□□□ -0.18
PTPN7-207ENST00000468385 TXLNAP40222 546 aa13.95□□□□□ -0.18
PTPN7-207ENST00000468385 KIR2DL1P43626 348 aaPredicted RBP13.95□□□□□ -0.18
PTPN7-207ENST00000468385 PPP3CCP48454 512 aa13.95□□□□□ -0.18
PTPN7-207ENST00000468385 CACNA2D1P54289 1103 aa13.95□□□□□ -0.18
PTPN7-207ENST00000468385 TAF10Q12962 218 aa13.95□□□□□ -0.18
PTPN7-207ENST00000468385 SURF1Q15526 300 aa13.95□□□□□ -0.18
PTPN7-207ENST00000468385 DUOXA2Q1HG44 320 aa13.95□□□□□ -0.18
PTPN7-207ENST00000468385 UAP1L1Q3KQV9 507 aa13.95□□□□□ -0.18
PTPN7-207ENST00000468385 HSF5Q4G112 596 aaPredicted RBP13.95□□□□□ -0.18
PTPN7-207ENST00000468385 TRIM61Q5EBN2 209 aa13.95□□□□□ -0.18
PTPN7-207ENST00000468385 MDH1BQ5I0G3 518 aa13.95□□□□□ -0.18
PTPN7-207ENST00000468385 EMC10Q5UCC4 262 aa13.95□□□□□ -0.18
PTPN7-207ENST00000468385 GLIS3Q8NEA6 775 aa13.95□□□□□ -0.18
PTPN7-207ENST00000468385 DEFB124Q8NES8 71 aa13.95□□□□□ -0.18
PTPN7-207ENST00000468385 GATA6Q92908 595 aa13.95□□□□□ -0.18
PTPN7-207ENST00000468385 MRPL45Q9BRJ2 306 aaKnown RBP13.95□□□□□ -0.18
PTPN7-207ENST00000468385 SCNM1Q9BWG6 230 aa13.95□□□□□ -0.18
PTPN7-207ENST00000468385 ZDHHC4Q9NPG8 344 aa13.95□□□□□ -0.18
PTPN7-207ENST00000468385 TMEM74BQ9NUR3 256 aa13.95□□□□□ -0.18
PTPN7-207ENST00000468385 TMEM30AQ9NV96 361 aa13.95□□□□□ -0.18
PTPN7-207ENST00000468385 PANK4Q9NVE7 773 aa13.95□□□□□ -0.18
PTPN7-207ENST00000468385 SMPD4Q9NXE4 827 aa13.95□□□□□ -0.18
PTPN7-207ENST00000468385 EHD2Q9NZN4 543 aa13.95□□□□□ -0.18
PTPN7-207ENST00000468385 MBD1Q9UIS9 605 aaPredicted RBP13.95□□□□□ -0.18
PTPN7-207ENST00000468385 R3HCC1Q9Y3T6 440 aaKnown RBP13.95□□□□□ -0.18
PTPN7-207ENST00000468385 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.94□□□□□ -0.18
PTPN7-207ENST00000468385 VPS37CA5D8V6 355 aaPredicted RBP13.94□□□□□ -0.18
PTPN7-207ENST00000468385 ZNF233A6NK53 670 aa13.94□□□□□ -0.18
PTPN7-207ENST00000468385 SLC9A3R1O14745 358 aaPredicted RBP13.94□□□□□ -0.18
PTPN7-207ENST00000468385 TNFRSF10BO14763 440 aa13.94□□□□□ -0.18
PTPN7-207ENST00000468385 ADAM23O75077 832 aa13.94□□□□□ -0.18
PTPN7-207ENST00000468385 APODP05090 189 aa13.94□□□□□ -0.18
PTPN7-207ENST00000468385 PTGER3P43115 390 aa13.94□□□□□ -0.18
PTPN7-207ENST00000468385 LMAN2Q12907 356 aa13.94□□□□□ -0.18
PTPN7-207ENST00000468385 RESTQ13127 1097 aa13.94□□□□□ -0.18
PTPN7-207ENST00000468385 MAP7D1Q3KQU3 841 aa13.94□□□□□ -0.18
PTPN7-207ENST00000468385 CCDC73Q6ZRK6 1079 aa13.94□□□□□ -0.18
PTPN7-207ENST00000468385 ARMCX6Q7L4S7 300 aa13.94□□□□□ -0.18
PTPN7-207ENST00000468385 LPCAT2Q7L5N7 544 aa13.94□□□□□ -0.18
PTPN7-207ENST00000468385 WDR49Q8IV35 697 aa13.94□□□□□ -0.18
PTPN7-207ENST00000468385 TMEFF1Q8IYR6 380 aa13.94□□□□□ -0.18
PTPN7-207ENST00000468385 PHTF2Q8N3S3 785 aa13.94□□□□□ -0.18
PTPN7-207ENST00000468385 WHAMMQ8TF30 809 aa13.94□□□□□ -0.18
PTPN7-207ENST00000468385 MMS19Q96T76 1030 aa13.94□□□□□ -0.18
PTPN7-207ENST00000468385 PANK2Q9BZ23 570 aa13.94□□□□□ -0.18
PTPN7-207ENST00000468385 CEP295Q9C0D2 2601 aa13.94□□□□□ -0.18
PTPN7-207ENST00000468385 POLMQ9NP87 494 aaPredicted RBP13.94□□□□□ -0.18
PTPN7-207ENST00000468385 CFAP97Q9P2B7 532 aa13.94□□□□□ -0.18
PTPN7-207ENST00000468385 TNRC6BQ9UPQ9 1833 aaKnown RBP13.94□□□□□ -0.18
PTPN7-207ENST00000468385 TACC1O75410 805 aa13.93□□□□□ -0.18
PTPN7-207ENST00000468385 ABL1P00519 1130 aa13.93□□□□□ -0.18
PTPN7-207ENST00000468385 CST3P01034 146 aaPredicted RBP13.93□□□□□ -0.18
PTPN7-207ENST00000468385 MBL2P11226 248 aaPredicted RBP13.93□□□□□ -0.18
PTPN7-207ENST00000468385 ADH5P11766 374 aa13.93□□□□□ -0.18
PTPN7-207ENST00000468385 HOXD13P35453 343 aa13.93□□□□□ -0.18
PTPN7-207ENST00000468385 GNL1P36915 607 aaPredicted RBP13.93□□□□□ -0.18
PTPN7-207ENST00000468385 STAT6P42226 847 aa13.93□□□□□ -0.18
PTPN7-207ENST00000468385 GRIA2P42262 883 aa13.93□□□□□ -0.18
PTPN7-207ENST00000468385 KDSRQ06136 332 aa13.93□□□□□ -0.18
PTPN7-207ENST00000468385 C1QBPQ07021 282 aaKnown RBP13.93□□□□□ -0.18
PTPN7-207ENST00000468385 SPDYCQ5MJ68 293 aa13.93□□□□□ -0.18
PTPN7-207ENST00000468385 EOGTQ5NDL2 527 aa13.93□□□□□ -0.18
PTPN7-207ENST00000468385 PEAR1Q5VY43 1037 aaPredicted RBP13.93□□□□□ -0.18
PTPN7-207ENST00000468385 TDRD10Q5VZ19 366 aaKnown RBP13.93□□□□□ -0.18
PTPN7-207ENST00000468385 FAM173BQ6P4H8 233 aa13.93□□□□□ -0.18
PTPN7-207ENST00000468385 HS2ST1Q7LGA3 356 aa13.93□□□□□ -0.18
PTPN7-207ENST00000468385 TRAPPC11Q7Z392 1133 aa13.93□□□□□ -0.18
PTPN7-207ENST00000468385 SYT12Q8IV01 421 aa13.93□□□□□ -0.18
PTPN7-207ENST00000468385 HPS3Q969F9 1004 aa13.93□□□□□ -0.18
PTPN7-207ENST00000468385 SPACA7Q96KW9 195 aa13.93□□□□□ -0.18
PTPN7-207ENST00000468385 NUSAP1Q9BXS6 441 aaKnown RBP13.93□□□□□ -0.18
PTPN7-207ENST00000468385 ZNF518BQ9C0D4 1074 aa13.93□□□□□ -0.18
PTPN7-207ENST00000468385 DPEP3Q9H4B8 488 aa13.93□□□□□ -0.18
PTPN7-207ENST00000468385 ARHGEF4Q9NR80 690 aa13.93□□□□□ -0.18
PTPN7-207ENST00000468385 HSPBP1Q9NZL4 362 aa13.93□□□□□ -0.18
PTPN7-207ENST00000468385 CIZ1Q9ULV3 898 aaPredicted RBP13.93□□□□□ -0.18
PTPN7-207ENST00000468385 ATXN2Q99700 1313 aaKnown RBP13.92□□□□□ -0.18
PTPN7-207ENST00000468385 TMEM8BA6NDV4 472 aa13.92□□□□□ -0.18
PTPN7-207ENST00000468385 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.92□□□□□ -0.18
PTPN7-207ENST00000468385 ZZEF1O43149 2961 aa13.92□□□□□ -0.18
PTPN7-207ENST00000468385 MAP3K13O43283 966 aa13.92□□□□□ -0.18
PTPN7-207ENST00000468385 ADH1CP00326 375 aa13.92□□□□□ -0.18
PTPN7-207ENST00000468385 ENGP17813 658 aa13.92□□□□□ -0.18
PTPN7-207ENST00000468385 PTPN1P18031 435 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms