RNA–Protein interactions for RNA: ENST00000467464.1

PTPRF-211, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-211ENST00000467464 ORC1Q13415 861 aa12.72□□□□□ -0.37
PTPRF-211ENST00000467464 PPP2R5DQ14738 602 aa12.72□□□□□ -0.37
PTPRF-211ENST00000467464 CEP135Q66GS9 1140 aa12.72□□□□□ -0.37
PTPRF-211ENST00000467464 CC2D1AQ6P1N0 951 aaPredicted RBP12.72□□□□□ -0.37
PTPRF-211ENST00000467464 WDR5BQ86VZ2 330 aa12.72□□□□□ -0.37
PTPRF-211ENST00000467464 LONP2Q86WA8 852 aa12.72□□□□□ -0.37
PTPRF-211ENST00000467464 CRYBG2Q8N1P7 616 aa12.72□□□□□ -0.37
PTPRF-211ENST00000467464 CPA6Q8N4T0 437 aa12.72□□□□□ -0.37
PTPRF-211ENST00000467464 SCAMP5Q8TAC9 235 aa12.72□□□□□ -0.37
PTPRF-211ENST00000467464 ATP2A3Q93084 1043 aa12.72□□□□□ -0.37
PTPRF-211ENST00000467464 TWNKQ96RR1 684 aa12.72□□□□□ -0.37
PTPRF-211ENST00000467464 SMOQ99835 787 aa12.72□□□□□ -0.37
PTPRF-211ENST00000467464 P2RY13Q9BPV8 354 aa12.72□□□□□ -0.37
PTPRF-211ENST00000467464 NCDNQ9UBB6 729 aa12.72□□□□□ -0.37
PTPRF-211ENST00000467464 MAPK8IP1Q9UQF2 711 aa12.72□□□□□ -0.37
PTPRF-211ENST00000467464 PTPRDP23468 1912 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 CALUO43852 315 aaPredicted RBP12.71□□□□□ -0.37
PTPRF-211ENST00000467464 RNF40O75150 1001 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 BEST1O76090 585 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 ZDHHC11BP0C7U3 371 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 CCDC130P13994 396 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 NR2F2P24468 414 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 OPRD1P41143 372 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 PPP3CCP48454 512 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 IFNAR2P48551 515 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 VAMP7P51809 220 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 NDST1P52848 882 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 SLC5A3P53794 718 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 ENPEPQ07075 957 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 INCA1Q0VD86 236 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 MESP2Q0VG99 397 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 LPAL2Q16609 132 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 SGSM1Q2NKQ1 1148 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 SNX30Q5VWJ9 437 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 ACOT1Q86TX2 421 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 FMR1NBQ8N0W7 255 aaPredicted RBP12.71□□□□□ -0.37
PTPRF-211ENST00000467464 NUP93Q8N1F7 819 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 KIAA1958Q8N8K9 716 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 TAS1R2Q8TE23 839 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 OVCA2Q8WZ82 227 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 TAF4BQ92750 862 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 TNIP3Q96KP6 325 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 HINFPQ9BQA5 517 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 CSNK1G1Q9HCP0 422 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 DMAP1Q9NPF5 467 aaPredicted RBP12.71□□□□□ -0.37
PTPRF-211ENST00000467464 DLL3Q9NYJ7 618 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 ATP6V1DQ9Y5K8 247 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 CPQQ9Y646 472 aa12.71□□□□□ -0.37
PTPRF-211ENST00000467464 DENND4CQ5VZ89 1909 aa12.7□□□□□ -0.38
PTPRF-211ENST00000467464 ANTXRLA6NF34 631 aa12.7□□□□□ -0.38
PTPRF-211ENST00000467464 HHLA1C9JL84 531 aa12.7□□□□□ -0.38
PTPRF-211ENST00000467464 COCHO43405 550 aa12.7□□□□□ -0.38
PTPRF-211ENST00000467464 CYP17A1P05093 508 aa12.7□□□□□ -0.38
PTPRF-211ENST00000467464 DRD1P21728 446 aa12.7□□□□□ -0.38
PTPRF-211ENST00000467464 YWHAQP27348 245 aa12.7□□□□□ -0.38
PTPRF-211ENST00000467464 PIK3CAP42336 1068 aa12.7□□□□□ -0.38
PTPRF-211ENST00000467464 GCLMP48507 274 aa12.7□□□□□ -0.38
PTPRF-211ENST00000467464 PDE6CP51160 858 aa12.7□□□□□ -0.38
PTPRF-211ENST00000467464 HEATR6Q6AI08 1181 aaKnown RBP12.7□□□□□ -0.38
PTPRF-211ENST00000467464 LAIR1Q6GTX8 287 aa12.7□□□□□ -0.38
PTPRF-211ENST00000467464 ERMP1Q7Z2K6 904 aa12.7□□□□□ -0.38
PTPRF-211ENST00000467464 GPRIN1Q7Z2K8 1008 aa12.7□□□□□ -0.38
PTPRF-211ENST00000467464 UNC93AQ86WB7 457 aa12.7□□□□□ -0.38
PTPRF-211ENST00000467464 FAM186BQ8IYM0 893 aa12.7□□□□□ -0.38
PTPRF-211ENST00000467464 SMYD4Q8IYR2 804 aaPredicted RBP12.7□□□□□ -0.38
PTPRF-211ENST00000467464 C12orf29Q8N999 325 aa12.7□□□□□ -0.38
PTPRF-211ENST00000467464 ENGASEQ8NFI3 743 aa12.7□□□□□ -0.38
PTPRF-211ENST00000467464 WHAMMQ8TF30 809 aa12.7□□□□□ -0.38
PTPRF-211ENST00000467464 CD101Q93033 1021 aa12.7□□□□□ -0.38
PTPRF-211ENST00000467464 SMARCD1Q96GM5 515 aa12.7□□□□□ -0.38
PTPRF-211ENST00000467464 KRT82Q9NSB4 513 aa12.7□□□□□ -0.38
PTPRF-211ENST00000467464 SMPD4Q9NXE4 827 aa12.7□□□□□ -0.38
PTPRF-211ENST00000467464 EHD2Q9NZN4 543 aa12.7□□□□□ -0.38
PTPRF-211ENST00000467464 FRMD4BQ9Y2L6 1034 aa12.7□□□□□ -0.38
PTPRF-211ENST00000467464 EP300Q09472 2414 aaPredicted RBP12.7□□□□□ -0.38
PTPRF-211ENST00000467464 PTPRZ1P23471 2315 aaPredicted RBP12.7□□□□□ -0.38
PTPRF-211ENST00000467464 ATP8B3O60423 1300 aa12.69□□□□□ -0.38
PTPRF-211ENST00000467464 GREB1Q4ZG55 1949 aa12.69□□□□□ -0.38
PTPRF-211ENST00000467464 SCAMP3O14828 347 aaKnown RBP12.69□□□□□ -0.38
PTPRF-211ENST00000467464 AP1G2O75843 785 aa12.69□□□□□ -0.38
PTPRF-211ENST00000467464 RTN3O95197 1032 aaPredicted RBP12.69□□□□□ -0.38
PTPRF-211ENST00000467464 KIF20AO95235 890 aa12.69□□□□□ -0.38
PTPRF-211ENST00000467464 CNR2P34972 360 aa12.69□□□□□ -0.38
PTPRF-211ENST00000467464 PXNP49023 591 aaPredicted RBP12.69□□□□□ -0.38
PTPRF-211ENST00000467464 IFRD2Q12894 506 aaPredicted RBP12.69□□□□□ -0.38
PTPRF-211ENST00000467464 PNOCQ13519 176 aa12.69□□□□□ -0.38
PTPRF-211ENST00000467464 EDRF1Q3B7T1 1238 aa12.69□□□□□ -0.38
PTPRF-211ENST00000467464 FBXO43Q4G163 708 aa12.69□□□□□ -0.38
PTPRF-211ENST00000467464 COBLL1Q53SF7 1204 aa12.69□□□□□ -0.38
PTPRF-211ENST00000467464 INTS8Q75QN2 995 aaKnown RBP12.69□□□□□ -0.38
PTPRF-211ENST00000467464 FILIP1Q7Z7B0 1213 aa12.69□□□□□ -0.38
PTPRF-211ENST00000467464 ZC3H3Q8IXZ2 948 aaKnown RBP12.69□□□□□ -0.38
PTPRF-211ENST00000467464 ADGRG2Q8IZP9 1017 aa12.69□□□□□ -0.38
PTPRF-211ENST00000467464 TTC16Q8NEE8 873 aa12.69□□□□□ -0.38
PTPRF-211ENST00000467464 PDZD8Q8NEN9 1154 aa12.69□□□□□ -0.38
PTPRF-211ENST00000467464 SPATA20Q8TB22 786 aa12.69□□□□□ -0.38
PTPRF-211ENST00000467464 SLC2A14Q8TDB8 520 aa12.69□□□□□ -0.38
PTPRF-211ENST00000467464 SEMA4DQ92854 862 aa12.69□□□□□ -0.38
PTPRF-211ENST00000467464 FBXO32Q969P5 355 aa12.69□□□□□ -0.38
PTPRF-211ENST00000467464 WBP2Q969T9 261 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms