RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 MYLPFQ96A32 169 aa13.04□□□□□ -0.32
UBR4-211ENST00000467272 SAAL1Q96ER3 474 aa13.04□□□□□ -0.32
UBR4-211ENST00000467272 C8orf48Q96LL4 319 aa13.04□□□□□ -0.32
UBR4-211ENST00000467272 PNKPQ96T60 521 aa13.04□□□□□ -0.32
UBR4-211ENST00000467272 FGFBP2Q9BYJ0 223 aa13.04□□□□□ -0.32
UBR4-211ENST00000467272 OLFML3Q9NRN5 406 aa13.04□□□□□ -0.32
UBR4-211ENST00000467272 CDH9Q9ULB4 789 aa13.04□□□□□ -0.32
UBR4-211ENST00000467272 HELZP42694 1942 aaKnown RBP13.03□□□□□ -0.32
UBR4-211ENST00000467272 SPAARA0A1B0GVQ0 90 aa13.03□□□□□ -0.32
UBR4-211ENST00000467272 MYMKA6NI61 221 aa13.03□□□□□ -0.32
UBR4-211ENST00000467272 ALDH1A2O94788 518 aa13.03□□□□□ -0.32
UBR4-211ENST00000467272 KLF8O95600 359 aaPredicted RBP13.03□□□□□ -0.32
UBR4-211ENST00000467272 CD59P13987 128 aa13.03□□□□□ -0.32
UBR4-211ENST00000467272 WARSP23381 471 aaKnown RBP13.03□□□□□ -0.32
UBR4-211ENST00000467272 ITPKAP23677 461 aa13.03□□□□□ -0.32
UBR4-211ENST00000467272 GRIA2P42262 883 aa13.03□□□□□ -0.32
UBR4-211ENST00000467272 CACNA2D1P54289 1103 aa13.03□□□□□ -0.32
UBR4-211ENST00000467272 UAP1L1Q3KQV9 507 aa13.03□□□□□ -0.32
UBR4-211ENST00000467272 MCTP1Q6DN14 999 aa13.03□□□□□ -0.32
UBR4-211ENST00000467272 C4orf50Q6ZRC1 276 aa13.03□□□□□ -0.32
UBR4-211ENST00000467272 DENND5BQ6ZUT9 1274 aa13.03□□□□□ -0.32
UBR4-211ENST00000467272 SCN4BQ8IWT1 228 aa13.03□□□□□ -0.32
UBR4-211ENST00000467272 MYCBPAPQ8TBZ2 947 aa13.03□□□□□ -0.32
UBR4-211ENST00000467272 CACTINQ8WUQ7 758 aaKnown RBP13.03□□□□□ -0.32
UBR4-211ENST00000467272 SYT15Q9BQS2 421 aa13.03□□□□□ -0.32
UBR4-211ENST00000467272 CBWD1Q9BRT8 395 aa13.03□□□□□ -0.32
UBR4-211ENST00000467272 MTMR12Q9C0I1 747 aa13.03□□□□□ -0.32
UBR4-211ENST00000467272 ZHX3Q9H4I2 956 aa13.03□□□□□ -0.32
UBR4-211ENST00000467272 PDE11AQ9HCR9 933 aa13.03□□□□□ -0.32
UBR4-211ENST00000467272 INTS13Q9NVM9 706 aa13.03□□□□□ -0.32
UBR4-211ENST00000467272 DNAAF2Q9NVR5 837 aaKnown RBP13.03□□□□□ -0.32
UBR4-211ENST00000467272 RBAKQ9NYW8 714 aaPredicted RBP13.03□□□□□ -0.32
UBR4-211ENST00000467272 TRPM5Q9NZQ8 1165 aa13.03□□□□□ -0.32
UBR4-211ENST00000467272 THADAQ6YHU6 1953 aa13.03□□□□□ -0.32
UBR4-211ENST00000467272 APC2O95996 2303 aa13.02□□□□□ -0.32
UBR4-211ENST00000467272 TCHHQ07283 1943 aa13.02□□□□□ -0.32
UBR4-211ENST00000467272 ZNF638Q14966 1978 aaKnown RBP13.02□□□□□ -0.32
UBR4-211ENST00000467272 A0A1W2PQF6 199 aa13.02□□□□□ -0.33
UBR4-211ENST00000467272 H0Y626 953 aa13.02□□□□□ -0.33
UBR4-211ENST00000467272 GREM1O60565 184 aa13.02□□□□□ -0.33
UBR4-211ENST00000467272 TRIM16O95361 564 aa13.02□□□□□ -0.33
UBR4-211ENST00000467272 LDHAP00338 332 aaKnown RBP13.02□□□□□ -0.33
UBR4-211ENST00000467272 KRT18P05783 430 aaKnown RBP13.02□□□□□ -0.33
UBR4-211ENST00000467272 SERPINF2P08697 491 aa13.02□□□□□ -0.33
UBR4-211ENST00000467272 BDNFP23560 247 aa13.02□□□□□ -0.33
UBR4-211ENST00000467272 SIM1P81133 766 aaPredicted RBP13.02□□□□□ -0.33
UBR4-211ENST00000467272 SNX30Q5VWJ9 437 aa13.02□□□□□ -0.33
UBR4-211ENST00000467272 LYSMD4Q5XG99 296 aa13.02□□□□□ -0.33
UBR4-211ENST00000467272 KIAA1211LQ6NV74 962 aa13.02□□□□□ -0.33
UBR4-211ENST00000467272 PROSER1Q86XN7 944 aa13.02□□□□□ -0.33
UBR4-211ENST00000467272 PIAS4Q8N2W9 510 aaPredicted RBP13.02□□□□□ -0.33
UBR4-211ENST00000467272 KRI1Q8N9T8 703 aaKnown RBP13.02□□□□□ -0.33
UBR4-211ENST00000467272 OR5B17Q8NGF7 314 aa13.02□□□□□ -0.33
UBR4-211ENST00000467272 PCED1BQ96HM7 432 aa13.02□□□□□ -0.33
UBR4-211ENST00000467272 EPSTI1Q96J88 318 aa13.02□□□□□ -0.33
UBR4-211ENST00000467272 ACCSQ96QU6 501 aa13.02□□□□□ -0.33
UBR4-211ENST00000467272 NUSAP1Q9BXS6 441 aaKnown RBP13.02□□□□□ -0.33
UBR4-211ENST00000467272 SLC32A1Q9H598 525 aa13.02□□□□□ -0.33
UBR4-211ENST00000467272 IL37Q9NZH6 218 aa13.02□□□□□ -0.33
UBR4-211ENST00000467272 MAGEC2Q9UBF1 373 aaPredicted RBP13.02□□□□□ -0.33
UBR4-211ENST00000467272 SLC6A14Q9UN76 642 aa13.02□□□□□ -0.33
UBR4-211ENST00000467272 LHX6Q9UPM6 363 aa13.02□□□□□ -0.33
UBR4-211ENST00000467272 STARD13Q9Y3M8 1113 aa13.02□□□□□ -0.33
UBR4-211ENST00000467272 GPSM3Q9Y4H4 160 aa13.02□□□□□ -0.33
UBR4-211ENST00000467272 CPQQ9Y646 472 aa13.02□□□□□ -0.33
UBR4-211ENST00000467272 E2F8A0AVK6 867 aa13.01□□□□□ -0.33
UBR4-211ENST00000467272 SLC9A3R1O14745 358 aaPredicted RBP13.01□□□□□ -0.33
UBR4-211ENST00000467272 HOXC11O43248 304 aaPredicted RBP13.01□□□□□ -0.33
UBR4-211ENST00000467272 BMP15O95972 392 aa13.01□□□□□ -0.33
UBR4-211ENST00000467272 FAM163BP0C2L3 166 aa13.01□□□□□ -0.33
UBR4-211ENST00000467272 GAP43P17677 238 aa13.01□□□□□ -0.33
UBR4-211ENST00000467272 GABRG2P18507 467 aa13.01□□□□□ -0.33
UBR4-211ENST00000467272 HOXD13P35453 343 aa13.01□□□□□ -0.33
UBR4-211ENST00000467272 TIE1P35590 1138 aa13.01□□□□□ -0.33
UBR4-211ENST00000467272 MAPK8P45983 427 aa13.01□□□□□ -0.33
UBR4-211ENST00000467272 PSMC1P62191 440 aaKnown RBP13.01□□□□□ -0.33
UBR4-211ENST00000467272 MAPRE1Q15691 268 aaKnown RBP13.01□□□□□ -0.33
UBR4-211ENST00000467272 EOGTQ5NDL2 527 aa13.01□□□□□ -0.33
UBR4-211ENST00000467272 DYMQ7RTS9 669 aa13.01□□□□□ -0.33
UBR4-211ENST00000467272 MIB1Q86YT6 1006 aa13.01□□□□□ -0.33
UBR4-211ENST00000467272 CEP76Q8TAP6 659 aa13.01□□□□□ -0.33
UBR4-211ENST00000467272 HPDLQ96IR7 371 aa13.01□□□□□ -0.33
UBR4-211ENST00000467272 SPACA7Q96KW9 195 aa13.01□□□□□ -0.33
UBR4-211ENST00000467272 MRPL44Q9H9J2 332 aaKnown RBP13.01□□□□□ -0.33
UBR4-211ENST00000467272 POLMQ9NP87 494 aaPredicted RBP13.01□□□□□ -0.33
UBR4-211ENST00000467272 FSCN3Q9NQT6 498 aa13.01□□□□□ -0.33
UBR4-211ENST00000467272 CFAP97Q9P2B7 532 aa13.01□□□□□ -0.33
UBR4-211ENST00000467272 STK17AQ9UEE5 414 aa13.01□□□□□ -0.33
UBR4-211ENST00000467272 EXOC7Q9UPT5 735 aa13.01□□□□□ -0.33
UBR4-211ENST00000467272 KIF3AQ9Y496 699 aa13.01□□□□□ -0.33
UBR4-211ENST00000467272 ATXN2Q99700 1313 aaKnown RBP13□□□□□ -0.33
UBR4-211ENST00000467272 FAM92AA1XBS5 289 aa13□□□□□ -0.33
UBR4-211ENST00000467272 GOLGA8IPA6NC78 632 aa13□□□□□ -0.33
UBR4-211ENST00000467272 GOLGA8JA6NMD2 632 aa13□□□□□ -0.33
UBR4-211ENST00000467272 F8VP50 259 aa13□□□□□ -0.33
UBR4-211ENST00000467272 TRIM66O15016 1216 aa13□□□□□ -0.33
UBR4-211ENST00000467272 TACC1O75410 805 aa13□□□□□ -0.33
UBR4-211ENST00000467272 CD2BP2O95400 341 aaKnown RBP13□□□□□ -0.33
UBR4-211ENST00000467272 ADH1CP00326 375 aa13□□□□□ -0.33
UBR4-211ENST00000467272 APODP05090 189 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms