RNA–Protein interactions for RNA: ENST00000465705.3

TMCO1-204, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5

Gene TMCO1, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-204ENST00000465705 SLC5A9Q2M3M2 681 aa11.95□□□□□ -0.5
TMCO1-204ENST00000465705 SMYD5Q6GMV2 418 aa11.95□□□□□ -0.5
TMCO1-204ENST00000465705 DPY19L2P1Q6NXN4 242 aa11.95□□□□□ -0.5
TMCO1-204ENST00000465705 CLEC20AQ6ZU45 233 aa11.95□□□□□ -0.5
TMCO1-204ENST00000465705 DENND5BQ6ZUT9 1274 aa11.95□□□□□ -0.5
TMCO1-204ENST00000465705 OTOP3Q7RTS5 596 aa11.95□□□□□ -0.5
TMCO1-204ENST00000465705 TMC8Q8IU68 726 aa11.95□□□□□ -0.5
TMCO1-204ENST00000465705 ADHFE1Q8IWW8 467 aa11.95□□□□□ -0.5
TMCO1-204ENST00000465705 ING5Q8WYH8 240 aa11.95□□□□□ -0.5
TMCO1-204ENST00000465705 ACSF2Q96CM8 615 aaPredicted RBP11.95□□□□□ -0.5
TMCO1-204ENST00000465705 KCNK16Q96T55 309 aa11.95□□□□□ -0.5
TMCO1-204ENST00000465705 AVENQ9NQS1 362 aaPredicted RBP11.95□□□□□ -0.5
TMCO1-204ENST00000465705 TMEM30AQ9NV96 361 aa11.95□□□□□ -0.5
TMCO1-204ENST00000465705 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.95□□□□□ -0.5
TMCO1-204ENST00000465705 UXTQ9UBK9 157 aaPredicted RBP11.95□□□□□ -0.5
TMCO1-204ENST00000465705 TSPAN16Q9UKR8 245 aa11.95□□□□□ -0.5
TMCO1-204ENST00000465705 USTQ9Y2C2 406 aa11.95□□□□□ -0.5
TMCO1-204ENST00000465705 A0A1W2PQC6 194 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 A0A1W2PRU2 124 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 F8VZ95 297 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 O00370 1275 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 EPHB6O15197 1021 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 MED7O43513 233 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 BEST1O76090 585 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 PNMA6AP0CW24 399 aaPredicted RBP11.94□□□□□ -0.5
TMCO1-204ENST00000465705 HMGA1P17096 107 aaKnown RBP11.94□□□□□ -0.5
TMCO1-204ENST00000465705 GABRR2P28476 465 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 CDC25CP30307 473 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 SLC5A3P53794 718 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 BCAT1P54687 386 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 ZP2Q05996 745 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 IFRD2Q12894 506 aaPredicted RBP11.94□□□□□ -0.5
TMCO1-204ENST00000465705 STILQ15468 1287 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 PRSS36Q5K4E3 855 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 NUP93Q8N1F7 819 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 ANKRD52Q8NB46 1076 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 ZMIZ2Q8NF64 920 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 ITFG1Q8TB96 612 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 ADAMTS19Q8TE59 1207 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 TFAP2BQ92481 460 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 TRMT2BQ96GJ1 504 aaKnown RBP11.94□□□□□ -0.5
TMCO1-204ENST00000465705 NAP1L5Q96NT1 182 aaPredicted RBP11.94□□□□□ -0.5
TMCO1-204ENST00000465705 SPAG5Q96R06 1193 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 SMOQ99835 787 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 NAA15Q9BXJ9 866 aaKnown RBP11.94□□□□□ -0.5
TMCO1-204ENST00000465705 LRRC3Q9BY71 257 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 DUSP16Q9BY84 665 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 STK33Q9BYT3 514 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 CSNK1G1Q9HCP0 422 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 ZNF334Q9HCZ1 680 aaPredicted RBP11.94□□□□□ -0.5
TMCO1-204ENST00000465705 PNPLA8Q9NP80 782 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 NLRC4Q9NPP4 1024 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 IFNKQ9P0W0 207 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 CDH7Q9ULB5 785 aa11.94□□□□□ -0.5
TMCO1-204ENST00000465705 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.94□□□□□ -0.5
TMCO1-204ENST00000465705 C2CD4DB7Z1M9 353 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 M0QYV0 167 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 FOXN3O00409 490 aaPredicted RBP11.93□□□□□ -0.5
TMCO1-204ENST00000465705 CYP26A1O43174 497 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 THAP12O43422 761 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 MICAL2O94851 1124 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 RTN3O95197 1032 aaPredicted RBP11.93□□□□□ -0.5
TMCO1-204ENST00000465705 CALCAP01258 141 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 SETSIPP0DME0 302 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 GJA1P17302 382 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 CEBPBP17676 345 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 SSTR3P32745 418 aaPredicted RBP11.93□□□□□ -0.5
TMCO1-204ENST00000465705 CCR2P41597 374 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 PTK2Q05397 1052 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 BST2Q10589 180 aaKnown RBP11.93□□□□□ -0.5
TMCO1-204ENST00000465705 NR1I3Q14994 352 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 CNGA2Q16280 664 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 PTPN21Q16825 1174 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 ARHGAP15Q53QZ3 475 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 LCLAT1Q6UWP7 414 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 CACNA2D4Q7Z3S7 1137 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 TTC30AQ86WT1 665 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 NPAS3Q8IXF0 933 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 FAM71AQ8IYT1 594 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 SHKBP1Q8TBC3 707 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 FGF13Q92913 245 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 TCEAL4Q96EI5 215 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 MYRFLQ96LU7 910 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 SLITRK1Q96PX8 696 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 ZSWIM1Q9BR11 485 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 GPR88Q9GZN0 384 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 ATXN3LQ9H3M9 355 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 SLITRK6Q9H5Y7 841 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 ZFP37Q9Y6Q3 630 aaPredicted RBP11.93□□□□□ -0.5
TMCO1-204ENST00000465705 PATJQ8NI35 1801 aa11.93□□□□□ -0.5
TMCO1-204ENST00000465705 CBFA2T2O43439 604 aa11.92□□□□□ -0.5
TMCO1-204ENST00000465705 YWHAQP27348 245 aa11.92□□□□□ -0.5
TMCO1-204ENST00000465705 STAT1P42224 750 aa11.92□□□□□ -0.5
TMCO1-204ENST00000465705 PDE6CP51160 858 aa11.92□□□□□ -0.5
TMCO1-204ENST00000465705 BPIFB4P59827 614 aa11.92□□□□□ -0.5
TMCO1-204ENST00000465705 USP46P62068 366 aa11.92□□□□□ -0.5
TMCO1-204ENST00000465705 PDE4CQ08493 712 aa11.92□□□□□ -0.5
TMCO1-204ENST00000465705 TEAD2Q15562 447 aa11.92□□□□□ -0.5
TMCO1-204ENST00000465705 SWT1Q5T5J6 900 aaKnown RBP11.92□□□□□ -0.5
TMCO1-204ENST00000465705 GAREM2Q75VX8 874 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms